Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0835
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.093
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.6  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   6.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 0.093
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -1

Query: 489 YIILFVNLFYMFAITWY*FQ*VCFGCNFRY*TF--IITVCDNFFQ*IFYVNFFGYYFCRT 316
           +I+  V+L  +  I ++ +  + F C F   T   +  +C  +F     +    YYFCR 
Sbjct: 245 FILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRA 304

Query: 315 YTKF 304
           +  F
Sbjct: 305 FIIF 308



 Score = 25.0 bits (52), Expect = 0.65
 Identities = 19/72 (26%), Positives = 28/72 (38%)
 Frame = -1

Query: 420 FGCNFRY*TFIITVCDNFFQ*IFYVNFFGYYFCRTYTKFLYTIPQFIKINFFGY*TFCSV 241
           F C F   T    +C  +F   F +    YYF   +  F   +   + I +F    F  +
Sbjct: 85  FYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLL 144

Query: 240 CIVSVSTFFCDF 205
           CI     F+C F
Sbjct: 145 CIY---YFYCAF 153


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/27 (22%), Positives = 14/27 (51%)
 Frame = -1

Query: 267 FGY*TFCSVCIVSVSTFFCDFNSWVFC 187
           F +  FC++C+  +++   +   W  C
Sbjct: 17  FRFGQFCAICVPKITSTNNEVPRWYIC 43


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 496 D*LHHPLCQFVLY 458
           D LHHP+ Q V+Y
Sbjct: 40  DKLHHPIHQTVIY 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,996
Number of Sequences: 336
Number of extensions: 2528
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)