Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0818
         (681 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IDG7 Cluster: Putative uncharacterized protein PF13_0...    36   1.2  
UniRef50_O96253 Cluster: Putative uncharacterized protein PFB080...    35   1.6  
UniRef50_Q4P5G4 Cluster: Putative uncharacterized protein; n=1; ...    35   2.1  
UniRef50_Q7R9U0 Cluster: CCAAT-box DNA binding protein subunit B...    34   3.7  
UniRef50_Q22VC9 Cluster: Putative uncharacterized protein; n=4; ...    33   4.9  
UniRef50_Q97FC3 Cluster: Predicted membrane protein; n=1; Clostr...    33   8.5  

>UniRef50_Q8IDG7 Cluster: Putative uncharacterized protein
           PF13_0277; n=4; Plasmodium|Rep: Putative uncharacterized
           protein PF13_0277 - Plasmodium falciparum (isolate 3D7)
          Length = 2068

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 20/42 (47%), Positives = 23/42 (54%)
 Frame = -1

Query: 444 KVNSNSSSVLNIYT*HNDLINIYVCNTYNFINYLHCTYYNKQ 319
           K N N    +NIY+  ND INIY  N  N  N +H   YNKQ
Sbjct: 611 KENKNKQDKMNIYSYINDHINIY-NNDNNDNNSIHNNLYNKQ 651


>UniRef50_O96253 Cluster: Putative uncharacterized protein PFB0800c;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFB0800c - Plasmodium falciparum
            (isolate 3D7)
          Length = 1817

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
 Frame = +3

Query: 294  ILNNVDIITVYY-NMYNVNSL*NYMYYTHIY*LNRYVKCK--Y*EPKSYYY*LLLVILAF 464
            I +N+D I +   N++   +  + +Y+T+IY LN++  C   Y   K +YY + +  + F
Sbjct: 1432 IYDNIDYIFIKKKNLFCYTNHLSLLYFTYIYSLNKFYYCTLYYNISKCFYYKINIENIHF 1491

Query: 465  INRLVPVYAIKPFCLYL-LFFFNCEISS 545
             N+++ ++ I   C Y+ + FF   + S
Sbjct: 1492 KNKII-LFFIFTQCKYIYIKFFRLLVQS 1518


>UniRef50_Q4P5G4 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 773

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = +3

Query: 441 LLLVILAFINRLVPVYAIKPFCLYLLFFFNCEISSKQK*TLFHSA 575
           L LV+LAF   L+P+ A+   C+Y+  + +C  SS  K  L  SA
Sbjct: 3   LWLVLLAFCAGLMPIVALLCICIYISAYRSCSHSSNSKPCLGRSA 47


>UniRef50_Q7R9U0 Cluster: CCAAT-box DNA binding protein subunit B;
           n=2; Plasmodium (Vinckeia)|Rep: CCAAT-box DNA binding
           protein subunit B - Plasmodium yoelii yoelii
          Length = 370

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 12/33 (36%), Positives = 23/33 (69%)
 Frame = -1

Query: 447 IKVNSNSSSVLNIYT*HNDLINIYVCNTYNFIN 349
           ++ NSN   + +IY+ +N +  I+ C+TYNF++
Sbjct: 193 LRDNSNCDKIFSIYSSYNCMFPIFKCHTYNFMS 225


>UniRef50_Q22VC9 Cluster: Putative uncharacterized protein; n=4;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1560

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = -1

Query: 456 VLLIKVNSNSSSVLNIYT*HNDLINIYVCNTYNFINYLHCTYYNKQL*YQHYL 298
           +L+IK N N +  L  +T  N L ++Y CNT+ F+  +    +  +L   HYL
Sbjct: 140 ILVIKYNKNKNEQL-FHTFLN-LESLYECNTHKFLKIIRLIIHQSKLCQNHYL 190


>UniRef50_Q97FC3 Cluster: Predicted membrane protein; n=1;
           Clostridium acetobutylicum|Rep: Predicted membrane
           protein - Clostridium acetobutylicum
          Length = 248

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = -1

Query: 246 LTSIYFFKVMKPN*KITNSCISISVCNLIRIIFFFNFYLFVNIKSTRTYLE*KLF 82
           + S+Y  K  K   K   S I   VCN++ I+ F+N Y    I S R Y + +LF
Sbjct: 98  VASLYIIKSCKIKHKAMKSIIFQLVCNIVAIVIFYNSYNI--ITSNRVYTK-RLF 149


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 486,930,248
Number of Sequences: 1657284
Number of extensions: 7914995
Number of successful extensions: 18739
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18702
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)