Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0819
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   1.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.4  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   5.8  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   5.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   7.7  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   7.7  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +3

Query: 234 LYAFGWRLDGLDSQMSPADGAVDGYLG-YLSIRQLNGWN 347
           ++AFGW   G  S     D   DG +G Y  I++L   N
Sbjct: 120 IFAFGWLKKGKLSSFESNDETKDGKVGLYERIQKLKKAN 158


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -2

Query: 460 VPLNTRWAVS-SSTHLSNNIYIAN*RTSYECIHKNS 356
           +P+N +  V  + T +  N+  A+ + +Y+C+ KNS
Sbjct: 551 LPINRKQKVFINGTLIIENVERASDQATYDCVAKNS 586


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 411 LLRWVDELTAHLVLSGTRAHRYPQR 485
           +L+WV ++   L ++ T+  R+P R
Sbjct: 1   MLKWVLKVGNVLAMTPTKEKRFPHR 25


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 411 LLRWVDELTAHLVLSGTRAHRYPQR 485
           +L+WV ++   L ++ T+  R+P R
Sbjct: 1   MLKWVLKVGNVLAMTPTKEKRFPHR 25


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 88  TKNVLSLYTIIIMGC*FVYLINLYIY 165
           T + L +   +I+G   +YL +LYI+
Sbjct: 27  TLSPLKVLQTVILGTTCIYLTSLYIW 52


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 88  TKNVLSLYTIIIMGC*FVYLINLYIY 165
           T + L +   +I+G   +YL +LYI+
Sbjct: 27  TLSPLKVLQTVILGTTCIYLTSLYIW 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,515
Number of Sequences: 336
Number of extensions: 4075
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)