Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0839
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY128487-1|AAM75080.1| 170|Drosophila melanogaster RE73921p pro... 78 1e-14
AE014298-2527|AAF48701.1| 170|Drosophila melanogaster CG5010-PA... 78 1e-14
BT022350-1|AAY54766.1| 176|Drosophila melanogaster IP04476p pro... 52 1e-06
BT022266-1|AAY54682.1| 176|Drosophila melanogaster IP04776p pro... 52 1e-06
AE014297-4692|AAN14264.2| 176|Drosophila melanogaster CG31007-P... 52 1e-06
BT016161-1|AAV37046.1| 114|Drosophila melanogaster AT10055p pro... 51 1e-06
AE014297-4691|AAN14263.1| 114|Drosophila melanogaster CG31008-P... 50 3e-06
BT021370-1|AAX33518.1| 884|Drosophila melanogaster LP07893p pro... 31 1.7
AF132196-1|AAD34784.1| 1181|Drosophila melanogaster unknown prot... 31 1.7
AE014298-2950|ABC67193.1| 1456|Drosophila melanogaster CG32529-P... 31 1.7
AE014297-3830|AAF56487.1| 1181|Drosophila melanogaster CG4719-PA... 31 1.7
AF541948-1|AAN34650.1| 427|Drosophila melanogaster gag protein ... 29 6.8
BT003462-1|AAO39465.1| 1325|Drosophila melanogaster RH14840p pro... 29 8.9
AE014297-919|AAF54367.3| 1325|Drosophila melanogaster CG8874-PA,... 29 8.9
>AY128487-1|AAM75080.1| 170|Drosophila melanogaster RE73921p
protein.
Length = 170
Score = 77.8 bits (183), Expect = 1e-14
Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Frame = +1
Query: 256 TGMFSGGGSSEXXXXXXXXXXXXTYNQY---QGQP--AQGPCAWEIKQFLECAQQQHDLS 420
T +FSG G E Y Q QP QG CAWE+KQF++CAQ Q DL+
Sbjct: 92 TSLFSGSGDKEAAAPAPAAAAPAPQQPYYAQQQQPNEPQGACAWELKQFIQCAQGQADLT 151
Query: 421 LCDGFNEALRQCKVNNHI 474
LC+GFNEALRQCK ++H+
Sbjct: 152 LCEGFNEALRQCKQSHHL 169
>AE014298-2527|AAF48701.1| 170|Drosophila melanogaster CG5010-PA
protein.
Length = 170
Score = 77.8 bits (183), Expect = 1e-14
Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Frame = +1
Query: 256 TGMFSGGGSSEXXXXXXXXXXXXTYNQY---QGQP--AQGPCAWEIKQFLECAQQQHDLS 420
T +FSG G E Y Q QP QG CAWE+KQF++CAQ Q DL+
Sbjct: 92 TSLFSGSGDKEAAAPAPAAAAPAPQQPYYAQQQQPNEPQGACAWELKQFIQCAQGQADLT 151
Query: 421 LCDGFNEALRQCKVNNHI 474
LC+GFNEALRQCK ++H+
Sbjct: 152 LCEGFNEALRQCKQSHHL 169
>BT022350-1|AAY54766.1| 176|Drosophila melanogaster IP04476p
protein.
Length = 176
Score = 51.6 bits (118), Expect = 1e-06
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = +1
Query: 256 TGMFSGGGSSEXXXXXXXXXXXXTYNQYQGQPA-----QGPCAWEIKQFLECAQ-QQHDL 417
TGMF G G + + Q P GPCA+E++QFL+C + DL
Sbjct: 98 TGMFQGRGQAAPAKEQPQQEGSLAASASQSVPKPQLVEDGPCAFELRQFLKCTEDNSSDL 157
Query: 418 SLCDGFNEALRQCK 459
S+C FNEA++QC+
Sbjct: 158 SVCKEFNEAMQQCR 171
>BT022266-1|AAY54682.1| 176|Drosophila melanogaster IP04776p
protein.
Length = 176
Score = 51.6 bits (118), Expect = 1e-06
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = +1
Query: 256 TGMFSGGGSSEXXXXXXXXXXXXTYNQYQGQPA-----QGPCAWEIKQFLECAQ-QQHDL 417
TGMF G G + + Q P GPCA+E++QFL+C + DL
Sbjct: 98 TGMFQGRGQAAPAKEQPQQEGSLAASASQSVPKPQLVEDGPCAFELRQFLKCTEDNSSDL 157
Query: 418 SLCDGFNEALRQCK 459
S+C FNEA++QC+
Sbjct: 158 SVCKEFNEAMQQCR 171
>AE014297-4692|AAN14264.2| 176|Drosophila melanogaster CG31007-PA
protein.
Length = 176
Score = 51.6 bits (118), Expect = 1e-06
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = +1
Query: 256 TGMFSGGGSSEXXXXXXXXXXXXTYNQYQGQPA-----QGPCAWEIKQFLECAQ-QQHDL 417
TGMF G G + + Q P GPCA+E++QFL+C + DL
Sbjct: 98 TGMFQGRGQAAPAKEQPQQEGSLAASASQSVPKPQLVEDGPCAFELRQFLKCTEDNSSDL 157
Query: 418 SLCDGFNEALRQCK 459
S+C FNEA++QC+
Sbjct: 158 SVCKEFNEAMQQCR 171
>BT016161-1|AAV37046.1| 114|Drosophila melanogaster AT10055p
protein.
Length = 114
Score = 51.2 bits (117), Expect = 1e-06
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +1
Query: 355 QGPCAWEIKQFLECAQQQHDLSLCDGFNEALRQC 456
+GPCA E+KQFL+C + DLS+C FN+A+R+C
Sbjct: 75 EGPCAKEMKQFLKCTEDNDDLSVCKEFNDAVRRC 108
>AE014297-4691|AAN14263.1| 114|Drosophila melanogaster CG31008-PA
protein.
Length = 114
Score = 50.0 bits (114), Expect = 3e-06
Identities = 18/34 (52%), Positives = 27/34 (79%)
Frame = +1
Query: 355 QGPCAWEIKQFLECAQQQHDLSLCDGFNEALRQC 456
+GPCA E+K+FL+C + DLS+C FN+A+R+C
Sbjct: 75 EGPCAKEMKEFLKCTEDNDDLSVCKEFNDAVRRC 108
>BT021370-1|AAX33518.1| 884|Drosophila melanogaster LP07893p
protein.
Length = 884
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -2
Query: 272 PLNIPVEHYQPHDPQPILQLRHQPWQPSARIARAAEVELLS*PGSME 132
PL P+ H QPH Q +L L+HQ Q R + V S G+ E
Sbjct: 64 PLQHPLPH-QPHQLQHLLHLQHQQQQQQQHQQRCSSVGSTSSSGTCE 109
>AF132196-1|AAD34784.1| 1181|Drosophila melanogaster unknown
protein.
Length = 1181
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 28 KC*LNHASTRKISKPSTSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALA 180
KC L A +S+ + SAS +S + + + + PG SSS+SA L+
Sbjct: 785 KCLLQDAMATSLSQQALSASTQSLTSSSPAPDATAAAAPGTSSSSSSAILS 835
>AE014298-2950|ABC67193.1| 1456|Drosophila melanogaster CG32529-PD,
isoform D protein.
Length = 1456
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -2
Query: 272 PLNIPVEHYQPHDPQPILQLRHQPWQPSARIARAAEVELLS*PGSME 132
PL P+ H QPH Q +L L+HQ Q R + V S G+ E
Sbjct: 64 PLQHPLPH-QPHQLQHLLHLQHQQQQQQQHQQRCSSVGSTSSSGTCE 109
>AE014297-3830|AAF56487.1| 1181|Drosophila melanogaster CG4719-PA
protein.
Length = 1181
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 28 KC*LNHASTRKISKPSTSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALA 180
KC L A +S+ + SAS +S + + + + PG SSS+SA L+
Sbjct: 785 KCLLQDAMATSLSQQALSASTQSLTSSSPAPDATAAAAPGTSSSSSSAILS 835
>AF541948-1|AAN34650.1| 427|Drosophila melanogaster gag protein
protein.
Length = 427
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = -2
Query: 278 PPPLNIPVEHYQPHDP--------QPILQLRHQPWQPSARIARAAE 165
PPP NIP+ +Y P+DP Q + + R +P +P + A+
Sbjct: 368 PPPNNIPI-YYMPYDPPQQHPVGIQEMAEAREEPTEPPMELITEAQ 412
>BT003462-1|AAO39465.1| 1325|Drosophila melanogaster RH14840p
protein.
Length = 1325
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 40 NHASTRKISKPSTSASKESCSPAK*CTSS 126
NH TRK++K S +K S S + C SS
Sbjct: 660 NHIQTRKLAKDPDSQTKRSSSSSSECRSS 688
>AE014297-919|AAF54367.3| 1325|Drosophila melanogaster CG8874-PA,
isoform A protein.
Length = 1325
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 40 NHASTRKISKPSTSASKESCSPAK*CTSS 126
NH TRK++K S +K S S + C SS
Sbjct: 660 NHIQTRKLAKDPDSQTKRSSSSSSECRSS 688
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,249,601
Number of Sequences: 53049
Number of extensions: 599388
Number of successful extensions: 1887
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1873
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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