Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0824
(583 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 2e-30
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 3e-24
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 95 3e-20
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 88 4e-18
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 29 3.7
SB_33946| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 28 4.8
SB_41987| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_34988| Best HMM Match : zf-CCHC (HMM E-Value=3e-12) 27 8.5
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 128 bits (310), Expect = 2e-30
Identities = 61/85 (71%), Positives = 69/85 (81%)
Frame = +2
Query: 254 LSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK 433
LSVAYKNVVGA+RSSWRVISSIEQK EGSERK+Q + YR +E EL E+C VL LL+
Sbjct: 23 LSVAYKNVVGAKRSSWRVISSIEQKLEGSERKKQNTETYRQTIENELNEVCETVLKLLES 82
Query: 434 HLIPKASNPESRVFYLKMKGDYYRY 508
LIP A + ES+VFYLKMKGDYYRY
Sbjct: 83 KLIPNAQSTESKVFYLKMKGDYYRY 107
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +3
Query: 189 MAAAMKEVTETGVELSNEERNLFQL 263
MA AMKE TE L EERNL +
Sbjct: 1 MAKAMKEATEISETLEQEERNLLSV 25
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 108 bits (260), Expect = 3e-24
Identities = 51/86 (59%), Positives = 69/86 (80%)
Frame = +2
Query: 254 LSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK 433
LSV+YKN+VG RRSSWRVISSIE+KT S + K+Y+ +EKEL+++C +VLG+L++
Sbjct: 125 LSVSYKNIVGQRRSSWRVISSIEEKTAESS-SLAIVKKYKACIEKELKDLCKEVLGILER 183
Query: 434 HLIPKASNPESRVFYLKMKGDYYRYL 511
LIP A + E++VFY K+KGDYYRYL
Sbjct: 184 -LIPGAEDEENKVFYFKLKGDYYRYL 208
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +3
Query: 120 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLFQL 263
M V +E L+ AKL+EQ +RYD+MA MKEV+E +LS EERNL +
Sbjct: 80 MMVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYPKLSKEERNLLSV 127
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 95.5 bits (227), Expect = 3e-20
Identities = 49/89 (55%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Frame = +2
Query: 254 LSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK 433
LSVAYKNVVGARRSSWRVISS+EQK E + K+YR + EL C +VL +L+
Sbjct: 52 LSVAYKNVVGARRSSWRVISSMEQK--APEEMAALTKKYREDITNELNGKCAEVLDILEN 109
Query: 434 HLIPKAS---NPESRVFYLKMKGDYYRYL 511
+L+ N E++VFYLKM+GDY+RYL
Sbjct: 110 YLLKDGQDDINTEAKVFYLKMRGDYHRYL 138
Score = 58.0 bits (134), Expect = 5e-09
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +3
Query: 108 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLFQL 263
P+ +EEL+ AK+AEQAERYDDM AM VT+ G L++EERNL +
Sbjct: 3 PNFVSKCSREELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLNDEERNLLSV 54
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 88.2 bits (209), Expect = 4e-18
Identities = 44/81 (54%), Positives = 60/81 (74%), Gaps = 3/81 (3%)
Frame = +2
Query: 254 LSVAYKNVVGARRSSWRVISSIEQKTE--GSE-RKQQMAKEYRVKVEKELREICYDVLGL 424
LSVAYKNV+GARR+SWR+I+SIEQK E G + K +M + YR +E+EL+ IC ++L L
Sbjct: 45 LSVAYKNVIGARRASWRIITSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSL 104
Query: 425 LDKHLIPKASNPESRVFYLKM 487
LD LI + + ES+VFY K+
Sbjct: 105 LDDSLIKNSQSEESKVFYNKI 125
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = +3
Query: 129 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLFQL 263
DKEE V AKLAEQAERYDDM +MKEV + G ELS E+RNL +
Sbjct: 3 DKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGTELSTEDRNLLSV 47
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +3
Query: 120 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLFQL 263
M + ELVQ AKLAEQ ER++D+ MK+ E L+ E RNL +
Sbjct: 186 MQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNKEHRNLLSV 233
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +2
Query: 254 LSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAK--EYRVKVEKELREICYDVL 418
LSV YKNVVG++R +WR + ++ R Q+ +Y+ K+E EL+ +C ++L
Sbjct: 231 LSVGYKNVVGSKRFAWRHLHHDALQSGRYIRDSQLKGIIKYKEKIEMELKTLCREIL 287
>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 96 ISPLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEER 248
+SPLPS+ +E+V KLAE+ E ++++ T+ E + EE+
Sbjct: 643 VSPLPSTATEDQMQEVVDSNKLAEKKEVTEEVSPVKPLSTKESKENALEEK 693
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Frame = +2
Query: 251 PLSVAYKNVVGAR------RSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYD 412
PLS K VV + + W ++S E+ +ER++Q E +VK E++ R+ +
Sbjct: 319 PLSTPAKQVVKTKWDRIREKHQWNLLSEDEKNKIKAERRKQKRLELKVKREEKERKRLEE 378
Query: 413 VLGLLDKHLIPKASN 457
+ + HL K SN
Sbjct: 379 LKRVSFAHLGMKLSN 393
>SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 868
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/42 (26%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -1
Query: 574 LGMLSVNPLQQNVWFLLWPLVQVPVVI--SFHFEVKHSTFWI 455
L +LS +P++ W+L W + + ++ +FE+KH + +
Sbjct: 781 LKLLSEDPIEVQYWYLEWTICKTRNIMLRDLNFEIKHIDYML 822
>SB_33946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 407 YDVLGLLDKHLIPKASNPESRVFYLKMKGDYY 502
YD ++ HL+P A R++ +K+ DYY
Sbjct: 6 YDSNTVVSHHLLPSAQTRYIRIYPVKVNSDYY 37
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 302 RVISSIEQKTEGSERKQQMAKEYRVKVEKELREIC 406
R++ IE+K E E ++ AKE + + E+E + IC
Sbjct: 919 RIMKEIEEK-EKKEEAERKAKEEKEREERERKRIC 952
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 347 KQQMAKEYRVKVEKELREICYDVLGLLDKHLIPK 448
K++M ++Y K+EKE+ Y+++ L K ++ K
Sbjct: 292 KEEMKEKYDGKIEKEMSGAIYEIISRLMKAVVGK 325
>SB_41987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Frame = +2
Query: 326 KTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK--HLIPKASNPESRVFYLKMKGDY 499
KT+G + + ++ +++ KE R + + L LDK + + + P++ ++ L +Y
Sbjct: 18 KTKGKKALRSISDNETLELAKEFRALFQERLRGLDKKSYHTSEQNKPDTELYVLACFAEY 77
Query: 500 Y--RY-LHKWPQEKP 535
+ +Y + K QEKP
Sbjct: 78 FPSKYRVTKCSQEKP 92
>SB_34988| Best HMM Match : zf-CCHC (HMM E-Value=3e-12)
Length = 469
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/68 (23%), Positives = 28/68 (41%)
Frame = +2
Query: 188 HGGRDEGSDGNRRRT*QRGEEPLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 367
H +G R R + +P YK + +R+ ++ EG +K++ +
Sbjct: 269 HAHTPHSHEGKRGRKREHDRDP-DQNYKKSISSRKGRMQIQIQNSPLEEGQSKKRRKKNK 327
Query: 368 YRVKVEKE 391
RV EKE
Sbjct: 328 KRVSDEKE 335
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,038,328
Number of Sequences: 59808
Number of extensions: 345753
Number of successful extensions: 1085
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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