Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0823
         (702 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...   113   7e-27
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.0  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    24   4.0  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   9.3  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score =  113 bits (271), Expect = 7e-27
 Identities = 53/60 (88%), Positives = 56/60 (93%)
 Frame = +2

Query: 509 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVS 688
           YFNDSQRQATKDAG I+GLNV+RIINEPTAAA+AYGLDK   GERNVLIFDLGGGTFDVS
Sbjct: 9   YFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVS 68


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +3

Query: 66   NGKSTRSRNRSGYHVLLRWCLPAREGGDHR--QRPG 167
            +GK  RS +   +++LL    P REG  H+  Q PG
Sbjct: 1802 DGKYKRSYSYEPHNLLLSNLFPPREGFHHKAVQLPG 1837


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
 Frame = +2

Query: 89  ESIWVPRTLALVSSSTGRWRSSPT-TRATGPLRLMLRSQTPSVSSEMPPRTRWR*TQQHN 265
           E++W   + A   S T  W+      RAT  L L+   Q P +      +  W   Q+H+
Sbjct: 30  ENLWKFESTAAPESLTETWKEGDAKARATIAL-LVDDCQHPLIRDCKTAKGTWDALQKHH 88

Query: 266 IRCQTSHRT*VRRCYCASRHEALAFRGCHXWR 361
            +   S +  + +  C + ++       H +R
Sbjct: 89  QKTTMSTKVSLLKKLCKAEYDESGDMEAHLFR 120


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 442 FVSTMELTSSGKKVLSSPLYATLILGLPPSVTTSK 338
           F S +  T S     SS L +T+   LPP VTT++
Sbjct: 803 FASRLRATESTATESSSTL-STVTTTLPPVVTTAR 836


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,174
Number of Sequences: 2352
Number of extensions: 17648
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)