Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0826
         (738 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40413-2|AAK39174.1|  296|Caenorhabditis elegans Hypothetical pr...    89   2e-18
Z47808-4|CAA87772.1|  235|Caenorhabditis elegans Hypothetical pr...    83   3e-16
AF100305-5|AAN65285.1|  353|Caenorhabditis elegans Hypothetical ...    31   0.85 
AF100305-4|AAC68916.2|  426|Caenorhabditis elegans Hypothetical ...    31   0.85 
AF100305-3|AAL65795.1|  426|Caenorhabditis elegans Hypothetical ...    31   0.85 
U88183-3|AAB52656.2|  593|Caenorhabditis elegans Warthog (hedgeh...    30   1.5  
U42848-3|AAA83609.1|  693|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z68748-6|CAD27621.1|   88|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AF038605-2|AAB92020.1|  698|Caenorhabditis elegans Hypothetical ...    28   6.0  
AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical ...    28   6.0  
Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical p...    28   7.9  
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF098501-3|AAM69106.1|  275|Caenorhabditis elegans Hypothetical ...    28   7.9  
AF098501-2|AAM69105.1|  298|Caenorhabditis elegans Hypothetical ...    28   7.9  
AF098501-1|AAC67404.2|  548|Caenorhabditis elegans Hypothetical ...    28   7.9  
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    28   7.9  

>U40413-2|AAK39174.1|  296|Caenorhabditis elegans Hypothetical
           protein C18B2.4 protein.
          Length = 296

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 38/89 (42%), Positives = 63/89 (70%)
 Frame = +1

Query: 241 QGGTEYLTTHRMIYNSKKNTDAMRSFSFPFIALQDVTVEQPMFSANCIKGKVRAQPNGNF 420
           + G  YLT+HR+I+ ++   D  +SF+ PF +++DV +EQP+ + N +KG V+  P GNF
Sbjct: 45  KSGALYLTSHRIIFMNESKKDEFKSFAMPFNSVRDVKLEQPLLTPNYLKGWVQPMPGGNF 104

Query: 421 IGEVKFKLTFKSGGAIEYGQAMLKAAHLA 507
            G  +++L+F  GG IE+G+A+L+AA +A
Sbjct: 105 DGCPEWRLSFPKGGCIEFGEALLRAADMA 133



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
 Frame = +2

Query: 116 MSLNTAHAD--HGVLIHAGECIILFSDNVSVEFYGNDTPEFKGIKEG 250
           MSLNT+H     G+LI+ GE I+L++ NV ++F   + P FK  K G
Sbjct: 1   MSLNTSHTPDGQGILIYNGEMILLYTTNVKLKFEKYNVPAFKSTKSG 47



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +3

Query: 627 PYSAFPDQPPPNSVFVSNTPPPYPGVTGAS-YPTG 728
           P + FP++PP  +V+V + PPPYPG+   + YP G
Sbjct: 177 PTNVFPERPPAQNVYVYDMPPPYPGIGQTTPYPAG 211


>Z47808-4|CAA87772.1|  235|Caenorhabditis elegans Hypothetical
           protein D2013.6 protein.
          Length = 235

 Score = 82.6 bits (195), Expect = 3e-16
 Identities = 40/91 (43%), Positives = 58/91 (63%)
 Frame = +1

Query: 235 GDQGGTEYLTTHRMIYNSKKNTDAMRSFSFPFIALQDVTVEQPMFSANCIKGKVRAQPNG 414
           G + GT YLT+HR+I+      D ++SF  PF ++QDV + QP+F AN + G   A   G
Sbjct: 43  GRRTGTIYLTSHRIIFMPDPG-DWLKSFEIPFNSMQDVNLNQPIFGANYLCGIASAVQGG 101

Query: 415 NFIGEVKFKLTFKSGGAIEYGQAMLKAAHLA 507
              GEVK+++TF  GG IE+GQ++L+A   A
Sbjct: 102 QMRGEVKWRMTFNRGGCIEFGQSLLQAVERA 132



 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +3

Query: 624 PPYSAFPDQPPPNSVFVSNTPPPYPGV 704
           P   +FPDQP P+ VF+S+ PPPYPG+
Sbjct: 172 PTTDSFPDQPNPSRVFMSSAPPPYPGI 198


>AF100305-5|AAN65285.1|  353|Caenorhabditis elegans Hypothetical
           protein W04B5.3c protein.
          Length = 353

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 627 PYSAFPDQPPPNSVFVSNTPPPYPGVT-GASYP 722
           PY++ P   PP+SV +S TP P P V    +YP
Sbjct: 272 PYTSVPMPQPPSSVPLSYTPAPTPSVPYTVTYP 304


>AF100305-4|AAC68916.2|  426|Caenorhabditis elegans Hypothetical
           protein W04B5.3a protein.
          Length = 426

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 627 PYSAFPDQPPPNSVFVSNTPPPYPGVT-GASYP 722
           PY++ P   PP+SV +S TP P P V    +YP
Sbjct: 272 PYTSVPMPQPPSSVPLSYTPAPTPSVPYTVTYP 304


>AF100305-3|AAL65795.1|  426|Caenorhabditis elegans Hypothetical
           protein W04B5.3b protein.
          Length = 426

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 627 PYSAFPDQPPPNSVFVSNTPPPYPGVT-GASYP 722
           PY++ P   PP+SV +S TP P P V    +YP
Sbjct: 272 PYTSVPMPQPPSSVPLSYTPAPTPSVPYTVTYP 304


>U88183-3|AAB52656.2|  593|Caenorhabditis elegans Warthog
           (hedgehog-like family)protein 6 protein.
          Length = 593

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 642 PDQPPPNSVFVSNTPPPYPGVTGASYPTGP 731
           P  PPP+S ++ N  P  P V   +YP  P
Sbjct: 283 PLPPPPSSNYIDNVAPASPVVQSPAYPQTP 312


>U42848-3|AAA83609.1|  693|Caenorhabditis elegans Hypothetical
           protein C31H1.1 protein.
          Length = 693

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/46 (23%), Positives = 28/46 (60%)
 Frame = -1

Query: 528 HQLPYDESKMSSF*HGLSILNSTS*FEGKLEFDLTNKVAIRLGTNF 391
           H+LP+++++   F H +  +     ++GK +F+L  +  +R+ +N+
Sbjct: 379 HELPFNKNERLDFNHTIEKIVQNHNYDGKYKFELLTRHLMRVMSNW 424


>Z68748-6|CAD27621.1|   88|Caenorhabditis elegans Hypothetical
           protein F13H10.6 protein.
          Length = 88

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = +3

Query: 624 PPYSAFPDQPPPNSV-FVSNTPPPYP-GVTGASYPTGP 731
           PPY+  P  PPP S  +V      YP G  G  YP  P
Sbjct: 10  PPYTQQPGYPPPGSAGYVPQQGGYYPQGQQGPYYPQQP 47


>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
            T08G11.1b protein.
          Length = 3185

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +3

Query: 651  PPPNSVFVSNTPPPY 695
            PPP SV V NTP P+
Sbjct: 2680 PPPKSVIVDNTPKPF 2694


>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
            T08G11.1a protein.
          Length = 3212

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +3

Query: 651  PPPNSVFVSNTPPPY 695
            PPP SV V NTP P+
Sbjct: 2707 PPPKSVIVDNTPKPF 2721


>AF038605-2|AAB92020.1|  698|Caenorhabditis elegans Hypothetical
           protein C02B10.5 protein.
          Length = 698

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +3

Query: 627 PYSAFPDQPPPNSVFVSNTPPPYPGVTGASYP-TGPG 734
           P+SA    PP    F  N    +PG+T   YP + PG
Sbjct: 420 PFSAGASYPPMGGPFPPNPYGMHPGMTPGGYPMSAPG 456


>AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical
           protein F54A3.6 protein.
          Length = 470

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 642 PDQPPPNSVFVSNTPPPYPGVTGASYP 722
           P+ PPP++ +    PPP P  + ++ P
Sbjct: 322 PNPPPPSAGYFFQAPPPAPASSSSTVP 348


>Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical
           protein K08E7.5c protein.
          Length = 896

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 642 PDQPPPNSVFVSNTPPPYPGVTGASYPTGPGF 737
           P Q P  +   SN+PP Y  + G S P   G+
Sbjct: 288 PKQAPGTNPSTSNSPPGYSELIGPSGPESQGY 319


>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
           protein K08E7.5a protein.
          Length = 1221

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 642 PDQPPPNSVFVSNTPPPYPGVTGASYPTGPGF 737
           P Q P  +   SN+PP Y  + G S P   G+
Sbjct: 613 PKQAPGTNPSTSNSPPGYSELIGPSGPESQGY 644


>Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical
           protein C09G5.2 protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 110 CIMSLNTAHADHGVLIHAGE-CIILFSDNVSVEFYGNDTPEF 232
           C+  +  AHAD   L+H GE C    +D + V++     P F
Sbjct: 102 CVDEVAAAHADCTALVHFGEACHSAPTDKIDVKYVLGSMPIF 143


>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
           protein C01G8.9a protein.
          Length = 1724

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +3

Query: 624 PPYSAFPDQPPPNSVFVSNTPPPYPGVTGASYP 722
           PP    P Q PP        P PYPG  G   P
Sbjct: 707 PPQPQQPPQGPPGPPGPQQHPGPYPGYPGYGPP 739


>AF098501-3|AAM69106.1|  275|Caenorhabditis elegans Hypothetical
           protein H28G03.2c protein.
          Length = 275

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 624 PPYSAFPDQPPPNSVFVSNTPPPYPGVTGASYP 722
           PP+S  P  PPP S   +   PP P  + A  P
Sbjct: 130 PPFSVPPSVPPPTSSAAAPIVPPPPVQSTAQPP 162


>AF098501-2|AAM69105.1|  298|Caenorhabditis elegans Hypothetical
           protein H28G03.2b protein.
          Length = 298

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 624 PPYSAFPDQPPPNSVFVSNTPPPYPGVTGASYP 722
           PP+S  P  PPP S   +   PP P  + A  P
Sbjct: 153 PPFSVPPSVPPPTSSAAAPIVPPPPVQSTAQPP 185


>AF098501-1|AAC67404.2|  548|Caenorhabditis elegans Hypothetical
           protein H28G03.2a protein.
          Length = 548

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 624 PPYSAFPDQPPPNSVFVSNTPPPYPGVTGASYP 722
           PP+S  P  PPP S   +   PP P  + A  P
Sbjct: 403 PPFSVPPSVPPPTSSAAAPIVPPPPVQSTAQPP 435


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 642  PDQPPPNSVFVSNTPPPYPGVTGASYPTG 728
            P  PPP+       PPP P  T +  PTG
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPPPTMSKAPTG 1371


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,772,441
Number of Sequences: 27780
Number of extensions: 353821
Number of successful extensions: 1309
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)