Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0834
(660 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0911 + 28697654-28697698,28698170-28698278,28698352-286984... 60 1e-09
03_02_0933 - 12505196-12505286,12505759-12505814,12508780-125088... 54 1e-07
09_06_0067 - 20645012-20645095,20645365-20645466,20645583-206458... 38 0.007
04_04_0251 + 23930789-23930960,23931065-23931128,23931641-239317... 36 0.038
02_04_0215 - 20983210-20983293,20983440-20983512,20984072-209841... 36 0.038
03_02_0781 + 11141469-11141486,11141855-11141978,11142024-111423... 33 0.27
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 31 1.1
06_01_0400 + 2862684-2862872,2862956-2863170,2863298-2863448,286... 30 1.9
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991... 29 3.3
05_01_0163 - 1125364-1125422,1126062-1126205,1126640-1126756,112... 29 3.3
11_06_0562 + 25003246-25003746,25004975-25005214,25005576-250060... 29 4.3
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 29 4.3
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 29 4.3
01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044... 29 4.3
01_05_0660 - 24071523-24071780,24071873-24072127,24072209-240723... 29 4.3
01_05_0659 - 24061318-24061575,24061664-24061918,24062001-240621... 29 4.3
12_02_1269 + 27462644-27463612 28 5.7
12_02_1268 + 27458823-27460046 28 5.7
12_02_0277 + 16682836-16684368 28 5.7
12_02_0275 + 16662206-16663738 28 5.7
09_05_0014 - 20071514-20071690,20071779-20071894,20072177-200723... 28 5.7
02_04_0067 - 19425019-19425288,19425393-19425647,19425766-194259... 28 5.7
02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,606... 28 5.7
12_02_0122 + 13923510-13925081 28 7.6
05_07_0306 - 29108860-29109282,29109425-29110441 28 7.6
01_05_0631 + 23835120-23836109,23836204-23836674 28 7.6
>03_05_0911 +
28697654-28697698,28698170-28698278,28698352-28698433,
28698486-28698514,28699472-28699567,28699860-28699963,
28700071-28700201,28700276-28700369,28701666-28701721,
28702728-28702821
Length = 279
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +1
Query: 349 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE 507
Y QLV+GP G+GK+TYC + +T+GR + +VNLDPA + +Y DIRE
Sbjct: 3 YAQLVIGPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSYPVSTDIRE 55
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 15/66 (22%)
Frame = +3
Query: 507 VIVLEEVMEQIDLGPNGALLYCM-------------AYLESNL-DWLLNQLHGDNGTTFL 644
+I L++VME++ +GPNG L+YCM +LE NL DWL QL G +L
Sbjct: 56 LISLDDVMEELGMGPNGGLIYCMELLKLLTDPSENHRHLEDNLDDWLDEQLEGYLDDDYL 115
Query: 645 -FDLPG 659
FD PG
Sbjct: 116 VFDCPG 121
>03_02_0933 -
12505196-12505286,12505759-12505814,12508780-12508873,
12508949-12509079,12509187-12509290,12509585-12509680,
12510752-12510860,12511252-12511296
Length = 241
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = +1
Query: 349 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNY 483
Y QLV+GP G+GK+TYC + +T+GR + +VNLDPA + +Y
Sbjct: 3 YAQLVIGPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSY 47
>09_06_0067 -
20645012-20645095,20645365-20645466,20645583-20645828,
20646042-20646236,20646343-20646636,20646952-20647134,
20647534-20647593,20647796-20648002,20648081-20648282,
20648367-20648494,20648759-20648842,20648955-20649134,
20649281-20649372,20649620-20649789,20650226-20650337,
20650451-20650554,20651262-20651371
Length = 850
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 256 ESL*RYHFGLQKRRYRM-SAMTNKRFKPTQTFYGQLVLGPPGAGKTTYCIKMSDMLKTLG 432
ESL R H+GL K + R+ + ++ KP +GPPG GKT+ S + K L
Sbjct: 370 ESLDRDHYGLTKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLA---SSIAKALN 426
Query: 433 RQVIIVNLDPAND 471
R+ I ++L D
Sbjct: 427 RKFIRISLGGVKD 439
>04_04_0251 +
23930789-23930960,23931065-23931128,23931641-23931747,
23931832-23931899,23932068-23932097,23932357-23932460,
23932558-23932662,23932815-23932904,23932982-23933057,
23933292-23933361,23933799-23933869,23933945-23934035,
23934192-23934319,23934547-23934675,23934762-23934902
Length = 481
Score = 35.5 bits (78), Expect = 0.038
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +1
Query: 271 YHFGLQKR--RYRMSAM--TNKRFKPTQTFYGQLVL--GPPGAGKTTYCIKMSDML 420
Y GL++R RY SA+ T K P + ++VL GPPG GKT+ C ++ L
Sbjct: 185 YEVGLKQRLLRYAASALLFTEKGVDPCLVSWNRIVLLHGPPGTGKTSLCKALAQKL 240
>02_04_0215 -
20983210-20983293,20983440-20983512,20984072-20984159,
20984232-20984388,20984472-20984575,20985045-20985119,
20985144-20985213
Length = 216
Score = 35.5 bits (78), Expect = 0.038
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 561 LLYCMAYLESNLDWLLNQLHG-DNGTTFLFDLPG 659
L+YCM YLE N+DWL +L LFD PG
Sbjct: 25 LVYCMDYLEKNIDWLEEKLKPLIEDHYLLFDFPG 58
>03_02_0781 +
11141469-11141486,11141855-11141978,11142024-11142340,
11143219-11143509,11143751-11143956,11144048-11144327
Length = 411
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +1
Query: 376 GAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE*LFWKK 525
G GKTT+ ++ + + ++NLDPA T+ + +IDIR+ + +K+
Sbjct: 78 GTGKTTFMHRLVCHTQASNMRGYVLNLDPAVMTLPFGANIDIRDTVRYKE 127
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 519 EEVMEQIDLGPNGALLYCMAYLESNLDWLLN--QLHGDNGTTFLFDLPG 659
+EVM++ LGPNG +L + + D +++ + D L D PG
Sbjct: 126 KEVMKEYGLGPNGGILTSLNLFSTKFDEVISVIERRADQLDYVLVDTPG 174
>01_03_0179 +
13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCI----KMSDMLKTLGR 435
L+LGPPG+GKTT + K+ D LK G+
Sbjct: 233 LLLGPPGSGKTTLLLALAGKLEDNLKVSGK 262
>06_01_0400 +
2862684-2862872,2862956-2863170,2863298-2863448,
2863566-2863757,2864471-2864633,2864754-2864989,
2865446-2865622,2865707-2865826,2865939-2866241
Length = 581
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 471
L++GPPG GKTT +++ ML R+ +++ +D +N+
Sbjct: 121 LLIGPPGVGKTTVIREIARMLADDYRKRVMI-VDTSNE 157
>09_02_0499 -
9917891-9918148,9918240-9918494,9918769-9918940,
9919056-9919283,9919628-9919761,9919842-9919925,
9920007-9920297,9920569-9920901,9921029-9921171,
9921266-9921379,9921470-9921626,9921709-9921812,
9921914-9922074,9922158-9922474,9922574-9922855,
9923205-9923506,9923603-9923693,9923864-9923917,
9924052-9924128,9924213-9924372,9924473-9924557,
9924635-9924723,9925791-9925925
Length = 1341
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMS 411
L+LGPPGAGKTT + ++
Sbjct: 78 LLLGPPGAGKTTLLLALA 95
>05_01_0163 -
1125364-1125422,1126062-1126205,1126640-1126756,
1126835-1126926,1127942-1128022,1128323-1128378,
1128496-1128559,1128645-1128748,1129578-1129724,
1129876-1129989,1130070-1130153
Length = 353
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMSDMLKTL 429
V+GP G GKT +C+K++ +L TL
Sbjct: 105 VVGPSGIGKTQFCLKLA-LLATL 126
>11_06_0562 +
25003246-25003746,25004975-25005214,25005576-25006097,
25006184-25007248,25007350-25007656,25007761-25008001,
25008104-25008302,25008771-25008852,25008959-25009209,
25010061-25010219,25010220-25010603
Length = 1316
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 355 QLVLGPPGAGKTTYCIKMSDMLKTLGRQVII 447
+L+ GPPG+GKT I + +L + +V++
Sbjct: 467 ELIQGPPGSGKTEITIALLQVLHHMNLKVLL 497
>11_06_0143 +
20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVN 453
L+ GPPG GKTT +S M LG Q I VN
Sbjct: 454 LLSGPPGIGKTTTAKVVSQM---LGLQAIEVN 482
>08_02_0520 -
18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDML 420
L+LGPPG+GKTT + ++ L
Sbjct: 232 LLLGPPGSGKTTLLLALAGKL 252
>01_05_0662 -
24103475-24103735,24103831-24104085,24104280-24104451,
24104535-24104762,24104864-24104997,24105101-24105184,
24105273-24105563,24105660-24105992,24106081-24106334,
24106435-24106591,24106674-24106777,24106879-24107039,
24107216-24107529,24107614-24107895,24107991-24108292,
24108367-24108457,24108566-24108619,24108785-24108861,
24108963-24109207,24109322-24109410,24110811-24111254
Length = 1443
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDML 420
L+LGPPG+GKTT + ++ L
Sbjct: 181 LLLGPPGSGKTTLLLALAGKL 201
>01_05_0660 -
24071523-24071780,24071873-24072127,24072209-24072380,
24072458-24072685,24072785-24072918,24073005-24073088,
24073231-24073521,24073599-24073931,24074016-24074266,
24074354-24074620,24074707-24074867,24074978-24075294,
24075386-24075667,24075753-24076054,24076147-24076237,
24076326-24076379,24076497-24076573,24076700-24076859,
24077129-24077213,24077421-24077630,24077736-24078097
Length = 1457
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDML 420
L+LGPPG+GKTT + ++ L
Sbjct: 194 LLLGPPGSGKTTLLLALAGRL 214
>01_05_0659 -
24061318-24061575,24061664-24061918,24062001-24062172,
24062258-24062381,24062442-24062485,24063601-24063734,
24063822-24063905,24064100-24064390,24064713-24065045,
24065145-24065389,24065644-24065910,24065997-24066157,
24066253-24066569,24066665-24066946,24067024-24067325,
24067398-24067488,24067796-24067849,24067963-24068039,
24068159-24068318,24068653-24068737,24069029-24069238,
24069344-24069732
Length = 1444
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDML 420
L+LGPPG+GKTT + ++ L
Sbjct: 203 LLLGPPGSGKTTLLLALAGRL 223
>12_02_1269 + 27462644-27463612
Length = 322
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDML 420
G L+ GPPG GK+T M++ L
Sbjct: 221 GYLLFGPPGTGKSTMIAAMANFL 243
>12_02_1268 + 27458823-27460046
Length = 407
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDML 420
G L+ GPPG GK+T M++ L
Sbjct: 147 GYLLFGPPGTGKSTMIAAMANFL 169
>12_02_0277 + 16682836-16684368
Length = 510
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDML 420
G L+ GPPG GKTT M++ L
Sbjct: 245 GYLLYGPPGTGKTTMIGAMANFL 267
>12_02_0275 + 16662206-16663738
Length = 510
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDML 420
G L+ GPPG GKTT M++ L
Sbjct: 245 GYLLYGPPGTGKTTMIGAMANFL 267
>09_05_0014 -
20071514-20071690,20071779-20071894,20072177-20072315,
20072649-20072672,20072879-20072989,20073089-20073239,
20073357-20073478,20074287-20074556
Length = 369
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 367 GPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 471
G G GKTT +S +L + + V++++ DPA++
Sbjct: 31 GKGGVGKTTCSSILSILLASARQSVLVISTDPAHN 65
>02_04_0067 -
19425019-19425288,19425393-19425647,19425766-19425937,
19426069-19426302,19426523-19426656,19427663-19427746,
19428355-19428645,19428788-19429120,19429317-19429390,
19429464-19429644,19429993-19430096,19430232-19430392,
19430727-19431040,19431583-19431864,19432431-19432732,
19433176-19433266,19433368-19433421,19438917-19438993,
19439081-19439240,19439410-19439494,19439574-19440130
Length = 1404
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDML 420
L+LGPPG GKTT + ++ L
Sbjct: 189 LLLGPPGCGKTTLLLALAGKL 209
>02_02_0009 +
6068260-6068591,6068797-6068917,6069034-6069122,
6069207-6069291,6069421-6069580,6069667-6069743,
6069848-6069898,6069979-6070069,6070167-6070468,
6070549-6070830,6070911-6071388,6071457-6071560,
6071647-6071809,6071895-6072017,6072099-6072217,
6072304-6072636,6072713-6073003,6073088-6073171,
6073260-6073393,6073478-6073705,6073795-6073966,
6074062-6074316,6074408-6074668
Length = 1444
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCI----KMSDMLKTLGR 435
L+LGPPG+GKT+ + K+ LK GR
Sbjct: 184 LLLGPPGSGKTSLLLALAGKLDSTLKVSGR 213
>12_02_0122 + 13923510-13925081
Length = 523
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDML 420
G L+ GPPG GK+T M++ L
Sbjct: 247 GYLLYGPPGTGKSTMIAAMANFL 269
>05_07_0306 - 29108860-29109282,29109425-29110441
Length = 479
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDMLK 423
G L+ GPPG GK++ M++ LK
Sbjct: 252 GYLLYGPPGTGKSSLIAAMANYLK 275
>01_05_0631 + 23835120-23836109,23836204-23836674
Length = 486
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDMLK 423
G L+ GPPG GK++ M++ LK
Sbjct: 248 GYLLYGPPGTGKSSLIAAMANYLK 271
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,772,356
Number of Sequences: 37544
Number of extensions: 303698
Number of successful extensions: 777
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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