Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0831
         (684 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1363|AAF52578.3|  346|Drosophila melanogaster CG33121-P...    33   0.36 
L77907-1|AAC37264.1| 1883|Drosophila melanogaster chromodomain-h...    32   0.64 
BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p pro...    32   0.64 
AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p pro...    32   0.64 
AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA ...    32   0.64 
BT023818-1|AAZ86739.1|  909|Drosophila melanogaster SD18573p pro...    31   1.1  
AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interact...    31   1.1  
AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA...    31   1.1  

>AE014134-1363|AAF52578.3|  346|Drosophila melanogaster CG33121-PA
           protein.
          Length = 346

 Score = 33.1 bits (72), Expect = 0.36
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +3

Query: 495 KVGIGILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSLKKQN 635
           ++GI ++   A G T  EL SVL   +D  E+  K+  I+ + +K N
Sbjct: 16  EIGISMILMGAKGTTAEELRSVLDLPVDVTEMAKKYERIMSNFQKHN 62


>L77907-1|AAC37264.1| 1883|Drosophila melanogaster
            chromodomain-helicase-DNA-bindingprotein protein.
          Length = 1883

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 13/51 (25%), Positives = 30/51 (58%)
 Frame = -2

Query: 248  LCSL*QMNIVEFEQQKM*CTL*KSSRLVTNGQEKPESKKNEAQGNFMIVVL 96
            LC + Q  I  +EQ K+  TL  + +++ N   KP++K+ + +  +++ ++
Sbjct: 1333 LCGIYQYGIGSWEQMKLDPTLKLTDKILLNDTRKPQAKQLQTRAEYLLKII 1383


>BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p protein.
          Length = 1645

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 13/51 (25%), Positives = 30/51 (58%)
 Frame = -2

Query: 248  LCSL*QMNIVEFEQQKM*CTL*KSSRLVTNGQEKPESKKNEAQGNFMIVVL 96
            LC + Q  I  +EQ K+  TL  + +++ N   KP++K+ + +  +++ ++
Sbjct: 1333 LCGIYQYGIGSWEQMKLDPTLKLTDKILLNDTRKPQAKQLQTRAEYLLKII 1383


>AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p
           protein.
          Length = 1101

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 13/51 (25%), Positives = 30/51 (58%)
 Frame = -2

Query: 248 LCSL*QMNIVEFEQQKM*CTL*KSSRLVTNGQEKPESKKNEAQGNFMIVVL 96
           LC + Q  I  +EQ K+  TL  + +++ N   KP++K+ + +  +++ ++
Sbjct: 801 LCGIYQYGIGSWEQMKLDPTLKLTDKILLNDTRKPQAKQLQTRAEYLLKII 851


>AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA
            protein.
          Length = 1883

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 13/51 (25%), Positives = 30/51 (58%)
 Frame = -2

Query: 248  LCSL*QMNIVEFEQQKM*CTL*KSSRLVTNGQEKPESKKNEAQGNFMIVVL 96
            LC + Q  I  +EQ K+  TL  + +++ N   KP++K+ + +  +++ ++
Sbjct: 1333 LCGIYQYGIGSWEQMKLDPTLKLTDKILLNDTRKPQAKQLQTRAEYLLKII 1383


>BT023818-1|AAZ86739.1|  909|Drosophila melanogaster SD18573p
           protein.
          Length = 909

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
 Frame = -3

Query: 556 DDSSNFVLPVAASVSIPMPTLDPG-GRSRSYHPRLQLH---A*SGSNRIYQNS-QQMDGI 392
           ++S    +P+  S +I   T++ G  RSR+  P  Q+    + S S R+ Q + QQ+   
Sbjct: 12  EESGPQAVPLNVSQAISTSTMEAGKSRSRNLLPMCQMPISISVSISERLQQQADQQLPSE 71

Query: 391 HLNPSNQDPQEFH 353
            + P++Q PQ+ H
Sbjct: 72  QITPTSQQPQQQH 84


>AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interacting
           16 protein.
          Length = 1518

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
 Frame = -3

Query: 556 DDSSNFVLPVAASVSIPMPTLDPG-GRSRSYHPRLQLH---A*SGSNRIYQNS-QQMDGI 392
           ++S    +P+  S +I   T++ G  RSR+  P  Q+    + S S R+ Q + QQ+   
Sbjct: 621 EESGPQAVPLNVSQAISTSTMEAGKSRSRNLLPMCQMPISISVSISERLQQQADQQLPSE 680

Query: 391 HLNPSNQDPQEFH 353
            + P++Q PQ+ H
Sbjct: 681 QITPTSQQPQQQH 693


>AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA
            protein.
          Length = 1744

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
 Frame = -3

Query: 556  DDSSNFVLPVAASVSIPMPTLDPG-GRSRSYHPRLQLH---A*SGSNRIYQNS-QQMDGI 392
            ++S    +P+  S +I   T++ G  RSR+  P  Q+    + S S R+ Q + QQ+   
Sbjct: 847  EESGPQAVPLNVSQAISTSTMEAGKSRSRNLLPMCQMPISISVSISERLQQQADQQLPSE 906

Query: 391  HLNPSNQDPQEFH 353
             + P++Q PQ+ H
Sbjct: 907  QITPTSQQPQQQH 919


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,933,828
Number of Sequences: 53049
Number of extensions: 630760
Number of successful extensions: 1764
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1763
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)