Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0843
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-3|AAK95874.1| 734|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z11505-2|CAA77585.1| 418|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81046-5|CAB02823.1| 225|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z66495-11|CAK12849.1| 502|Caenorhabditis elegans Hypothetical p... 29 4.7
Z66495-2|CAA91267.2| 502|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z66495-1|CAA91268.2| 502|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z80214-5|CAJ76929.1| 916|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z80214-4|CAB02263.1| 982|Caenorhabditis elegans Hypothetical pr... 28 8.2
U80842-11|AAB37941.2| 231|Caenorhabditis elegans Hypothetical p... 28 8.2
>U10402-3|AAK95874.1| 734|Caenorhabditis elegans Hypothetical
protein C34E10.5 protein.
Length = 734
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/79 (31%), Positives = 40/79 (50%)
Frame = +2
Query: 263 WTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNLARI 442
W S +V K+SP+I+ DS E++L +ELSY LG+ + I + S A I
Sbjct: 119 WESYVVGKISPWIDCDSSDPAFASLSEEHLLKELSYICYLGLQTMAIELTRISSPRTAAI 178
Query: 443 LQTYYETSHHPSLIWACVP 499
L+ + T + +W +P
Sbjct: 179 LKKWIWTRNSRFTVWVQLP 197
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +1
Query: 568 WYWWSKFHERLDWDKRV--GVVLELSADLPSQ----EVVKRWLGEPVKAIIVPTSIFHNN 729
W W+ F + V V L +S++LP + ++V RW EP+ A ++ + +F +
Sbjct: 217 WTIWADFRKNCGNFSGVYFQVALTISSELPDELTELKLVDRWKAEPLAAFVIESGLFISG 276
Query: 730 KKG 738
+ G
Sbjct: 277 RNG 279
>Z11505-2|CAA77585.1| 418|Caenorhabditis elegans Hypothetical
protein F59B2.3 protein.
Length = 418
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +2
Query: 422 SNNLARILQTYYETSHHPSLIWACVPML--CVEHIENALKMMKKRKLGMSPGTGGPNSMS 595
S N I++ Y ++ + +++ P L E IE + +G S GP M+
Sbjct: 176 SPNPVEIIEHVYGSTENIAIV-TMAPELEGAQEAIEYFVSTGTTVSVGHSSAKLGPGEMA 234
Query: 596 ALIGINVLVLFWSCLQIFHHR 658
L G ++ ++ +Q +HHR
Sbjct: 235 VLSGAKMITHLFNAMQSYHHR 255
>Z81046-5|CAB02823.1| 225|Caenorhabditis elegans Hypothetical
protein C37E2.2a protein.
Length = 225
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = +2
Query: 125 MSHRSTSMQLFIYSFAHYSPTFS*AIHKCR*KWWFYAVRYGSITQDWTSRIV 280
+ ++S +Q I F H++ F + C W YA+ + DW ++++
Sbjct: 59 LGYKSEKLQK-ISDFMHFTSIFPVGMITCGLFWGLYAINPALVMPDWIAKLI 109
>Z66495-11|CAK12849.1| 502|Caenorhabditis elegans Hypothetical
protein C36A4.3 protein.
Length = 502
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +3
Query: 60 KKMAQQEISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNAGKNGGFT 233
K M +QE+ + A +T T CSY P + + + A +NGG T
Sbjct: 294 KPMTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEEIMEAKENGGLT 351
>Z66495-2|CAA91267.2| 502|Caenorhabditis elegans Hypothetical
protein C36A4.2 protein.
Length = 502
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +3
Query: 60 KKMAQQEISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNAGKNGGFT 233
K M +QE+ + A +T T CSY P + + + A +NGG T
Sbjct: 294 KPMTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEEIMEAKENGGLT 351
>Z66495-1|CAA91268.2| 502|Caenorhabditis elegans Hypothetical
protein C36A4.1 protein.
Length = 502
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +3
Query: 60 KKMAQQEISCGYEYIITADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNAGKNGGFT 233
K M +QE+ + A +T T CSY P + + + A +NGG T
Sbjct: 294 KPMTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEEIMEAKENGGLT 351
>Z80214-5|CAJ76929.1| 916|Caenorhabditis elegans Hypothetical
protein C27D8.3b protein.
Length = 916
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 416 RESNNLARILQTYYETSHHPSLI 484
R +NNL + Q ++++ HHPSLI
Sbjct: 844 RPNNNLNQQQQHHHQSHHHPSLI 866
>Z80214-4|CAB02263.1| 982|Caenorhabditis elegans Hypothetical
protein C27D8.3a protein.
Length = 982
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 416 RESNNLARILQTYYETSHHPSLI 484
R +NNL + Q ++++ HHPSLI
Sbjct: 910 RPNNNLNQQQQHHHQSHHHPSLI 932
>U80842-11|AAB37941.2| 231|Caenorhabditis elegans Hypothetical
protein ZC239.4 protein.
Length = 231
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 227 FYAVRYGSITQDWTSRIVAKLSPYINVDSPSATVRQRHEDY 349
F+ G I +W++RI+ K+ P N +P+ + + +Y
Sbjct: 170 FHIYFKGCICLEWSARIIPKVKPRCNTKAPTFEGQMKRLNY 210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,473,240
Number of Sequences: 27780
Number of extensions: 410658
Number of successful extensions: 1198
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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