Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0842
(779 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 40 0.002
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 37 0.019
Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 31 0.70
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 31 0.70
Z68342-2|CAA92772.2| 424|Caenorhabditis elegans Hypothetical pr... 30 1.6
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 30 2.1
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 30 2.1
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 30 2.1
U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical p... 29 2.8
U80438-6|AAB37637.2| 663|Caenorhabditis elegans Hypothetical pr... 29 2.8
U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z46242-9|CAA86334.2| 491|Caenorhabditis elegans Hypothetical pr... 29 3.7
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 29 3.7
Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 28 6.5
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 28 6.5
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 28 6.5
AF038621-2|AAK71385.1| 329|Caenorhabditis elegans Hypothetical ... 28 6.5
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 28 6.5
Z75710-5|CAB54207.1| 240|Caenorhabditis elegans Hypothetical pr... 28 8.6
U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical pr... 28 8.6
AC024804-6|AAF60746.1| 162|Caenorhabditis elegans Hypothetical ... 28 8.6
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 40.3 bits (90), Expect = 0.002
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Frame = +1
Query: 292 DKFKYQRYKEQR*Y*NK*RKQPFDRPRGISGNNKRLQKQRFYHIRSRKTGDGMEKQKRNS 471
++ + QR+K+Q K RK+ R I N+ +KQ R EK KR
Sbjct: 198 EELQQQRHKQQLEEYEK-RKEILRREEEIKQQNQEREKQINEDFEKRN----QEKLKREE 252
Query: 472 TVAERKTGTVEQVREEYDKIQHRIKENMKRPTPFERVKKMFSKNKNKHHESNTGTIE--K 645
+ ++ +Q+ ++++K R E ++R FE+ K+ + + H ES +E K
Sbjct: 253 EIKQQNQEREKQINDDFEK---RKLEKLQREKLFEKNKQAKLQREKAHQESERRKLEKLK 309
Query: 646 RNGNTRPN 669
R NT N
Sbjct: 310 RENNTPTN 317
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 36.7 bits (81), Expect = 0.019
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 424 RSRKTGDGMEKQKRNSTVAERKTGTVEQVREEY--DKIQHRIKENMKRPTPFERVKKMFS 597
R ++ D EK+K+ E + Q RE+ D + R E ++R FE+ K+
Sbjct: 233 REKQINDDFEKRKQEKLQREEEMKQQNQEREKLIADDFEKRKLEKLQREKLFEKNKQAKL 292
Query: 598 KNKNKHHESNTGTIE--KRNGNTRPN 669
+ + H ES +E KR NT N
Sbjct: 293 QREKAHQESERRKLEKLKRENNTPTN 318
>Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical
protein R06A4.2 protein.
Length = 837
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 385 NNKRLQKQRFYHIRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHRIKENMKRP 564
+N+RLQK + R G K+K T+ E TV + E +++Q+R+ +++
Sbjct: 112 SNRRLQKFSDFSARPVTCGSVSRKEKVPETIPETLEETVPETVPEPERLQNRMPLDVEIS 171
Query: 565 TPFER 579
FE+
Sbjct: 172 DSFEK 176
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical protein
C03D6.4 protein.
Length = 1390
Score = 31.5 bits (68), Expect = 0.70
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = +2
Query: 302 STKDIRSSGSIKTSKENSPLTGQEE--LAEIINDFKNNVFTIS--EVEKLVMEWKNRNET 469
++ I SSGS+ +K +PL +EE L + N+ +IS E+EK + + N+T
Sbjct: 941 ASSSIFSSGSLFGTKTQTPLVSKEESTLTTGVPSLINSSLSISPQEIEKASSKVETLNKT 1000
Query: 470 QQSLKEKQE 496
++ EK E
Sbjct: 1001 EEVKDEKSE 1009
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 31.5 bits (68), Expect = 0.70
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +2
Query: 203 HAATTRSVLVLTHGRIQTFNIETPTSDISQINLSTK-DIRSSGSIKTSKENSPLTGQEEL 379
+A +L + G+++ ET ++ S+ N K + + K + EN G E
Sbjct: 971 NAMVVEKILNMRMGKVEKKVPETEVAEGSEENGEEKSEEKVKKEPKENGENGESVGNGES 1030
Query: 380 AEIINDFKNNVFTISEVEKLVMEWKNRNETQQSLKEKQEQL 502
++ + + N EVE+ +++WK R+ K E L
Sbjct: 1031 SKSKTESETNEIEEEEVEQFLIKWKGRSYVHCEWKTAAELL 1071
>Z68342-2|CAA92772.2| 424|Caenorhabditis elegans Hypothetical
protein F38E11.3 protein.
Length = 424
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 457 QKRNSTVAERKTGTVEQVREE--YDKIQHRIKENMKRPTPFERVKKMF 594
Q+R E G +E++R+E ++++Q + + R PFE +KK+F
Sbjct: 171 QERFIASYEDFIGNLEKLRKEKTHERVQIGVAAHSARAVPFENIKKLF 218
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Frame = +2
Query: 212 TTRSVLVLTHGRIQTFNIETPTSDISQINLSTKDIRSSGSI-KTS----KENSPLTGQEE 376
TT + G I T T T+ + STK+I + +I +TS + ++P E
Sbjct: 690 TTAIFAEASTGIITTDEETTSTTSTTPEITSTKEIVTESAITQTSVSVVESSTPRQLPER 749
Query: 377 LAEIINDFKNNVFTISEVEKLVMEWKNRNETQQSLKE 487
I+N FK+N+ + E ++L+ E ++ + T E
Sbjct: 750 WKAIVNKFKHNLEVLKEKKRLLKEKESTSTTGSDSSE 786
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/83 (22%), Positives = 40/83 (48%)
Frame = +1
Query: 391 KRLQKQRFYHIRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHRIKENMKRPTP 570
KR +++ + + K E +K V E E+++E+YD++ ++K + +
Sbjct: 351 KRQLEEKISEVNNFKKELIEEFKKCKKGVEEEFEKKFEKIKEDYDELYEKLKRDQR---D 407
Query: 571 FERVKKMFSKNKNKHHESNTGTI 639
ER +K+ K + ++ T TI
Sbjct: 408 LERDQKILKKGTGERNKEFTETI 430
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/83 (22%), Positives = 40/83 (48%)
Frame = +1
Query: 391 KRLQKQRFYHIRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHRIKENMKRPTP 570
KR +++ + + K E +K V E E+++E+YD++ ++K + +
Sbjct: 351 KRQLEEKISEVNNFKKELIEEFKKCKKGVEEEFEKKFEKIKEDYDELYEKLKRDQR---D 407
Query: 571 FERVKKMFSKNKNKHHESNTGTI 639
ER +K+ K + ++ T TI
Sbjct: 408 LERDQKILKKGTGERNKEFTETI 430
>U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical
protein C32E8.11 protein.
Length = 1927
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 511 REEYDKIQHRIKENMKRPTPFERVKKMFSKNKNKHHESNTGTIEK 645
+E +D R+K N++ P E V K K H E + +EK
Sbjct: 1284 KENFDTWVARVKRNLEMPLSSESVSKKGHSRKRSHSERSLLDLEK 1328
>U80438-6|AAB37637.2| 663|Caenorhabditis elegans Hypothetical
protein T19B4.1 protein.
Length = 663
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 224 VLVLTHGRIQTFNIETPTSDISQINLSTKDIRSSGS--IKTSKENSPLTGQEELAEIIND 397
VL L RI+ F + P D Q NL + S + T +EN + +I +
Sbjct: 503 VLDLNGKRIRQFGL--PGEDAGQFNLPHDIVSDSAGRLLVTDRENGRVQHMTTQGHVIEE 560
Query: 398 FKNNVFT 418
FK+ +FT
Sbjct: 561 FKSTMFT 567
>U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical
protein M02D8.3 protein.
Length = 915
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/107 (20%), Positives = 49/107 (45%)
Frame = +1
Query: 337 NK*RKQPFDRPRGISGNNKRLQKQRFYHIRSRKTGDGMEKQKRNSTVAERKTGTVEQVRE 516
N RK+ + + + + KR ++ R +R KTG +EK+++ R+ ++ +R
Sbjct: 401 NNKRKEKKEAEKLLERSYKRAEQAR---VRYEKTGIRLEKRRQLEEKRRRRQEELDDIRR 457
Query: 517 EYDKIQHRIKENMKRPTPFERVKKMFSKNKNKHHESNTGTIEKRNGN 657
+ + + +I E K+ + +K F K+ + + +R N
Sbjct: 458 QGEYKRDQILERKKKLKEI-KDQKEFEKDHRNQSQKRLDILRERVEN 503
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical
protein F15D3.1a protein.
Length = 3674
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/89 (13%), Positives = 45/89 (50%)
Frame = +2
Query: 263 IETPTSDISQINLSTKDIRSSGSIKTSKENSPLTGQEELAEIINDFKNNVFTISEVEKLV 442
+++ +D+ Q+ S + + + + ++ G+E+ ++++ F ++ +S + +
Sbjct: 655 VKSGKADVKQVQESQNEQKEQPA-SSEGLSTDTEGEEQKNQLVDKFLLHISKLSHELEPL 713
Query: 443 MEWKNRNETQQSLKEKQEQLNKCGKNMIK 529
+W + E + + ++ +N C + +I+
Sbjct: 714 QDWSEKFEVSRKKDDIRKMMNTCQEKLIQ 742
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical
protein F15D3.1a protein.
Length = 3674
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/89 (13%), Positives = 45/89 (50%)
Frame = +2
Query: 263 IETPTSDISQINLSTKDIRSSGSIKTSKENSPLTGQEELAEIINDFKNNVFTISEVEKLV 442
+++ +D+ Q+ S + + + + ++ G+E+ ++++ F ++ +S + +
Sbjct: 655 VKSGKADVKQVQESQNEQKEQPA-SSEGLSTDTEGEEQKNQLVDKFLLHISKLSHELEPL 713
Query: 443 MEWKNRNETQQSLKEKQEQLNKCGKNMIK 529
+W + E + + ++ +N C + +I+
Sbjct: 714 QDWSEKFEVSRKKDDIRKMMNTCQEKLIQ 742
>Z46242-9|CAA86334.2| 491|Caenorhabditis elegans Hypothetical
protein F35G12.12 protein.
Length = 491
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 416 TISEVEKLVMEWKNRNETQQSLKEKQEQLNKCGKNMIK 529
++ E EKL+ EW+N ++S K+ E L K K I+
Sbjct: 3 SLEEHEKLIEEWRNDYIAERSSKKGWEILEKLAKMQIE 40
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/89 (13%), Positives = 45/89 (50%)
Frame = +2
Query: 263 IETPTSDISQINLSTKDIRSSGSIKTSKENSPLTGQEELAEIINDFKNNVFTISEVEKLV 442
+++ +D+ Q+ S + + + + ++ G+E+ ++++ F ++ +S + +
Sbjct: 655 VKSGKADVKQVQESQNEQKEQPA-SSEGLSTDTEGEEQKNQLVDKFLLHISKLSHELEPL 713
Query: 443 MEWKNRNETQQSLKEKQEQLNKCGKNMIK 529
+W + E + + ++ +N C + +I+
Sbjct: 714 QDWSEKFEVSRKKDDIRKMMNTCQEKLIQ 742
>Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical protein
H40L08.3 protein.
Length = 1026
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/69 (20%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 448 MEKQKRNSTVAERKTGTVEQVREEYDKIQHRIKENMKRPTPFERVKKMFSKNKNKHHE-S 624
++ ++ + + +R +I+H +EN ++ + +K++ K +NK +E +
Sbjct: 892 VQLNEQRDHIGDENAKVNSMLRIAKQQIEHTREENQRQEAEIQSLKELVQKLRNKENEIT 951
Query: 625 NTGTIEKRN 651
T T K+N
Sbjct: 952 RTYTKVKKN 960
>Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical protein
H40L08.3 protein.
Length = 1026
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/69 (20%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 448 MEKQKRNSTVAERKTGTVEQVREEYDKIQHRIKENMKRPTPFERVKKMFSKNKNKHHE-S 624
++ ++ + + +R +I+H +EN ++ + +K++ K +NK +E +
Sbjct: 892 VQLNEQRDHIGDENAKVNSMLRIAKQQIEHTREENQRQEAEIQSLKELVQKLRNKENEIT 951
Query: 625 NTGTIEKRN 651
T T K+N
Sbjct: 952 RTYTKVKKN 960
>Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical
protein C05C10.2b protein.
Length = 1553
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 439 GDGMEKQKRNSTVAERKTGTV-EQVREEYDKIQHRIKENMKRPTPFERVKKMFSKNKNKH 615
G + K +++ ER+TG + +R++ NM P++R+ K KN H
Sbjct: 58 GKPVAKISPTASIDERETGIIGSTLRQDSTDSDSTGSSNMN---PYDRLDKEVISKKNAH 114
Query: 616 HESNTGTIEKRNGNTR 663
S +++ G+ R
Sbjct: 115 TNSYRNDVDELEGSLR 130
>Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical
protein C05C10.2a protein.
Length = 1551
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 439 GDGMEKQKRNSTVAERKTGTV-EQVREEYDKIQHRIKENMKRPTPFERVKKMFSKNKNKH 615
G + K +++ ER+TG + +R++ NM P++R+ K KN H
Sbjct: 58 GKPVAKISPTASIDERETGIIGSTLRQDSTDSDSTGSSNMN---PYDRLDKEVISKKNAH 114
Query: 616 HESNTGTIEKRNGNTR 663
S +++ G+ R
Sbjct: 115 TNSYRNDVDELEGSLR 130
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 257 FNIETPTSDISQINLSTKDIRSSG----SIKTSKENSPLTGQEELAEIIND 397
+ +ETP SDISQ L I +SG +K E SP+ E+ +ND
Sbjct: 2029 YRLETPDSDISQRLLQW--IHNSGGKQAKVKMILEISPMLSTEKFEPFVND 2077
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 257 FNIETPTSDISQINLSTKDIRSSG----SIKTSKENSPLTGQEELAEIIND 397
+ +ETP SDISQ L I +SG +K E SP+ E+ +ND
Sbjct: 2067 YRLETPDSDISQRLLQW--IHNSGGKQAKVKMILEISPMLSTEKFEPFVND 2115
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 257 FNIETPTSDISQINLSTKDIRSSG----SIKTSKENSPLTGQEELAEIIND 397
+ +ETP SDISQ L I +SG +K E SP+ E+ +ND
Sbjct: 2029 YRLETPDSDISQRLLQW--IHNSGGKQAKVKMILEISPMLSTEKFEPFVND 2077
>AF038621-2|AAK71385.1| 329|Caenorhabditis elegans Hypothetical
protein M116.4 protein.
Length = 329
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 376 ISGNNKRLQKQRFYHIRSRKTGDGMEK 456
I G+N+RL+ RFYH R + D K
Sbjct: 239 IHGSNRRLEFSRFYHGRPHYSNDDCRK 265
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +1
Query: 385 NNKRLQKQRFYHIRSRKTGDG----MEKQKRNSTVAERKTGTVEQVREEYDKIQHRIKEN 552
N +R++K+R HI + + +EK+KR ++K +E+V +E + R ++
Sbjct: 301 NLERVEKERREHIERHRQAEARAKALEKEKRELEEKQKKE-NLERVEKERREHIERHRQA 359
Query: 553 MKRPTPFERVKKMFSKNKNKHH 618
R E+ K+ + + K +
Sbjct: 360 EARAKALEKEKRELEEKQKKEN 381
>Z75710-5|CAB54207.1| 240|Caenorhabditis elegans Hypothetical
protein D1081.9 protein.
Length = 240
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +1
Query: 406 QRFYHIRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHRIKENMKRPTPFERVK 585
+RF RS+ E +KR E ++ +EE +++ R+KE ++P+ V
Sbjct: 105 ERFAEARSKHVEKTQEIEKRKKAFLEDNV-KLKNAKEEKNQLMARLKELREQPSQNLSVN 163
Query: 586 KMFSKNKNK 612
K S + +
Sbjct: 164 KRRSNTRTE 172
>U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical
protein C28G1.4 protein.
Length = 1081
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +1
Query: 460 KRNSTVAER-KTGTVEQVREEYDKIQHRIKENMKRPTPF-ERV-KKMFSKNKNKHHES 624
+R+ T A+R T E+V EE + +K N+K P P ERV + K KNK + S
Sbjct: 55 ERSLTSAQRISTKVQEEVTEEVKPKRKYVKTNIKEPKPVPERVYVRGPYKKKNKPNSS 112
>AC024804-6|AAF60746.1| 162|Caenorhabditis elegans Hypothetical
protein Y51H7BR.3 protein.
Length = 162
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 615 MFVLVFGEHFLDSFKRRRSFHVFFNPVLNFIIF 517
+F L+F L KR FH++FN V+ I F
Sbjct: 94 IFALIF---VLQDLKRYLRFHIYFNSVITLIYF 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,483,338
Number of Sequences: 27780
Number of extensions: 339208
Number of successful extensions: 1521
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1517
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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