Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0836
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   3.4  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    22   4.5  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 382 ETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMS 498
           +TLG   N I EP+ +     T K ++  A AP   D++
Sbjct: 380 QTLGGSSNEIVEPVPQPVEEVTQKPSSTKAPAPPSRDLT 418


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 534 RLLYQLRESLLHRHVDKLWSFS 469
           R LY+L  +   RH  KLW+F+
Sbjct: 402 RTLYKLPPNYEIRHKFKLWNFN 423


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 529 KSSICSLLMPKEERLGCLAELVWAKLY*LWN*STMLP 639
           + S+ +LL    E + C++E VW+KL    N    LP
Sbjct: 97  QQSVTALLDTGSE-VSCISEEVWSKLIETGNKPPTLP 132


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 280 HPNVGLPQVEAGRSILHLKGI*NRRQVIFELHIY 179
           +P+V     E G  ++   G   R+  I +LHIY
Sbjct: 59  YPSVHYISRELGEDMVTTTGYKLRKGTILQLHIY 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,999
Number of Sequences: 336
Number of extensions: 4255
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)