Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0817
(720 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0161 + 23203786-23203848,23204141-23204180,23204865-232050... 46 2e-05
04_03_0662 + 18479279-18479406,18480445-18480509,18480603-184808... 40 0.002
08_02_1330 + 26191062-26191314,26191894-26191961,26192125-261923... 32 0.53
05_04_0427 + 21161854-21161949,21162089-21162291,21162493-211625... 31 0.92
09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006 30 2.1
03_01_0389 + 3021849-3022136,3022237-3022753,3022835-3022988,302... 30 2.1
01_05_0479 + 22600823-22602478 30 2.1
01_01_0463 - 3424951-3425065,3425191-3425258,3425362-3425586,342... 30 2.1
05_04_0214 - 19111493-19112413,19112674-19112750,19113843-191144... 29 3.7
05_04_0173 + 18724367-18724476,18724570-18724651,18724750-187248... 29 3.7
04_01_0142 + 1640472-1640611,1641618-1641744,1642233-1642425,164... 29 3.7
04_01_0034 - 401208-402923 29 4.9
02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091 29 4.9
08_01_0526 + 4575160-4576719 28 6.5
06_03_0147 + 17236158-17236808 28 6.5
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 28 6.5
01_01_0608 - 4513604-4513701,4513790-4513919,4514027-4514116,451... 28 6.5
06_03_0528 + 21782567-21782651,21783355-21783563,21784095-217842... 28 8.6
04_04_1372 + 33008740-33009130,33009485-33011544 28 8.6
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 28 8.6
>04_04_0161 +
23203786-23203848,23204141-23204180,23204865-23205016,
23205270-23205406,23206356-23206396,23206500-23207098,
23207599-23207679,23208146-23208208,23209141-23209197
Length = 410
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +3
Query: 525 LKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRILK 662
L LG EKY L E+V A L +G+ L+ +GVP+GPR +IL+
Sbjct: 355 LNSLGLEKYVFLFHAEEVDMAALSQMGDSDLKEIGVPMGPRKKILQ 400
>04_03_0662 +
18479279-18479406,18480445-18480509,18480603-18480874,
18483512-18483586,18483668-18483730,18484081-18484103,
18484170-18484260
Length = 238
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 519 LFLKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPL 638
+FLK LG EKY+ + E+V A L ++ + L+ALG+P+
Sbjct: 162 IFLKSLGLEKYSITFQAEEVDMAALRHMTDSDLKALGIPM 201
>08_02_1330 +
26191062-26191314,26191894-26191961,26192125-26192355,
26192736-26192837,26192893-26192955,26193910-26193984
Length = 263
Score = 31.9 bits (69), Expect = 0.53
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Frame = +3
Query: 504 TALMRLFLKKLGYEKYAALLEKEK---------VGAAELPYVGEDRLRALGVPLGPRMRI 656
++L RL LK L EKY+ + E+ V L ++ E+ +++LG+P+GPR +I
Sbjct: 187 SSLDRL-LKSLDVEKYSINFQAEEACLTYLGIQVDMKALLHMNEEDMKSLGIPMGPRKKI 245
Query: 657 L 659
L
Sbjct: 246 L 246
>05_04_0427 +
21161854-21161949,21162089-21162291,21162493-21162571,
21162581-21162940
Length = 245
Score = 31.1 bits (67), Expect = 0.92
Identities = 26/64 (40%), Positives = 29/64 (45%)
Frame = +3
Query: 255 QAVPAAGVARGDAGALRRAPVQRNENPAPRHAGDGHHPRRDRGPQAYVQVPATHPFRSPA 434
Q PAAG+A G A PV P P+ GDG R PQ QV A P +PA
Sbjct: 173 QPTPAAGIAMGHPAAQLSPPVSAPPAP-PQQGGDG----RALNPQP--QVAAAFP--APA 223
Query: 435 AFGS 446
GS
Sbjct: 224 QVGS 227
>09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006
Length = 585
Score = 29.9 bits (64), Expect = 2.1
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +3
Query: 213 APMSTGRNRTTRV*QAVPAAGVARGDA---GALRRAPVQRNENPAPRHAGDGHHPRRDRG 383
A MS GR+R+ R AAGV+ GDA G+ P + AP G H PR D
Sbjct: 190 AVMSAGRSRSYRGGAGGSAAGVSGGDATVCGSRTSGPGGGGSSGAP---GPSHGPRDDSA 246
Query: 384 P--QAYVQVPATHPFRSPAAFGS 446
+ ++P + P P G+
Sbjct: 247 SDLKGKRKMPKSRPPSPPRGGGA 269
>03_01_0389 +
3021849-3022136,3022237-3022753,3022835-3022988,
3023076-3023166,3024556-3024627,3026366-3026689
Length = 481
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +3
Query: 321 RNENPAPRHAGDGHHPRRDRGPQAYVQV--PATHPFRSPA 434
R + P H GHHP R P A V P PF +PA
Sbjct: 215 RRDGHGPGHQQRGHHPSYIRAPLAVVTAAPPPPPPFVNPA 254
>01_05_0479 + 22600823-22602478
Length = 551
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 222 STGRNRTTRV*QAVPAAGVARGDAGALRRAPVQRNENPAPRHAGDGHHPRR 374
+T R++ +R+ + A V + GA A + + A G GHH RR
Sbjct: 151 ATARSKRSRLAASATTAAVVATEEGAAETASASASPSRASGGGGAGHHQRR 201
>01_01_0463 -
3424951-3425065,3425191-3425258,3425362-3425586,
3425669-3425804,3425905-3426107,3426227-3426340,
3426432-3426506,3426625-3426783,3426868-3427038,
3427227-3427274,3427366-3427491,3427611-3427718,
3427800-3427913,3428320-3428496
Length = 612
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 281 CDSSRWNRLLYPCSPVSSCAHWSSVSCP 198
CDS W R L+ C PV W+ S P
Sbjct: 119 CDSHLWERHLFHCVPVPGQNSWTRESSP 146
>05_04_0214 -
19111493-19112413,19112674-19112750,19113843-19114412,
19114605-19114754,19115499-19115643
Length = 620
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 576 VGAAELPYVGEDRLRALGVPLGPRMRILKEAGIHQELHHLSRDDPHN 716
VGA E+ R+LG +G I ++A +H E+ +SRD N
Sbjct: 394 VGAKEIENFISSHQRSLGTAIGQESTI-EQASLHSEITSVSRDAHEN 439
>05_04_0173 +
18724367-18724476,18724570-18724651,18724750-18724840,
18725060-18725172,18725270-18725342,18725445-18725565,
18725665-18725782,18726609-18726748,18726824-18726881,
18727007-18727077,18727181-18727733
Length = 509
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +3
Query: 312 PVQRNENP-APRHAGDGHHPRRDRGPQAYVQVP 407
P Q NP AP AG GHH + RGP + P
Sbjct: 381 PGQPMNNPHAPMAAGPGHHYAKPRGPGGSSRYP 413
>04_01_0142 +
1640472-1640611,1641618-1641744,1642233-1642425,
1642793-1643349
Length = 338
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -3
Query: 712 WGSSLDKWCSS*CMPASLRILILGPSGTPSAR-SLSSPTYGSSAAP 578
WG ++ S MP R + G GTP + SL+ T G +AP
Sbjct: 25 WGGRRERARRSHAMPTGRRRSLQGNDGTPKVKISLTQTTIGKVSAP 70
>04_01_0034 - 401208-402923
Length = 571
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +3
Query: 204 RDGAPMSTGRN-RTTRV*QAVPAAGVARGDAGALRRAPVQRNENPAPRHAGDGHHPRRDR 380
RD + GR+ + V + V A + + + A EN +P H HH ++
Sbjct: 214 RDATAAADGRSSKENAVREIVRQARETVTNRKSKKNAAAIGKENASPVH--HHHHCGKEN 271
Query: 381 GPQAYVQVPATHPFRSPAA 437
P A Q A P R+P A
Sbjct: 272 APPAAKQAAAAPPMRAPLA 290
>02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091
Length = 889
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 284 TCDSSRWNRLLYPCSPVSSCAHWSS 210
+C+ +R N Y CSP S+C + SS
Sbjct: 256 SCERARMNNTSYACSPGSNCRNVSS 280
>08_01_0526 + 4575160-4576719
Length = 519
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +3
Query: 6 AGDARAIRRQLRGLENMYAEVLQLLSVRKPISEHKHSWEARLSSKRR 146
AGDA+ + ++RG ++++ E +++ + + +H W L K R
Sbjct: 235 AGDAKRVLVKIRGTDDVHDEYDDMVAASEEAASIEHPWRNILHRKYR 281
>06_03_0147 + 17236158-17236808
Length = 216
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 12 DARAIRRQLRGLENMYAEVLQLLSVR--KPISEH 107
DARA+ RQL L YA + LS R P+ +H
Sbjct: 73 DARAVSRQLASLRRRYAAAWRRLSSRGVVPVKDH 106
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 552 AALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRILKEAGIHQE 683
AAL+E K V +DR + P GPR R+ K G+ E
Sbjct: 262 AALIEPVKPVRGPPAKVKDDRRKKTSTPAGPRRRMPKNDGLVDE 305
>01_01_0608 -
4513604-4513701,4513790-4513919,4514027-4514116,
4514225-4514330,4514442-4514542,4514678-4514773,
4514860-4514959,4515133-4515269,4515563-4515661,
4515740-4515937,4516058-4516235,4516635-4516690,
4516781-4516933,4517248-4517340,4517422-4517523,
4517609-4517650,4517812-4517855,4518087-4518186,
4518323-4518394,4518499-4518621,4519309-4519452
Length = 753
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -2
Query: 389 LRAAISARMVSISCMT-RCWVLISLDRCATERASVTTCDSSRWNRLLY 249
L A I+ ++ S C+VL+S + A E+A ++ CD + N LLY
Sbjct: 42 LAAVIAELALAYSAQAVACYVLLSTNGLANEQAGISGCDKTVGN-LLY 88
>06_03_0528 +
21782567-21782651,21783355-21783563,21784095-21784232,
21784520-21784734,21784813-21784967,21785010-21785071,
21785832-21785834
Length = 288
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +1
Query: 253 NKRFQRLESHVVTLARSVAHLSSEMRTQHLVMQEMDTIRAEIAALRHMYKSQQH 414
N FQR+ S++ L + + L + HL+ + D A + L H+++ H
Sbjct: 134 NLMFQRIRSYIAFLEQRLEELETVEDINHLIFTDSDI--AVVTDLGHIFEMYPH 185
>04_04_1372 + 33008740-33009130,33009485-33011544
Length = 816
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 278 DSSRWNRLLYPCSPVSSCAHWSSVSCPD 195
DS + N LL+P S S CA S S PD
Sbjct: 755 DSYQGNNLLHPASEGSECAPSSGHSLPD 782
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 264 PAAGVARGDAGALRRAPVQRN-ENPAPRHAGDGHHPR-RDRGPQAYVQVPATHPFRSPAA 437
P++ ++G+A + + P Q+ E P AG+G PR D G +V R+ AA
Sbjct: 36 PSSSSSQGEASSSSQPPPQQQQEEQPPEDAGEGEQPRVPDLGEDLVFEVLRRAEARTLAA 95
Query: 438 FGSV 449
V
Sbjct: 96 AACV 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,107,023
Number of Sequences: 37544
Number of extensions: 398277
Number of successful extensions: 1478
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1478
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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