BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0824 (583 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 157 5e-39 Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 157 5e-39 Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 149 2e-36 U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 147 6e-36 Z83102-6|CAB05461.1| 417|Caenorhabditis elegans Hypothetical pr... 29 3.2 AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 28 4.2 Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical pr... 28 5.6 Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical pr... 27 7.4 Z50742-1|CAA90614.2| 605|Caenorhabditis elegans Hypothetical pr... 27 7.4 Z71186-1|CAA94913.1| 301|Caenorhabditis elegans Hypothetical pr... 27 9.7 Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical pr... 27 9.7 Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical pr... 27 9.7 U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical pr... 27 9.7 U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin iso... 27 9.7 AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin M... 27 9.7 >Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical protein F52D10.3b protein. Length = 198 Score = 157 bits (381), Expect = 5e-39 Identities = 76/86 (88%), Positives = 79/86 (91%) Frame = +2 Query: 254 LSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK 433 LSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQMAKEYR KVEKELR+IC DVL LLDK Sbjct: 46 LSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDK 105 Query: 434 HLIPKASNPESRVFYLKMKGDYYRYL 511 LIPKA ES+VFYLKMKGDYYRYL Sbjct: 106 FLIPKAGAAESKVFYLKMKGDYYRYL 131 Score = 77.4 bits (182), Expect = 7e-15 Identities = 38/48 (79%), Positives = 41/48 (85%) Frame = +3 Query: 120 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLFQL 263 MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNL + Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSV 48 Score = 37.5 bits (83), Expect = 0.007 Identities = 16/25 (64%), Positives = 23/25 (92%) Frame = +1 Query: 508 LAQVATGETRHSVVEDSQKAYQDAF 582 LA+VA+G+ R+SVVE SQ++YQ+AF Sbjct: 131 LAEVASGDDRNSVVEKSQQSYQEAF 155 >Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical protein F52D10.3a protein. Length = 248 Score = 157 bits (381), Expect = 5e-39 Identities = 76/86 (88%), Positives = 79/86 (91%) Frame = +2 Query: 254 LSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK 433 LSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQMAKEYR KVEKELR+IC DVL LLDK Sbjct: 46 LSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDK 105 Query: 434 HLIPKASNPESRVFYLKMKGDYYRYL 511 LIPKA ES+VFYLKMKGDYYRYL Sbjct: 106 FLIPKAGAAESKVFYLKMKGDYYRYL 131 Score = 77.4 bits (182), Expect = 7e-15 Identities = 38/48 (79%), Positives = 41/48 (85%) Frame = +3 Query: 120 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLFQL 263 MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNL + Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSV 48 Score = 37.5 bits (83), Expect = 0.007 Identities = 16/25 (64%), Positives = 23/25 (92%) Frame = +1 Query: 508 LAQVATGETRHSVVEDSQKAYQDAF 582 LA+VA+G+ R+SVVE SQ++YQ+AF Sbjct: 131 LAEVASGDDRNSVVEKSQQSYQEAF 155 >Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical protein M117.2 protein. Length = 248 Score = 149 bits (360), Expect = 2e-36 Identities = 72/86 (83%), Positives = 78/86 (90%) Frame = +2 Query: 254 LSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK 433 LSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQ+AKEYRVKVE+EL +IC DVL LLD+ Sbjct: 46 LSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDE 105 Query: 434 HLIPKASNPESRVFYLKMKGDYYRYL 511 LI KA ES+VFYLKMKGDYYRYL Sbjct: 106 FLIVKAGAAESKVFYLKMKGDYYRYL 131 Score = 77.0 bits (181), Expect = 9e-15 Identities = 39/48 (81%), Positives = 41/48 (85%) Frame = +3 Query: 120 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLFQL 263 MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNL + Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSV 48 Score = 29.9 bits (64), Expect = 1.4 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = +1 Query: 508 LAQVATGETRHSVVEDSQKAYQDA 579 LA+VA+ E R +VVE SQKAYQ+A Sbjct: 131 LAEVAS-EDRAAVVEKSQKAYQEA 153 >U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein protein. Length = 248 Score = 147 bits (356), Expect = 6e-36 Identities = 71/86 (82%), Positives = 77/86 (89%) Frame = +2 Query: 254 LSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK 433 LSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQ+AKEYRVKVE+EL +IC DVL LLD+ Sbjct: 46 LSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDE 105 Query: 434 HLIPKASNPESRVFYLKMKGDYYRYL 511 LI KA ES+ FYLKMKGDYYRYL Sbjct: 106 FLIVKAGAAESKAFYLKMKGDYYRYL 131 Score = 77.0 bits (181), Expect = 9e-15 Identities = 39/48 (81%), Positives = 41/48 (85%) Frame = +3 Query: 120 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLFQL 263 MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNL + Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSV 48 Score = 29.9 bits (64), Expect = 1.4 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = +1 Query: 508 LAQVATGETRHSVVEDSQKAYQDA 579 LA+VA+ E R +VVE SQKAYQ+A Sbjct: 131 LAEVAS-EDRAAVVEKSQKAYQEA 153 >Z83102-6|CAB05461.1| 417|Caenorhabditis elegans Hypothetical protein C54C8.7 protein. Length = 417 Score = 28.7 bits (61), Expect = 3.2 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -3 Query: 569 YAFCESSTTECLVSPVATCASTCSNLLS 486 Y + SS+ + + +TCA TC NL S Sbjct: 169 YCYTFSSSPQTFIGAQSTCAQTCGNLAS 196 >AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical protein Y111B2A.14 protein. Length = 1481 Score = 28.3 bits (60), Expect = 4.2 Identities = 15/47 (31%), Positives = 29/47 (61%) Frame = +2 Query: 263 AYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREI 403 A K+ + A++ R+ ++K E ERK++ +E + + E+E+REI Sbjct: 984 AEKDRIEAKKFEERMKKE-QEKQEEKERKEREKREEKERKEREIREI 1029 >Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical protein ZK1128.2b protein. Length = 464 Score = 27.9 bits (59), Expect = 5.6 Identities = 13/33 (39%), Positives = 22/33 (66%) Frame = +2 Query: 269 KNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 367 KNV+GAR+ +W+ I+ T+G E+ ++A E Sbjct: 100 KNVIGARQFNWKFIA-----TDGDEKSVRVAHE 127 >Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical protein C38D9.3 protein. Length = 1496 Score = 27.5 bits (58), Expect = 7.4 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +3 Query: 111 SSTMSVDKEELVQR--AKLAEQAERYDDMAAAMKEVTETGVELSNEERNLFQ 260 ++ + DK + V+R A+LA QAE+ A+K +T E ++LF+ Sbjct: 203 TANLENDKRDEVERLKAELARQAEKLMKAEQALKASEKTAAEKEQISKDLFE 254 >Z50742-1|CAA90614.2| 605|Caenorhabditis elegans Hypothetical protein K09A11.1 protein. Length = 605 Score = 27.5 bits (58), Expect = 7.4 Identities = 12/45 (26%), Positives = 25/45 (55%) Frame = -3 Query: 254 EVPLLVAKFDAGFRHFLHRGRHVVISLSLFGQFGTLHQFFLVDGH 120 E+P L +++ R L+ HVV+S+ ++ G++ + V G+ Sbjct: 145 ELPKLYQEYEDQLRMELNLAEHVVLSVDIWSDKGSIQEMIGVTGN 189 >Z71186-1|CAA94913.1| 301|Caenorhabditis elegans Hypothetical protein F23D12.1 protein. Length = 301 Score = 27.1 bits (57), Expect = 9.7 Identities = 9/41 (21%), Positives = 21/41 (51%) Frame = -1 Query: 580 KHLGMLSVNPLQQNVWFLLWPLVQVPVVISFHFEVKHSTFW 458 K++ +S N++ +W ++Q+ V+ + +K FW Sbjct: 86 KNVAYVSSFLCHNNIFCFIWAIIQILSVVDMFYGIKTIRFW 126 >Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical protein F59E10.2 protein. Length = 523 Score = 27.1 bits (57), Expect = 9.7 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +2 Query: 317 IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPES 466 ++ KT +K++ A + + + C VL LDK +PK S+ E+ Sbjct: 180 LDLKTSEEIKKEKDAMKDPKFYIRRMNNACKSVLDQLDKEYVPKKSSTET 229 >Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical protein F59E10.2 protein. Length = 523 Score = 27.1 bits (57), Expect = 9.7 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +2 Query: 317 IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPES 466 ++ KT +K++ A + + + C VL LDK +PK S+ E+ Sbjct: 180 LDLKTSEEIKKEKDAMKDPKFYIRRMNNACKSVLDQLDKEYVPKKSSTET 229 >U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical protein F20D12.2 protein. Length = 1116 Score = 27.1 bits (57), Expect = 9.7 Identities = 12/27 (44%), Positives = 20/27 (74%) Frame = +2 Query: 320 EQKTEGSERKQQMAKEYRVKVEKELRE 400 E+K + E+++ +AKE +KVEKE+ E Sbjct: 757 EKKLKRIEQEKNIAKELVLKVEKEISE 783 >U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin isoform 4 protein. Length = 523 Score = 27.1 bits (57), Expect = 9.7 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +2 Query: 317 IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPES 466 ++ KT +K++ A + + + C VL LDK +PK S+ E+ Sbjct: 180 LDLKTSEEIKKEKDAMKDPKFYIRRMNNACKSVLDQLDKEYVPKKSSTET 229 >AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin MOG-6 protein. Length = 523 Score = 27.1 bits (57), Expect = 9.7 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +2 Query: 317 IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPES 466 ++ KT +K++ A + + + C VL LDK +PK S+ E+ Sbjct: 180 LDLKTSEEIKKEKDAMKDPKFYIRRMNNACKSVLDQLDKEYVPKKSSTET 229 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,342,164 Number of Sequences: 27780 Number of extensions: 266722 Number of successful extensions: 865 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 836 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 864 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1215936170 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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