Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0839
         (750 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0051 + 445035-445303,445380-445590,445737-445930,446151-44...    30   1.7  
03_01_0092 - 731069-731434,731569-733080                               29   3.0  
04_01_0034 - 401208-402923                                             29   3.9  
02_04_0532 + 23711530-23711755,23712984-23713093,23713204-237152...    29   3.9  
11_01_0340 + 2534998-2535660                                           29   5.2  
11_01_0044 + 340486-340854,341855-341911,343100-343974,344065-34...    29   5.2  
05_01_0266 - 2040555-2040722,2041248-2041349,2041461-2041958,204...    29   5.2  

>03_01_0051 +
           445035-445303,445380-445590,445737-445930,446151-446228,
           447049-447141,448495-448525,448729-449058
          Length = 401

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -3

Query: 253 STTSHMTHSRSYSYATSRGSHLPE*RGLLRLSYCRSRGRWSRTSWYIT 110
           S  +H+  S  Y Y   R  H     G   L +  SR R +R  W++T
Sbjct: 184 SKPAHILSSLCYPYVQLRQKHFAHQSGQALLRHVASRSRDTRFPWFVT 231


>03_01_0092 - 731069-731434,731569-733080
          Length = 625

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 278 PPPLNIPVEHYQPHDPQPILQLRHQPWQPSARIARAA 168
           PPP+ +   H  P  PQP LQ      + +  + RAA
Sbjct: 260 PPPIQVQPHHIMPMTPQPQLQPPQPQSKEANTVVRAA 296


>04_01_0034 - 401208-402923
          Length = 571

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2

Query: 275 PPLNIPVEHYQPHDPQPILQLRHQPWQPSARIARA 171
           PP+  P+   QPH P+  LQ R  P  P  +  RA
Sbjct: 283 PPMRAPLAEQQPHAPRLPLQPRPAPPPPPPQQQRA 317


>02_04_0532 +
           23711530-23711755,23712984-23713093,23713204-23715298,
           23716092-23716153,23716236-23716277,23716614-23716673,
           23716873-23717010,23717333-23717374,23717452-23717574
          Length = 965

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 370 WEIKQFLECAQQQHDLSLCDGFNEALRQ 453
           W +KQFL+C  Q+H  +L    + A+R+
Sbjct: 408 WILKQFLDCMYQKHPRALITDGDNAMRR 435


>11_01_0340 + 2534998-2535660
          Length = 220

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +1

Query: 67  KPSTSASKESCSPAK*C-TSSCGSIDPGY--DSSSTSAALAIRADGCHGW 207
           KP++S+S  S S       ++C   +PG    SSS+S     RAD C  W
Sbjct: 57  KPTSSSSSSSSSTGSASRAAACERKEPGSPASSSSSSGGKPGRADSCERW 106


>11_01_0044 +
           340486-340854,341855-341911,343100-343974,344065-344398,
           345553-345645,345913-346062
          Length = 625

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
 Frame = -2

Query: 284 LLPPPLNIPVE----HYQPHDPQPILQLRHQ 204
           LL  PL IP      H   HDP+P +QL H+
Sbjct: 284 LLALPLIIPASSSCSHVDTHDPEPTVQLNHE 314


>05_01_0266 -
           2040555-2040722,2041248-2041349,2041461-2041958,
           2042372-2042479,2042559-2042753
          Length = 356

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 281 AASQPSNSKQLLQLKPTINTRDSRLKDHAR 370
           AAS  S   Q L L   +N +DS LK+H R
Sbjct: 136 AASAKSAQSQCLSLLKELNEKDSSLKEHER 165


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,336,129
Number of Sequences: 37544
Number of extensions: 344280
Number of successful extensions: 888
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)