Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0828
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 69 2e-12
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 68 5e-12
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 64 6e-11
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 51 8e-07
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 49 3e-06
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 44 7e-05
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 44 9e-05
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 43 2e-04
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 43 2e-04
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 43 2e-04
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 40 0.002
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 40 0.002
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 39 0.003
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 39 0.004
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 38 0.005
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 38 0.005
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 38 0.005
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 38 0.006
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 38 0.006
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 38 0.008
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 38 0.008
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 37 0.011
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 37 0.011
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 37 0.011
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 36 0.025
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 36 0.025
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 36 0.033
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 36 0.033
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 34 0.10
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 34 0.10
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 34 0.10
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 32 0.41
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 30 1.6
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 30 1.6
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 30 1.6
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 30 1.6
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 1.6
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 29 2.9
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 29 2.9
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical pr... 28 5.0
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 28 5.0
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 28 5.0
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 28 6.6
AF025461-7|AAB70997.2| 330|Caenorhabditis elegans Seven tm rece... 28 6.6
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 28 6.6
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 27 8.7
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 27 8.7
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 27 8.7
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 27 8.7
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 69.3 bits (162), Expect = 2e-12
Identities = 28/47 (59%), Positives = 40/47 (85%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRE 648
++++G+A+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRE
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRE 388
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 436
V + F KNFY + + + EV+ YR + +TV G++ PI+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 437 GVKTMGYKEPTPIQAQGWPIAMSGR 511
+K Y +PT IQAQ P MSGR
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGR 342
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 68.1 bits (159), Expect = 5e-12
Identities = 26/47 (55%), Positives = 41/47 (87%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRE 648
++++G+A+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRE
Sbjct: 303 RDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRE 349
Score = 60.9 bits (141), Expect = 8e-10
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +2
Query: 260 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 439
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 440 VKTMGYKEPTPIQAQGWPIAMSGR 511
++ Y++PTPIQA P A+SGR
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGR 303
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 64.5 bits (150), Expect = 6e-11
Identities = 27/47 (57%), Positives = 38/47 (80%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRE 648
++++ +A+TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRE
Sbjct: 167 RDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRE 213
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/83 (36%), Positives = 50/83 (60%)
Frame = +2
Query: 263 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 442
+L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-L 144
Query: 443 KTMGYKEPTPIQAQGWPIAMSGR 511
+++PT IQ+ WPIAMSGR
Sbjct: 145 LYGKFQKPTVIQSISWPIAMSGR 167
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = +2
Query: 341 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 511
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + R
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNR 339
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/51 (47%), Positives = 38/51 (74%), Gaps = 4/51 (7%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRE 648
++++GVA+TGSGKT A++LP +V I + P + R + GP A+++APTRE
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRE 389
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 50.8 bits (116), Expect = 8e-07
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Frame = +1
Query: 442 KDNGLQRTDAHSSSRLADSYVWKNLVGVAQTGSGKTLAYILPAIVHINNQ-PPIRRGD-- 612
+ NG ++ S ++ +GV+QTGSGKTLA++LPA++HI+ Q + D
Sbjct: 100 RKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEE 159
Query: 613 ---GPIALVLAPTRE 648
P LVL+PTRE
Sbjct: 160 QKPSPFVLVLSPTRE 174
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Frame = +2
Query: 266 LQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEANFPD 424
++P ++ Y SP +++E Y N + V S V++ P+ FE+A +
Sbjct: 33 MKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAFGSN 92
Query: 425 YVQQG-VKTMGYKEPTPIQAQGWPIAMSGR 511
G ++ G+++P+PIQ+Q WP+ +SG+
Sbjct: 93 ASIMGEIRKNGFEKPSPIQSQMWPLLLSGQ 122
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRE 648
++++G+A TGSGKT+ ++LP ++ Q P R +GP L++ P+RE
Sbjct: 228 RDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRE 277
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 296 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 472
P + ++S + E R ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 473 IQAQGWPIAMSGR 511
IQ QG P+A+SGR
Sbjct: 216 IQIQGIPVALSGR 228
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 44.4 bits (100), Expect = 7e-05
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 359 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 511
V +G +V PI F + + +++++ +KT GY PTP+Q P GR
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGR 204
Score = 35.5 bits (78), Expect = 0.033
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 11/58 (18%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRE 648
++L+ AQTGSGKT A+++P + I P R+ P ALVL+PTRE
Sbjct: 204 RDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRE 261
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/48 (41%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRE 648
KN++G A+TGSGKT A+++P + + + G GP A+++APT+E
Sbjct: 127 KNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKE 174
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +2
Query: 350 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 511
N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 177
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 10/57 (17%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRE 648
++L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRE
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 233
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +2
Query: 350 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 511
N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 161
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 10/57 (17%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRE 648
++L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRE
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 217
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +2
Query: 350 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 511
N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 158
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 10/57 (17%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRE 648
++L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRE
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 214
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Frame = +1
Query: 511 NLVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRE 648
+++G A+T +GKT A+ LP I I + R+ DGP+AL+LAPTRE
Sbjct: 420 DVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRE 470
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 35/47 (74%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRE 648
K+++ A+TGSGKTLA++LPAI + ++ ++ +G ++++PTRE
Sbjct: 106 KDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRE 151
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/69 (34%), Positives = 37/69 (53%)
Frame = +1
Query: 442 KDNGLQRTDAHSSSRLADSYVWKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 621
KDN + +A S ++VG A+TGSGKTLA ++P ++ + G
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDYGLG 150
Query: 622 ALVLAPTRE 648
AL+++PTRE
Sbjct: 151 ALIISPTRE 159
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRE 648
++++G A+TGSGKTLA+ +P + + + + GP AL++APTRE
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRE 79
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRE 648
++++G A+TGSGKTLA+ +P + + + + GP AL++APTRE
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRE 246
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 419 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 511
P+ V + ++ MG+ EPT IQ+ P A+ R
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDR 193
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +1
Query: 439 CKDNGLQRTDAHSSSRLADSYVWKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 618
C+ G + + L + K+++G+A+TGSGKT A+ +P + + + P
Sbjct: 59 CQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP-----QAF 113
Query: 619 IALVLAPTRE 648
LVL PTRE
Sbjct: 114 FCLVLTPTRE 123
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Frame = +1
Query: 511 NLVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRE 648
+++ AQTGSGKT A++LP + + ++ + G+G P ++L PTRE
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRE 640
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 401 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 508
F EAN + +++ V GY + TPIQ P+ G
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG 589
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Frame = +1
Query: 511 NLVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRE 648
+++ AQTGSGKT A++LP + + ++ + G+G P ++L PTRE
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRE 640
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 401 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 508
F EAN + +++ V GY + TPIQ P+ G
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG 589
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Frame = +1
Query: 511 NLVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRE 648
+++ AQTGSGKT A++LP + + ++ + G+G P ++L PTRE
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRE 640
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 401 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 508
F EAN + +++ V GY + TPIQ P+ G
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG 589
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRE 648
K+++ AQTGSGKT A++LP + + + + G +G P ++L PTRE
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRE 386
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 389 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGRI*LA 523
P + F +++ P +++ V+ GY TPIQ P+ G+ LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRE 648
K+++ AQTGSGKT A++LP + + + + G +G P ++L PTRE
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRE 386
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 389 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGRI*LA 523
P + F +++ P +++ V+ GY TPIQ P+ G+ LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +1
Query: 511 NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRE 648
+++G A+TG+GKTLA+ +P + ++ P G AL+L PTRE
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRE 168
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +1
Query: 511 NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRE 648
+++G A+TG+GKTLA+ +P + ++ P G AL+L PTRE
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRE 168
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Frame = +1
Query: 511 NLVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRE 648
+++ AQTGSGKT A++LP + + + + G+G P ++L PTRE
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRE 429
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 389 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 508
P + F EAN + +Q+ V GY + TPIQ P+ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Frame = +1
Query: 511 NLVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRE 648
+++ AQTGSGKT A++LP + + + + G+G P ++L PTRE
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRE 429
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 389 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 508
P + F EAN + +Q+ V GY + TPIQ P+ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Frame = +1
Query: 511 NLVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRE 648
+++ AQTGSGKT A++LP + + + + G+G P ++L PTRE
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRE 429
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 389 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 508
P + F EAN + +Q+ V GY + TPIQ P+ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 35.9 bits (79), Expect = 0.025
Identities = 18/47 (38%), Positives = 31/47 (65%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRE 648
K++V +++TGSGKT A+++P + + R G AL+++PTRE
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRE 104
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +2
Query: 383 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 511
H +++ V + ++ G+ +PTPIQ + P M G+
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGK 62
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 35.9 bits (79), Expect = 0.025
Identities = 18/47 (38%), Positives = 31/47 (65%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRE 648
K++V +++TGSGKT A+++P + + R G AL+++PTRE
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRE 104
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +2
Query: 383 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 511
H +++ V + ++ G+ +PTPIQ + P M G+
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGK 62
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 35.5 bits (78), Expect = 0.033
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Frame = +1
Query: 511 NLVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRE 648
++V A TGSGKTLA+++P ++ + ++ P L++APTRE
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRE 825
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 35.5 bits (78), Expect = 0.033
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Frame = +1
Query: 511 NLVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRE 648
++V A TGSGKTLA+++P ++ + ++ P L++APTRE
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRE 825
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRE 648
+N++ A TGSGKTLA+ LP I+ + + + +A+VL PTRE
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRE 215
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 511 NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRE 648
++V + TGSGKTLA++LP + I N G AL+L+P+RE
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRE 91
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +1
Query: 451 GLQRTDAHSSSRLADSYVWKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 630
G ++ A + K+++ AQ+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 631 LAPTRE 648
+APTRE
Sbjct: 103 MAPTRE 108
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +1
Query: 451 GLQRTDAHSSSRLADSYVWKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 630
G ++ A + K+++ AQ+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 631 LAPTRE 648
+APTRE
Sbjct: 103 MAPTRE 108
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRE 648
K++ A TG+GKT A++LP + + +P + LVL PTRE
Sbjct: 186 KDICACAATGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRE 230
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 401 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGR 511
FE+ N + + GY +PTPIQ P+A++G+
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGK 186
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 31.9 bits (69), Expect = 0.41
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 526 AQTGSGKTLAYILPAIVHINNQP 594
A TGSGKT+ Y+LP + + ++P
Sbjct: 163 APTGSGKTICYVLPVLAAVGSKP 185
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -1
Query: 275 KVGAKQNPIWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 96
++G K ++ H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 95 IPVTRHDYFSDLVEDVYLNYGFFLTQ 18
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -1
Query: 275 KVGAKQNPIWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 96
++G K ++ H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 95 IPVTRHDYFSDLVEDVYLNYGFFLTQ 18
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -1
Query: 275 KVGAKQNPIWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 96
++G K ++ H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 95 IPVTRHDYFSDLVEDVYLNYGFFLTQ 18
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -1
Query: 275 KVGAKQNPIWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 96
++G K ++ H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 95 IPVTRHDYFSDLVEDVYLNYGFFLTQ 18
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 17 PASERIHSLNKHLQLNPKNNHVW 85
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHINNQ 591
KN V VA TGSGKT I A+ HI +
Sbjct: 386 KNCVIVAPTGSGKTEVAIYAALKHIEER 413
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 532 TGSGKTLAYILPAIVH 579
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRE 648
++++ AQ+G+GKT + + + ++ Q +R AL+L+PTRE
Sbjct: 64 RDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRE 105
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRE 648
++++ AQ+G+GKT + + + ++ Q +R AL+L+PTRE
Sbjct: 64 RDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRE 105
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 158 RRIIAEFVASSKFGTTVSTAIIPV 87
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 158 RRIIAEFVASSKFGTTVSTAIIPV 87
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 511 NLVGVAQTGSGKTLAYILPAIVHIN 585
NL+ AQ+G+GKT A++L + I+
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRID 274
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 511 NLVGVAQTGSGKTLAYILPAIVHIN 585
NL+ AQ+G+GKT A++L + I+
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRID 299
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 511 NLVGVAQTGSGKTLAYILPAIVHIN 585
NL+ AQ+G+GKT A++L + I+
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRID 683
>Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 312 RTVGCGS*KFLLKGWSETESNLGDACSDLQRILFSHQILQILQIYCHRCQ 163
RTV + L+ G+ E S+L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 312 RTVGCGS*KFLLKGWSETESNLGDACSDLQRILFSHQILQILQIYCHRCQ 163
RTV + L+ G+ E S+L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 312 RTVGCGS*KFLLKGWSETESNLGDACSDLQRILFSHQILQILQIYCHRCQ 163
RTV + L+ G+ E S+L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 312 RTVGCGS*KFLLKGWSETESNLGDACSDLQRILFSHQILQILQIYCHRCQ 163
RTV + L+ G+ E S+L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = -2
Query: 505 RHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFD 332
R +YR N + + + Y + +I + F + + ++NLN T +L I+++F+
Sbjct: 29 RKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = -2
Query: 505 RHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFD 332
R +YR N + + + Y + +I + F + + ++NLN T +L I+++F+
Sbjct: 29 RKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPT 642
+ L+ A TG GKT A+++PAI + + +P I P L+LA T
Sbjct: 130 RGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANT 178
>AF025461-7|AAB70997.2| 330|Caenorhabditis elegans Seven tm
receptor protein 148 protein.
Length = 330
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -2
Query: 595 AVGCLCAQWLARCRPT--FCRNPFALRQLNSSRHSYRPALSLNGRRFFVTHCLYTLLHII 422
+V C+C +A C T FC + ++S H R L LN R+ F+T T+L +
Sbjct: 200 SVECVCI--IAVCFSTILFCASNIYFTMKSASGHMSRKTLELN-RQLFITLTFQTILPFV 256
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/84 (23%), Positives = 35/84 (41%)
Frame = -2
Query: 532 FALRQLNSSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLV 353
F + R S+RP + R+ F+ L L+H+ I + +M +L
Sbjct: 215 FCFKVRRQFRKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLT 269
Query: 352 IISVLFDFIW*SFENCRMWIIKVF 281
IIS ++W + C + I +F
Sbjct: 270 IIS---QYLWQLAQGCPVIIYLIF 290
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 296 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 454
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 296 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 454
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAI 573
+ LV A TG GKT A+++PAI
Sbjct: 31 RGLVVEAPTGIGKTYAFLIPAI 52
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 508 KNLVGVAQTGSGKTLAYILPAI 573
+ LV A TG GKT A+++PAI
Sbjct: 131 RGLVVEAPTGIGKTYAFLIPAI 152
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 148 IILLDLATVAIDLEDLEDLVGKKNSLEVRTCVA 246
+I+ + ID++DL +V KN + + CVA
Sbjct: 236 LIIASTCWMIIDMDDLSTVVFHKNEITTKRCVA 268
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,392,698
Number of Sequences: 27780
Number of extensions: 302784
Number of successful extensions: 1122
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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