Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0817
(720 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101099-1|AAI01100.1| 461|Homo sapiens Usher syndrome 1G (auto... 43 0.001
BC101098-1|AAI01099.1| 461|Homo sapiens Usher syndrome 1G (auto... 43 0.001
BC101097-1|AAI01098.1| 461|Homo sapiens Usher syndrome 1G (auto... 43 0.001
BC101096-1|AAI01097.1| 461|Homo sapiens Usher syndrome 1G (auto... 43 0.001
AK091243-1|BAC03619.1| 461|Homo sapiens protein ( Homo sapiens ... 40 0.007
BC010504-1|AAH10504.1| 385|Homo sapiens DDHD2 protein protein. 40 0.012
AK023218-1|BAB14470.1| 385|Homo sapiens protein ( Homo sapiens ... 40 0.012
AB018268-1|BAA34445.1| 573|Homo sapiens KIAA0725 protein protein. 40 0.012
BC063800-1|AAH63800.1| 1000|Homo sapiens SEC23 interacting prote... 37 0.063
AK096041-1|BAC04684.1| 203|Homo sapiens protein ( Homo sapiens ... 37 0.063
AB019435-1|BAA77392.1| 1000|Homo sapiens phospholipase protein. 37 0.063
BC105959-1|AAI05960.1| 398|Homo sapiens ZNF276 protein protein. 31 5.5
AF136715-1|AAD37859.1| 127|Homo sapiens taxol resistant associa... 31 5.5
AF117907-1|AAD30863.1| 1956|Homo sapiens tetrodotoxin-resistant ... 31 5.5
BC132948-1|AAI32949.1| 196|Homo sapiens hypothetical FLJ45964 p... 30 9.6
BC132946-1|AAI32947.1| 196|Homo sapiens hypothetical FLJ45964 p... 30 9.6
AK127861-1|BAC87165.1| 196|Homo sapiens protein ( Homo sapiens ... 30 9.6
>BC101099-1|AAI01100.1| 461|Homo sapiens Usher syndrome 1G
(autosomal recessive) protein.
Length = 461
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +3
Query: 504 TALMRLFLKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRIL 659
T+ + FL L E +AALL +EK+ L + LR++ VPLGPR +IL
Sbjct: 389 TSPLETFLASLHMEDFAALLRQEKIDLEALMLCSDLDLRSISVPLGPRKKIL 440
>BC101098-1|AAI01099.1| 461|Homo sapiens Usher syndrome 1G
(autosomal recessive) protein.
Length = 461
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +3
Query: 504 TALMRLFLKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRIL 659
T+ + FL L E +AALL +EK+ L + LR++ VPLGPR +IL
Sbjct: 389 TSPLETFLASLHMEDFAALLRQEKIDLEALMLCSDLDLRSISVPLGPRKKIL 440
>BC101097-1|AAI01098.1| 461|Homo sapiens Usher syndrome 1G
(autosomal recessive) protein.
Length = 461
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +3
Query: 504 TALMRLFLKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRIL 659
T+ + FL L E +AALL +EK+ L + LR++ VPLGPR +IL
Sbjct: 389 TSPLETFLASLHMEDFAALLRQEKIDLEALMLCSDLDLRSISVPLGPRKKIL 440
>BC101096-1|AAI01097.1| 461|Homo sapiens Usher syndrome 1G
(autosomal recessive) protein.
Length = 461
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +3
Query: 504 TALMRLFLKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRIL 659
T+ + FL L E +AALL +EK+ L + LR++ VPLGPR +IL
Sbjct: 389 TSPLETFLASLHMEDFAALLRQEKIDLEALMLCSDLDLRSISVPLGPRKKIL 440
>AK091243-1|BAC03619.1| 461|Homo sapiens protein ( Homo sapiens
cDNA FLJ33924 fis, clone CTONG2017094, weakly similar to
MYOTROPHIN. ).
Length = 461
Score = 40.3 bits (90), Expect = 0.007
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +3
Query: 504 TALMRLFLKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRIL 659
T+ + FL L +AALL +EK+ L + LR++ VPLGPR +IL
Sbjct: 389 TSPLETFLASLHMGDFAALLRQEKIDLEALMLCSDLDLRSISVPLGPRKKIL 440
>BC010504-1|AAH10504.1| 385|Homo sapiens DDHD2 protein protein.
Length = 385
Score = 39.5 bits (88), Expect = 0.012
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 525 LKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRILKEAGIHQELHHLSRD 704
LKKL ++ + EKEKV L + L+ +G+PLGPR +IL + + R
Sbjct: 68 LKKLQLSEFFDIFEKEKVDKEALALCTDRDLQEIGIPLGPRKKILNYFSTRKNSMGIKRP 127
Query: 705 DP 710
P
Sbjct: 128 AP 129
>AK023218-1|BAB14470.1| 385|Homo sapiens protein ( Homo sapiens
cDNA FLJ13156 fis, clone NT2RP3003490, weakly similar to
Homo sapiens mRNA for putative phospholipase. ).
Length = 385
Score = 39.5 bits (88), Expect = 0.012
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 525 LKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRILKEAGIHQELHHLSRD 704
LKKL ++ + EKEKV L + L+ +G+PLGPR +IL + + R
Sbjct: 68 LKKLQLSEFFDIFEKEKVDKEALALCTDRDLQEIGIPLGPRKKILNYFSTRKNSMGIKRP 127
Query: 705 DP 710
P
Sbjct: 128 AP 129
>AB018268-1|BAA34445.1| 573|Homo sapiens KIAA0725 protein protein.
Length = 573
Score = 39.5 bits (88), Expect = 0.012
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 525 LKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRILKEAGIHQELHHLSRD 704
LKKL ++ + EKEKV L + L+ +G+PLGPR +IL + + R
Sbjct: 256 LKKLQLSEFFDIFEKEKVDKEALALCTDRDLQEIGIPLGPRKKILNYFSTRKNSMGIKRP 315
Query: 705 DP 710
P
Sbjct: 316 AP 317
>BC063800-1|AAH63800.1| 1000|Homo sapiens SEC23 interacting protein
protein.
Length = 1000
Score = 37.1 bits (82), Expect = 0.063
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 525 LKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRI 656
L+ L +Y + EKEK+ L D L+ +G+PLGPR +I
Sbjct: 653 LEALSLSEYFSTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKI 696
>AK096041-1|BAC04684.1| 203|Homo sapiens protein ( Homo sapiens
cDNA FLJ38722 fis, clone KIDNE2010084. ).
Length = 203
Score = 37.1 bits (82), Expect = 0.063
Identities = 24/60 (40%), Positives = 29/60 (48%)
Frame = +3
Query: 258 AVPAAGVARGDAGALRRAPVQRNENPAPRHAGDGHHPRRDRGPQAYVQVPATHPFRSPAA 437
A+P G+ G RA + RNE P P AG GH R +A PA P RSP+A
Sbjct: 54 ALPRGGMIPGTPRGSERAGLVRNEFPVPLAAGPGHKTLRLLPREA---PPAASPRRSPSA 110
>AB019435-1|BAA77392.1| 1000|Homo sapiens phospholipase protein.
Length = 1000
Score = 37.1 bits (82), Expect = 0.063
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 525 LKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRI 656
L+ L +Y + EKEK+ L D L+ +G+PLGPR +I
Sbjct: 653 LEALSLSEYFSTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKI 696
>BC105959-1|AAI05960.1| 398|Homo sapiens ZNF276 protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 5.5
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -3
Query: 481 AASPCPGY*MNTDPNAAGDLNGCVAGTCTYA*GPRSLRGWCPSPA*RGAGFSFRW 317
AA PCP + + P+ A C G T A + W P+PA R + ++ RW
Sbjct: 4 AAGPCPTFRGHCPPSTAASSRSC--GAATRA----TTTPWIPAPAARPSCWTVRW 52
>AF136715-1|AAD37859.1| 127|Homo sapiens taxol resistant associated
protein protein.
Length = 127
Score = 30.7 bits (66), Expect = 5.5
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 270 AGVARGDAGALRRAPVQRNENPAPRHAGDGHHPRRDRGPQAYVQVP 407
AG+ + +P+ N P P+ G G HP + GP+A + P
Sbjct: 63 AGLVKMSRKPRASSPLSNNHPPTPKRRGSGRHP-LNPGPEALSKFP 107
>AF117907-1|AAD30863.1| 1956|Homo sapiens tetrodotoxin-resistant
voltage-gated sodium channel protein.
Length = 1956
Score = 30.7 bits (66), Expect = 5.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 273 GVARGDAGALRRAPVQRNENPAPRHAGDGHHP 368
G G G L R+P+ + NP RH D H P
Sbjct: 540 GGGAGQQGPLPRSPLPQPSNPDSRHGEDEHQP 571
>BC132948-1|AAI32949.1| 196|Homo sapiens hypothetical FLJ45964
protein.
Length = 196
Score = 29.9 bits (64), Expect = 9.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 314 RCATERASVTTCDSSRWNRLLYPCSPVSSCAHWSSV 207
RC+ E + T C +R + L+ PC+P S S+
Sbjct: 112 RCSLEGSCPTVCAGARMSALVQPCTPESEALTLGSI 147
>BC132946-1|AAI32947.1| 196|Homo sapiens hypothetical FLJ45964
protein.
Length = 196
Score = 29.9 bits (64), Expect = 9.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 314 RCATERASVTTCDSSRWNRLLYPCSPVSSCAHWSSV 207
RC+ E + T C +R + L+ PC+P S S+
Sbjct: 112 RCSLEGSCPTVCAGARMSALVQPCTPESEALTLGSI 147
>AK127861-1|BAC87165.1| 196|Homo sapiens protein ( Homo sapiens
cDNA FLJ45964 fis, clone PLACE7014396. ).
Length = 196
Score = 29.9 bits (64), Expect = 9.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 314 RCATERASVTTCDSSRWNRLLYPCSPVSSCAHWSSV 207
RC+ E + T C +R + L+ PC+P S S+
Sbjct: 112 RCSLEGSCPTVCAGARMSALVQPCTPESEALTLGSI 147
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,768,096
Number of Sequences: 237096
Number of extensions: 2039874
Number of successful extensions: 10255
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10255
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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