Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0844
         (668 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13070-15|AAC46646.1|  366|Caenorhabditis elegans Hypothetical p...    84   1e-16
D83739-1|BAA12092.1|  366|Caenorhabditis elegans aldolase Ce2 pr...    84   1e-16
Z81115-1|CAB03291.1|  365|Caenorhabditis elegans Hypothetical pr...    79   2e-15
D83738-1|BAA12091.1|  366|Caenorhabditis elegans aldolase Ce1 pr...    79   2e-15
Z93373-3|CAD54120.1|  449|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z83245-12|CAD54180.1|  449|Caenorhabditis elegans Hypothetical p...    27   9.1  

>U13070-15|AAC46646.1|  366|Caenorhabditis elegans Hypothetical
           protein F01F1.12a protein.
          Length = 366

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 42/66 (63%), Positives = 52/66 (78%)
 Frame = +3

Query: 57  TFSYGRALQASVLRAWGGKTENILAGQQELIKRAKANGLAAVGKYVAGSIPSLAASKSNF 236
           TFSYGRALQASVL+AWGGK ENI A Q+ L+ R+KANG A++GKY AG   + AA++S F
Sbjct: 302 TFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGKY-AGEDAAGAAAESLF 360

Query: 237 VKSHAY 254
           V  H+Y
Sbjct: 361 VAKHSY 366


>D83739-1|BAA12092.1|  366|Caenorhabditis elegans aldolase Ce2
           protein.
          Length = 366

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 42/66 (63%), Positives = 52/66 (78%)
 Frame = +3

Query: 57  TFSYGRALQASVLRAWGGKTENILAGQQELIKRAKANGLAAVGKYVAGSIPSLAASKSNF 236
           TFSYGRALQASVL+AWGGK ENI A Q+ L+ R+KANG A++GKY AG   + AA++S F
Sbjct: 302 TFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGKY-AGEDAAGAAAESLF 360

Query: 237 VKSHAY 254
           V  H+Y
Sbjct: 361 VAKHSY 366


>Z81115-1|CAB03291.1|  365|Caenorhabditis elegans Hypothetical
           protein T05D4.1 protein.
          Length = 365

 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 38/66 (57%), Positives = 46/66 (69%)
 Frame = +3

Query: 57  TFSYGRALQASVLRAWGGKTENILAGQQELIKRAKANGLAAVGKYVAGSIPSLAASKSNF 236
           TFSYGRALQAS L  W GK ENI A Q+ L+ RA+ N LA+VGKY   +    AAS+S F
Sbjct: 300 TFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLF 359

Query: 237 VKSHAY 254
           V +H+Y
Sbjct: 360 VANHSY 365



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 1   ASVHLNAINAVDLKRPWVRRSATGAPSRLRCSAPGEGR 114
           A+++LNAIN V  K+PW    + G   +  C A   G+
Sbjct: 281 ATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGK 318


>D83738-1|BAA12091.1|  366|Caenorhabditis elegans aldolase Ce1
           protein.
          Length = 366

 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 38/66 (57%), Positives = 46/66 (69%)
 Frame = +3

Query: 57  TFSYGRALQASVLRAWGGKTENILAGQQELIKRAKANGLAAVGKYVAGSIPSLAASKSNF 236
           TFSYGRALQAS L  W GK ENI A Q+ L+ RA+ N LA+VGKY   +    AAS+S F
Sbjct: 301 TFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLF 360

Query: 237 VKSHAY 254
           V +H+Y
Sbjct: 361 VANHSY 366



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 1   ASVHLNAINAVDLKRPWVRRSATGAPSRLRCSAPGEGR 114
           A+++LNAIN V  K+PW    + G   +  C A   G+
Sbjct: 282 ATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGK 319


>Z93373-3|CAD54120.1|  449|Caenorhabditis elegans Hypothetical
           protein ZK131.11b protein.
          Length = 449

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
 Frame = +1

Query: 79  SRLRCSAPGEGRPRTFSPDSRS*SSVLRPTVSQQSANTLPALFLRWPLLNRTLSNLTLIN 258
           SRL+CS+P      T +  +    S L  T S    +TL ++  R   L  +  NL+ I+
Sbjct: 45  SRLKCSSPELHHLSTVAATASERGSQLTATSSTLGPSTLLSVDKRHSRLGESSPNLSRIH 104

Query: 259 EDELTDSNIRLYLKTKQKKSFL--IQFCKTV 345
               T  ++ L  K  Q   F    ++C+ V
Sbjct: 105 HTH-TQLSLGLPNKMNQTNDFFSSTEYCQYV 134


>Z83245-12|CAD54180.1|  449|Caenorhabditis elegans Hypothetical
           protein ZK131.11b protein.
          Length = 449

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
 Frame = +1

Query: 79  SRLRCSAPGEGRPRTFSPDSRS*SSVLRPTVSQQSANTLPALFLRWPLLNRTLSNLTLIN 258
           SRL+CS+P      T +  +    S L  T S    +TL ++  R   L  +  NL+ I+
Sbjct: 45  SRLKCSSPELHHLSTVAATASERGSQLTATSSTLGPSTLLSVDKRHSRLGESSPNLSRIH 104

Query: 259 EDELTDSNIRLYLKTKQKKSFL--IQFCKTV 345
               T  ++ L  K  Q   F    ++C+ V
Sbjct: 105 HTH-TQLSLGLPNKMNQTNDFFSSTEYCQYV 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,388,186
Number of Sequences: 27780
Number of extensions: 293744
Number of successful extensions: 711
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)