Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0840
         (745 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    25   0.84 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    24   1.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.9  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 17/71 (23%), Positives = 29/71 (40%)
 Frame = -2

Query: 408 WQPSFIGLVCPKSVRASCDTQSRTQVQKYGEYRSPPHGFEKEQVPSINTTDSRIKNRITF 229
           W  S + L+CP+S+      Q R    K  +Y                TT+ RI  +++ 
Sbjct: 14  WFLSKLFLLCPRSIDEKIKRQERHSFYKIYKYTYNIVAVSLTAYMVYITTNLRITQKLSI 73

Query: 228 LHTIFQGLFSA 196
           +  +   +FSA
Sbjct: 74  VTQLADLIFSA 84


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = -1

Query: 604 VWPLALISGCFLNNNQPMWEKKNPRVALWGSARSLNICGACDDHGPNPLRH 452
           V+P  +IS C+    + +W K    + +            CDDH   P RH
Sbjct: 216 VFPALIISACYAVIVRTIWSKSKLLIPVGHIP-----IRQCDDHRDRPPRH 261


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 582 EIKAKGHTVDVNDLRNDP 635
           E+K  GH + +N ++ DP
Sbjct: 500 EVKFLGHILTINGIKADP 517


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 700 HMYQHCGEKQFGTP 741
           H+  H GEK+F  P
Sbjct: 365 HLRTHTGEKRFACP 378


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,815
Number of Sequences: 336
Number of extensions: 5078
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)