Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0834
(660 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1 fa... 77 6e-14
BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1 fa... 77 6e-14
AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein. 77 6e-14
AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein. 77 6e-14
AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens ... 77 6e-14
AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein pr... 76 1e-13
AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens ... 76 1e-13
AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein. 73 1e-12
BC031024-1|AAH31024.1| 284|Homo sapiens ATP binding domain 1 fa... 63 1e-09
BC008416-1|AAH08416.1| 284|Homo sapiens ATP binding domain 1 fa... 61 3e-09
AY359078-1|AAQ89437.1| 284|Homo sapiens PRYA1876 protein. 61 3e-09
AK223209-1|BAD96929.1| 284|Homo sapiens protein x 0004 variant ... 61 3e-09
AY364262-1|AAQ76821.1| 284|Homo sapiens protein x 0004 protein. 51 4e-06
AF117229-1|AAF17210.1| 284|Homo sapiens protein x 0004 protein. 51 4e-06
BX537973-1|CAD97937.1| 314|Homo sapiens hypothetical protein pr... 50 1e-05
BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1, ... 44 6e-04
AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protei... 44 6e-04
AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein. 44 6e-04
AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1 p... 44 6e-04
BC101181-1|AAI01182.1| 424|Homo sapiens MMAA protein protein. 34 0.52
BC101179-1|AAI01180.1| 418|Homo sapiens methylmalonic aciduria ... 34 0.52
BC101178-1|AAI01179.1| 418|Homo sapiens methylmalonic aciduria ... 34 0.52
AF524846-1|AAN77287.1| 418|Homo sapiens methylmalonic aciduria ... 34 0.52
Y15571-1|CAA75680.1| 350|Homo sapiens R51H2 protein. 32 2.1
U92074-1|AAB63358.1| 350|Homo sapiens RecA-like protein protein. 32 2.1
U84138-1|AAC39723.1| 350|Homo sapiens DNA repair protein RAD51B... 32 2.1
DQ160197-1|AAZ85144.1| 350|Homo sapiens RAD51-like 1 (S. cerevi... 32 2.1
CR536560-1|CAG38797.1| 350|Homo sapiens RAD51L1 protein. 32 2.1
BC030219-1|AAH30219.1| 384|Homo sapiens RAD51-like 1 (S. cerevi... 32 2.1
BC005102-1|AAH05102.1| 190|Homo sapiens chromosome 1 open readi... 31 3.6
AL122003-5|CAI22244.1| 190|Homo sapiens chromosome 1 open readi... 31 3.6
AL122003-4|CAI22243.1| 228|Homo sapiens chromosome 1 open readi... 31 3.6
AF416713-1|AAL16807.1| 190|Homo sapiens unknown protein. 31 3.6
BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C (a... 30 8.4
BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C (a... 30 8.4
AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C (a... 30 8.4
AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein. 30 8.4
>BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 77.0 bits (181), Expect = 6e-14
Identities = 33/58 (56%), Positives = 46/58 (79%)
Frame = +1
Query: 334 PTQTFYGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE 507
PT T +GQ V+GPPG+GKTTYC+ MS+ L+ LGR+V +VNLDPAN+ + Y+ +D+ E
Sbjct: 6 PT-TAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGE 62
Score = 64.5 bits (150), Expect = 3e-10
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +3
Query: 507 VIVLEEVMEQIDLGPNGALLYCMAYLESNLDWLLNQLHGDNGTTFLFDLPG 659
++ L +VM+ + LGPNG LLYCM YLE+NLDWL +L G FLFD PG
Sbjct: 63 LVGLGDVMDALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPG 113
>BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 77.0 bits (181), Expect = 6e-14
Identities = 33/58 (56%), Positives = 46/58 (79%)
Frame = +1
Query: 334 PTQTFYGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE 507
PT T +GQ V+GPPG+GKTTYC+ MS+ L+ LGR+V +VNLDPAN+ + Y+ +D+ E
Sbjct: 6 PT-TAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGE 62
Score = 64.5 bits (150), Expect = 3e-10
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +3
Query: 507 VIVLEEVMEQIDLGPNGALLYCMAYLESNLDWLLNQLHGDNGTTFLFDLPG 659
++ L +VM+ + LGPNG LLYCM YLE+NLDWL +L G FLFD PG
Sbjct: 63 LVGLGDVMDALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPG 113
>AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein.
Length = 310
Score = 77.0 bits (181), Expect = 6e-14
Identities = 33/58 (56%), Positives = 46/58 (79%)
Frame = +1
Query: 334 PTQTFYGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE 507
PT T +GQ V+GPPG+GKTTYC+ MS+ L+ LGR+V +VNLDPAN+ + Y+ +D+ E
Sbjct: 6 PT-TAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGE 62
Score = 64.5 bits (150), Expect = 3e-10
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +3
Query: 507 VIVLEEVMEQIDLGPNGALLYCMAYLESNLDWLLNQLHGDNGTTFLFDLPG 659
++ L +VM+ + LGPNG LLYCM YLE+NLDWL +L G FLFD PG
Sbjct: 63 LVGLGDVMDALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPG 113
>AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein.
Length = 310
Score = 77.0 bits (181), Expect = 6e-14
Identities = 33/58 (56%), Positives = 46/58 (79%)
Frame = +1
Query: 334 PTQTFYGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE 507
PT T +GQ V+GPPG+GKTTYC+ MS+ L+ LGR+V +VNLDPAN+ + Y+ +D+ E
Sbjct: 6 PT-TAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGE 62
Score = 64.5 bits (150), Expect = 3e-10
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +3
Query: 507 VIVLEEVMEQIDLGPNGALLYCMAYLESNLDWLLNQLHGDNGTTFLFDLPG 659
++ L +VM+ + LGPNG LLYCM YLE+NLDWL +L G FLFD PG
Sbjct: 63 LVGLGDVMDALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPG 113
>AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ12473 fis, clone NT2RM1000924, weakly similar to
HYPOTHETICAL 39.7 KD PROTEIN C34E10.2 IN CHROMOSOME III.
).
Length = 310
Score = 77.0 bits (181), Expect = 6e-14
Identities = 33/58 (56%), Positives = 46/58 (79%)
Frame = +1
Query: 334 PTQTFYGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE 507
PT T +GQ V+GPPG+GKTTYC+ MS+ L+ LGR+V +VNLDPAN+ + Y+ +D+ E
Sbjct: 6 PT-TAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGE 62
Score = 64.5 bits (150), Expect = 3e-10
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +3
Query: 507 VIVLEEVMEQIDLGPNGALLYCMAYLESNLDWLLNQLHGDNGTTFLFDLPG 659
++ L +VM+ + LGPNG LLYCM YLE+NLDWL +L G FLFD PG
Sbjct: 63 LVGLGDVMDALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPG 113
>AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein
protein.
Length = 310
Score = 75.8 bits (178), Expect = 1e-13
Identities = 33/58 (56%), Positives = 45/58 (77%)
Frame = +1
Query: 334 PTQTFYGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE 507
PT T +GQ V GPPG+GKTTYC+ MS+ L+ LGR+V +VNLDPAN+ + Y+ +D+ E
Sbjct: 6 PT-TAFGQAVTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGE 62
Score = 64.5 bits (150), Expect = 3e-10
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +3
Query: 507 VIVLEEVMEQIDLGPNGALLYCMAYLESNLDWLLNQLHGDNGTTFLFDLPG 659
++ L +VM+ + LGPNG LLYCM YLE+NLDWL +L G FLFD PG
Sbjct: 63 LVGLGDVMDALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPG 113
>AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ10349 fis, clone NT2RM2001100. ).
Length = 310
Score = 75.8 bits (178), Expect = 1e-13
Identities = 33/58 (56%), Positives = 45/58 (77%)
Frame = +1
Query: 334 PTQTFYGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE 507
PT T +GQ V GPPG+GKTTYC+ MS+ L+ LGR+V +VNLDPAN+ + Y+ +D+ E
Sbjct: 6 PT-TAFGQAVTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGE 62
Score = 64.5 bits (150), Expect = 3e-10
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +3
Query: 507 VIVLEEVMEQIDLGPNGALLYCMAYLESNLDWLLNQLHGDNGTTFLFDLPG 659
++ L +VM+ + LGPNG LLYCM YLE+NLDWL +L G FLFD PG
Sbjct: 63 LVGLGDVMDALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPG 113
>AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein.
Length = 172
Score = 72.5 bits (170), Expect = 1e-12
Identities = 31/50 (62%), Positives = 41/50 (82%)
Frame = +1
Query: 334 PTQTFYGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNY 483
PT T +GQ V+GPPG+GKTTYC+ MS+ L+ LGR+V +VNLDPAN+ + Y
Sbjct: 6 PT-TAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPY 54
>BC031024-1|AAH31024.1| 284|Homo sapiens ATP binding domain 1
family, member C protein.
Length = 284
Score = 62.9 bits (146), Expect = 1e-09
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +1
Query: 349 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE 507
Y QLV+GP G+GK+TYC M + L R V +VNLDPA + NY +DIRE
Sbjct: 4 YAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMVDIRE 56
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 507 VIVLEEVMEQIDL--GPNGALLYCMAYLESNLDWLLNQLHGDNGTTFLFDLPG 659
+I +++VME L GPNG L++CM Y +N DWL N L LFD PG
Sbjct: 57 LIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPG 109
>BC008416-1|AAH08416.1| 284|Homo sapiens ATP binding domain 1
family, member C protein.
Length = 284
Score = 61.3 bits (142), Expect = 3e-09
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = +1
Query: 349 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE 507
Y QLV+GP G+GK+TYC M + L R V +VNLDPA + NY DIRE
Sbjct: 4 YAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRE 56
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 507 VIVLEEVMEQIDL--GPNGALLYCMAYLESNLDWLLNQLHGDNGTTFLFDLPG 659
+I +++VME L GPNG L++CM Y +N DWL N L LFD PG
Sbjct: 57 LIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPG 109
>AY359078-1|AAQ89437.1| 284|Homo sapiens PRYA1876 protein.
Length = 284
Score = 61.3 bits (142), Expect = 3e-09
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = +1
Query: 349 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE 507
Y QLV+GP G+GK+TYC M + L R V +VNLDPA + NY DIRE
Sbjct: 4 YAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRE 56
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 507 VIVLEEVMEQIDL--GPNGALLYCMAYLESNLDWLLNQLHGDNGTTFLFDLPG 659
+I +++VME L GPNG L++CM Y +N DWL N L LFD PG
Sbjct: 57 LIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPG 109
>AK223209-1|BAD96929.1| 284|Homo sapiens protein x 0004 variant
protein.
Length = 284
Score = 61.3 bits (142), Expect = 3e-09
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = +1
Query: 349 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE 507
Y QLV+GP G+GK+TYC M + L R V +VNLDPA + NY DIRE
Sbjct: 4 YAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRE 56
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 507 VIVLEEVMEQIDL--GPNGALLYCMAYLESNLDWLLNQLHGDNGTTFLFDLPG 659
+I +++VME L GPNG L++CM Y +N DWL N L LFD PG
Sbjct: 57 LIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPG 109
>AY364262-1|AAQ76821.1| 284|Homo sapiens protein x 0004 protein.
Length = 284
Score = 50.8 bits (116), Expect = 4e-06
Identities = 24/53 (45%), Positives = 30/53 (56%)
Frame = +1
Query: 349 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE 507
Y V+GP A ++TYC M + L R V +VNLDPA + NY DIRE
Sbjct: 4 YAHCVMGPAHAKRSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRE 56
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 507 VIVLEEVMEQIDL--GPNGALLYCMAYLESNLDWLLNQLHGDNGTTFLFDLPG 659
+I +++VME L GPNG L++CM Y +N DWL N L LFD PG
Sbjct: 57 LIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPG 109
>AF117229-1|AAF17210.1| 284|Homo sapiens protein x 0004 protein.
Length = 284
Score = 50.8 bits (116), Expect = 4e-06
Identities = 24/53 (45%), Positives = 30/53 (56%)
Frame = +1
Query: 349 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE 507
Y V+GP A ++TYC M + L R V +VNLDPA + NY DIRE
Sbjct: 4 YAHCVMGPAHAKRSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRE 56
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 507 VIVLEEVMEQIDL--GPNGALLYCMAYLESNLDWLLNQLHGDNGTTFLFDLPG 659
+I +++VME L GPNG L++CM Y +N DWL N L LFD PG
Sbjct: 57 LIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPG 109
>BX537973-1|CAD97937.1| 314|Homo sapiens hypothetical protein
protein.
Length = 314
Score = 49.6 bits (113), Expect = 1e-05
Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Frame = +1
Query: 349 YGQLVLGPPGAGK----------TTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDID 498
Y QLV+GP G+GK +TYC M + L R V +VNLDPA + NY D
Sbjct: 24 YAQLVMGPAGSGKVRICGDKERKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMAD 83
Query: 499 IRE 507
IRE
Sbjct: 84 IRE 86
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 507 VIVLEEVMEQIDL--GPNGALLYCMAYLESNLDWLLNQLHGDNGTTFLFDLPG 659
+I +++VME L GPNG L++CM Y +N DWL N L LFD PG
Sbjct: 87 LIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPG 139
>BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1,
GTPase protein.
Length = 374
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/56 (37%), Positives = 35/56 (62%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE*LFWKK 525
LVLG G+GKTT+ +++ L G ++NLDPA + + +IDIR+ + +K+
Sbjct: 23 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKE 78
>AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 358
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/56 (37%), Positives = 35/56 (62%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE*LFWKK 525
LVLG G+GKTT+ +++ L G ++NLDPA + + +IDIR+ + +K+
Sbjct: 7 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKE 62
>AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein.
Length = 374
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/56 (37%), Positives = 35/56 (62%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE*LFWKK 525
LVLG G+GKTT+ +++ L G ++NLDPA + + +IDIR+ + +K+
Sbjct: 23 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKE 78
>AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1
protein.
Length = 374
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/56 (37%), Positives = 35/56 (62%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE*LFWKK 525
LVLG G+GKTT+ +++ L G ++NLDPA + + +IDIR+ + +K+
Sbjct: 23 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKE 78
>BC101181-1|AAI01182.1| 424|Homo sapiens MMAA protein protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.52
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 367 GPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDT 474
GPPGAGK+T+ ML G ++ ++ +DP++ T
Sbjct: 150 GPPGAGKSTFIEYFGKMLTERGHKLSVLAVDPSSCT 185
>BC101179-1|AAI01180.1| 418|Homo sapiens methylmalonic aciduria
(cobalamin deficiency) cblA type protein.
Length = 418
Score = 33.9 bits (74), Expect = 0.52
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 367 GPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDT 474
GPPGAGK+T+ ML G ++ ++ +DP++ T
Sbjct: 150 GPPGAGKSTFIEYFGKMLTERGHKLSVLAVDPSSCT 185
>BC101178-1|AAI01179.1| 418|Homo sapiens methylmalonic aciduria
(cobalamin deficiency) cblA type protein.
Length = 418
Score = 33.9 bits (74), Expect = 0.52
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 367 GPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDT 474
GPPGAGK+T+ ML G ++ ++ +DP++ T
Sbjct: 150 GPPGAGKSTFIEYFGKMLTERGHKLSVLAVDPSSCT 185
>AF524846-1|AAN77287.1| 418|Homo sapiens methylmalonic aciduria
type A protein.
Length = 418
Score = 33.9 bits (74), Expect = 0.52
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 367 GPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDT 474
GPPGAGK+T+ ML G ++ ++ +DP++ T
Sbjct: 150 GPPGAGKSTFIEYFGKMLTERGHKLSVLAVDPSSCT 185
>Y15571-1|CAA75680.1| 350|Homo sapiens R51H2 protein.
Length = 350
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMSDMLKTL 429
+ GPPG GKT +CI MS +L TL
Sbjct: 106 ITGPPGCGKTQFCIMMS-ILATL 127
>U92074-1|AAB63358.1| 350|Homo sapiens RecA-like protein protein.
Length = 350
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMSDMLKTL 429
+ GPPG GKT +CI MS +L TL
Sbjct: 106 ITGPPGCGKTQFCIMMS-ILATL 127
>U84138-1|AAC39723.1| 350|Homo sapiens DNA repair protein RAD51B
protein.
Length = 350
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMSDMLKTL 429
+ GPPG GKT +CI MS +L TL
Sbjct: 106 ITGPPGCGKTQFCIMMS-ILATL 127
>DQ160197-1|AAZ85144.1| 350|Homo sapiens RAD51-like 1 (S.
cerevisiae) protein.
Length = 350
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMSDMLKTL 429
+ GPPG GKT +CI MS +L TL
Sbjct: 106 ITGPPGCGKTQFCIMMS-ILATL 127
>CR536560-1|CAG38797.1| 350|Homo sapiens RAD51L1 protein.
Length = 350
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMSDMLKTL 429
+ GPPG GKT +CI MS +L TL
Sbjct: 106 ITGPPGCGKTQFCIMMS-ILATL 127
>BC030219-1|AAH30219.1| 384|Homo sapiens RAD51-like 1 (S.
cerevisiae) protein.
Length = 384
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMSDMLKTL 429
+ GPPG GKT +CI MS +L TL
Sbjct: 106 ITGPPGCGKTQFCIMMS-ILATL 127
>BC005102-1|AAH05102.1| 190|Homo sapiens chromosome 1 open reading
frame 57 protein.
Length = 190
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 367 GPPGAGKTTYCIKMSDMLKTLG 432
GPPG GKTT K S++LK+ G
Sbjct: 9 GPPGVGKTTLIHKASEVLKSSG 30
>AL122003-5|CAI22244.1| 190|Homo sapiens chromosome 1 open reading
frame 57 protein.
Length = 190
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 367 GPPGAGKTTYCIKMSDMLKTLG 432
GPPG GKTT K S++LK+ G
Sbjct: 9 GPPGVGKTTLIHKASEVLKSSG 30
>AL122003-4|CAI22243.1| 228|Homo sapiens chromosome 1 open reading
frame 57 protein.
Length = 228
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 367 GPPGAGKTTYCIKMSDMLKTLG 432
GPPG GKTT K S++LK+ G
Sbjct: 9 GPPGVGKTTLIHKASEVLKSSG 30
>AF416713-1|AAL16807.1| 190|Homo sapiens unknown protein.
Length = 190
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 367 GPPGAGKTTYCIKMSDMLKTLG 432
GPPG GKTT K S++LK+ G
Sbjct: 9 GPPGVGKTTLIHKASEVLKSSG 30
>BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 29.9 bits (64), Expect = 8.4
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTM 477
++ GPPG GKTT + ++ L + ++ L+ +ND+M
Sbjct: 73 IIAGPPGTGKTTSILCLARALLGPALKDAMLELNASNDSM 112
>BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 29.9 bits (64), Expect = 8.4
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTM 477
++ GPPG GKTT + ++ L + ++ L+ +ND+M
Sbjct: 73 IIAGPPGTGKTTSILCLARALLGPALKDAMLELNASNDSM 112
>AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C
(activator 1) 2 (40kD) protein.
Length = 320
Score = 29.9 bits (64), Expect = 8.4
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTM 477
++ GPPG GKTT + ++ L + ++ L+ +ND+M
Sbjct: 73 IIAGPPGTGKTTSILCLARALLGPALKDAMLELNASNDSM 112
>AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein.
Length = 320
Score = 29.9 bits (64), Expect = 8.4
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTM 477
++ GPPG GKTT + ++ L + ++ L+ +ND+M
Sbjct: 73 IIAGPPGTGKTTSILCLARALLGPALKDAMLELNASNDSM 112
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,916,988
Number of Sequences: 237096
Number of extensions: 1878606
Number of successful extensions: 3960
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 3815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3959
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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