Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0824
(583 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 125 2e-29
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 123 1e-28
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 120 1e-27
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 118 3e-27
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 116 1e-26
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 110 9e-25
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 93 1e-19
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 66 3e-11
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 32 0.29
08_02_0802 + 21386248-21387468 30 1.2
02_05_0469 + 29297209-29297527,29297847-29297961,29298060-292982... 29 2.0
07_03_1268 + 25328448-25328506,25328589-25328768,25328872-253289... 29 3.6
05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023 28 4.7
06_03_1104 + 27623632-27623795,27624052-27624175,27624316-276248... 28 6.2
03_01_0010 - 94931-96034,96117-96442,97154-97283 28 6.2
04_03_0238 - 13193508-13193946,13194010-13194062 27 8.2
04_01_0275 + 3648866-3649951 27 8.2
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 125 bits (302), Expect = 2e-29
Identities = 59/88 (67%), Positives = 72/88 (81%), Gaps = 2/88 (2%)
Frame = +2
Query: 254 LSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLL 427
LSVAYKNV+GARR+SWR+ISSIEQK E G+E + + KEYR K+E EL +IC +L LL
Sbjct: 270 LSVAYKNVIGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLL 329
Query: 428 DKHLIPKASNPESRVFYLKMKGDYYRYL 511
D HL+P ++ PES+VFYLKMKGDYYRYL
Sbjct: 330 DSHLVPSSTAPESKVFYLKMKGDYYRYL 357
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = +3
Query: 111 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLFQL 263
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNL +
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSV 272
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 123 bits (296), Expect = 1e-28
Identities = 57/88 (64%), Positives = 72/88 (81%), Gaps = 2/88 (2%)
Frame = +2
Query: 254 LSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLL 427
LSVAYKNV+GARR+SWR+ISSIEQK E G+E + + K+YR K+E EL +IC +L LL
Sbjct: 52 LSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLL 111
Query: 428 DKHLIPKASNPESRVFYLKMKGDYYRYL 511
+ HL+P ++ PES+VFYLKMKGDYYRYL
Sbjct: 112 ESHLVPSSTAPESKVFYLKMKGDYYRYL 139
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = +3
Query: 111 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLFQL 263
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNL +
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSV 54
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 120 bits (288), Expect = 1e-27
Identities = 56/88 (63%), Positives = 70/88 (79%), Gaps = 2/88 (2%)
Frame = +2
Query: 254 LSVAYKNVVGARRSSWRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLL 427
LSVAYKNV+GARR+SWR++SSIEQK EG +E + KEYR K+E EL +IC +L LL
Sbjct: 46 LSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLL 105
Query: 428 DKHLIPKASNPESRVFYLKMKGDYYRYL 511
D HL+P ++ ES+VFYLKMKGDY+RYL
Sbjct: 106 DSHLVPSSTAAESKVFYLKMKGDYHRYL 133
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Frame = +3
Query: 126 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLFQL 263
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNL +
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSV 48
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 118 bits (285), Expect = 3e-27
Identities = 57/88 (64%), Positives = 69/88 (78%), Gaps = 2/88 (2%)
Frame = +2
Query: 254 LSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLL 427
LSVAYKNV+GARR+SWR+ISSIEQK E G+E KEYR ++E EL +IC +L LL
Sbjct: 51 LSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLL 110
Query: 428 DKHLIPKASNPESRVFYLKMKGDYYRYL 511
D HL+P A+ ES+VFYLKMKGDY+RYL
Sbjct: 111 DSHLVPSATAAESKVFYLKMKGDYHRYL 138
Score = 44.0 bits (99), Expect = 9e-05
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +3
Query: 114 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLFQL 263
S +EE V AKLAEQAERY++M M++V +T EL+ EERNL +
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSV 53
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 116 bits (279), Expect = 1e-26
Identities = 56/88 (63%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
Frame = +2
Query: 254 LSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKELREICYDVLGLL 427
LSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+E EL IC +L LL
Sbjct: 29 LSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAELARICDGILALL 88
Query: 428 DKHLIPKASNPESRVFYLKMKGDYYRYL 511
D HL+P A ES+VFYLKMKGDY+RYL
Sbjct: 89 DSHLVPSAGAAESKVFYLKMKGDYHRYL 116
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 110 bits (264), Expect = 9e-25
Identities = 52/88 (59%), Positives = 67/88 (76%), Gaps = 2/88 (2%)
Frame = +2
Query: 254 LSVAYKNVVGARRSSWRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLL 427
LSVAYKNV+GARR+SWR++SSIEQK EG + A+ YR +VE EL IC +L LL
Sbjct: 56 LSVAYKNVIGARRASWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLL 115
Query: 428 DKHLIPKASNPESRVFYLKMKGDYYRYL 511
D+ L+P A+ +++VFYLKMKGDY+RYL
Sbjct: 116 DERLVPAAAAVDAKVFYLKMKGDYHRYL 143
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
Frame = +3
Query: 132 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLFQL 263
+EE+V AKLAEQAERY++M M++V G EL+ EERNL +
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSV 58
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +2
Query: 257 SVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKH 436
SV +K +GARR+SWR++ S+EQK ++ Y+ KVE ELR +C +VL ++ H
Sbjct: 46 SVGFKKTIGARRASWRILESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIH 105
Query: 437 LIPKASNPESRVFYLKMKGDYYRYL 511
+P A++ E+ VF+ KMKGDYYRYL
Sbjct: 106 CLPLANSGENVVFFYKMKGDYYRYL 130
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 129 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLFQL 263
++E++V+ AKLAEQAERYDDM MK + V++S EER LF +
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSV 47
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 65.7 bits (153), Expect = 3e-11
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Frame = +2
Query: 254 LSVAYKNVVGARRSSWRVISSIEQK--TEGSERKQQMAKEYRVKVEKELREICYDVLGLL 427
LSV YKN++GA+R++ R+I SIE K T+G E + EYR KVE E+ +IC DV+ ++
Sbjct: 23 LSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQTAEYRRKVEAEMDKICCDVINII 82
Query: 428 DKHLIPKASNPESRVFYLKMKGDYYRYL 511
DK KGDYYRYL
Sbjct: 83 DK------------------KGDYYRYL 92
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 32.3 bits (70), Expect = 0.29
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +2
Query: 293 SSWRVISSIEQKTEGSERKQQMAKEYRVKVE--KELREICYD-VLGLLDKHLIPKASNPE 463
+ WR+++ + + E YRV ++ K+ I Y +GL+ ++ P
Sbjct: 111 AKWRILNRLHDRNE--------TLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRRPR 162
Query: 464 SRVFYLKMKGDYYRYLHKWPQEKPDILL 547
F K KG+ ++ WP EK D+++
Sbjct: 163 GMYFSAKDKGEMMSMIYNWPAEKVDMIV 190
>08_02_0802 + 21386248-21387468
Length = 406
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 185 RHGGRDEGSDGNRRRT*QRGEEPLSVAY--KNVVGARRSSWRVISSIEQKTEGSERKQ 352
R GRD GS G+ R R + LSV+ + V+ RR W+ S G +R Q
Sbjct: 208 RGRGRDTGSSGSSSREKDRADVGLSVSIDGERVLHVRRLRWKFRGSERVDLGGGDRVQ 265
>02_05_0469 +
29297209-29297527,29297847-29297961,29298060-29298255,
29298427-29298540,29298695-29298868,29299326-29299520,
29299666-29299788,29299892-29300004,29300117-29300237,
29300363-29300623,29301712-29301921
Length = 646
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 428 DKHLIPKASNPESRVFYLKMK---GDYYRYLHKWPQEKPDILL*RI 556
D +L+P +PES YL+M+ G Y +W + P I+ RI
Sbjct: 275 DIYLLPPGEDPESCQSYLRMRNREGKYNLMFEEWVTDNPFIISPRI 320
>07_03_1268 +
25328448-25328506,25328589-25328768,25328872-25328974,
25329095-25329119,25329587-25329614,25330603-25330755,
25331339-25333421,25333666-25334983,25335256-25335339,
25335756-25335769
Length = 1348
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 49 CLHSKTAGFNKSGISELVLF 108
C + +AGFN +SELVLF
Sbjct: 154 CARASSAGFNPDSVSELVLF 173
>05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023
Length = 620
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 501 TGTCTSGHRRNQTFCCRGFTE 563
TG CT + N+T CC FT+
Sbjct: 29 TGECTRKKKENRTSCCGDFTD 49
>06_03_1104 +
27623632-27623795,27624052-27624175,27624316-27624832,
27624943-27625073,27625161-27625567,27625690-27625963,
27626195-27626814,27627424-27627859
Length = 890
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 492 EITTGTCTSGHRRNQTFC 545
+I TG CTS H+ NQ C
Sbjct: 378 KILTGGCTSSHKANQILC 395
>03_01_0010 - 94931-96034,96117-96442,97154-97283
Length = 519
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 81 FIETRCLGVQTLFLFYFKPST 19
F+ CL V TLF+F+F P T
Sbjct: 456 FLFAACLCVMTLFVFFFLPET 476
>04_03_0238 - 13193508-13193946,13194010-13194062
Length = 163
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = +2
Query: 185 RHGGRDEGSDGNRRRT*QRGEEPLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAK 364
RHGGR G NRRR+ + +V + V +RRS R EGS + + +
Sbjct: 37 RHGGRGVGFADNRRRSEALQTKEATVEF---VASRRSGQRAAPVGRGGYEGSAGRGRASG 93
Query: 365 EYRVKVEKELREICYDVLG 421
+ + C ++ G
Sbjct: 94 RGGAEASVSFAQPCSEIRG 112
>04_01_0275 + 3648866-3649951
Length = 361
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 290 RSSWRVISSIEQKTEGSERKQQMAKEYR--VKVEKELREICYDVL 418
R SW +ISS+ +K E + Y ++V ++R++ +D +
Sbjct: 19 RRSWMLISSLGKKLASEEEWMEYEYHYSRGIRVSPDIRKVLFDCI 63
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,516,540
Number of Sequences: 37544
Number of extensions: 304814
Number of successful extensions: 1022
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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