Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0817
         (720 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83103-1|CAB05474.1|  358|Caenorhabditis elegans Hypothetical pr...    31   0.63 
Z92773-1|CAB07131.1|  395|Caenorhabditis elegans Hypothetical pr...    31   0.83 
Z84574-6|CAE17784.1|  174|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z82268-9|CAD89738.1|  509|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z69302-5|CAA93262.1|  189|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AL023835-17|CAD89760.1|  509|Caenorhabditis elegans Hypothetical...    28   7.7  
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical...    28   7.7  
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ...    28   7.7  
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ...    28   7.7  
AC006672-7|AAM98004.1|  668|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z83103-1|CAB05474.1|  358|Caenorhabditis elegans Hypothetical
           protein D1025.1 protein.
          Length = 358

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +2

Query: 359 TPSAQRSRPSGICTSPSNTSVQVTSGIRIRIHSVTRTXXXXXXXXXEMNRTNEIVSEETR 538
           TP+A   +PS    SP  T  + TSG   R+ S  +T         E +   E +S+ T+
Sbjct: 50  TPAALSHQPSSSNPSPKKTPTKRTSGTARRVSSSIKTTPALKIDSLESSEETESLSKSTK 109


>Z92773-1|CAB07131.1|  395|Caenorhabditis elegans Hypothetical
           protein W08E3.3 protein.
          Length = 395

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +3

Query: 546 KYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRILKEAGIHQEL 686
           K  A ++    GA  +P+ G   L+ L +P   R + LKE G+   L
Sbjct: 243 KIKAWIDTNDAGAVLIPFSGAFELKLLDMPEDERQKYLKEQGVTSNL 289


>Z84574-6|CAE17784.1|  174|Caenorhabditis elegans Hypothetical
           protein F33E2.7 protein.
          Length = 174

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +2

Query: 317 PAK*EPSTSSCRRWTPSAQRSRPSGICTSPSNTSVQVTS 433
           P+K +PST++    TP+   + P+   T+P+ T+   T+
Sbjct: 80  PSKPKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTT 118


>Z82268-9|CAD89738.1|  509|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1b protein.
          Length = 509

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 273 GVARGDAGALRRAPVQRNENPAPRHAGDGHHPRRDRGPQ 389
           G ARG+   L R+   R  +P PR A     PRR   P+
Sbjct: 209 GGARGNDSPLHRSSAARRHSPPPRRASP---PRRTSSPK 244


>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 273 GVARGDAGALRRAPVQRNENPAPRHAGDGHHPRRDRGPQ 389
           G ARG+   L R+   R  +P PR A     PRR   P+
Sbjct: 209 GGARGNDSPLHRSSAARRHSPPPRRASP---PRRTSSPK 244


>Z69302-5|CAA93262.1|  189|Caenorhabditis elegans Hypothetical
           protein F40F8.10 protein.
          Length = 189

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
 Frame = +1

Query: 265 QRLESHV--VTLARSVAHLSSEMRTQHL-VMQEMDTIRAEIAALRHMYKSQQHIRSGHQR 435
           +RL++ V  + LA+S+ H    ++  H+ V +++  + + I  L     SQ+HI    Q 
Sbjct: 107 RRLQTQVFKLGLAKSIHHARILIKQHHIRVRRQVVDVPSFIVRL----DSQKHIDFSLQ- 161

Query: 436 HSDPYSFSNPDRVKRLTKFFGD 501
              PY    P RVKR T   GD
Sbjct: 162 --SPYGGGRPGRVKRRTLRKGD 181


>AL023835-17|CAD89760.1|  509|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1b protein.
          Length = 509

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 273 GVARGDAGALRRAPVQRNENPAPRHAGDGHHPRRDRGPQ 389
           G ARG+   L R+   R  +P PR A     PRR   P+
Sbjct: 209 GGARGNDSPLHRSSAARRHSPPPRRASP---PRRTSSPK 244


>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 273 GVARGDAGALRRAPVQRNENPAPRHAGDGHHPRRDRGPQ 389
           G ARG+   L R+   R  +P PR A     PRR   P+
Sbjct: 209 GGARGNDSPLHRSSAARRHSPPPRRASP---PRRTSSPK 244


>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
           protein R148.3a protein.
          Length = 1115

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 274 ESHVVTLARSVAHLSSEMRTQHLVMQEMD 360
           E  ++ L + +AHL SE++T H   QE +
Sbjct: 574 EPELLALRQQLAHLQSELQTAHAQRQEFE 602


>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
           protein R148.3b protein.
          Length = 1130

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 274 ESHVVTLARSVAHLSSEMRTQHLVMQEMD 360
           E  ++ L + +AHL SE++T H   QE +
Sbjct: 586 EPELLALRQQLAHLQSELQTAHAQRQEFE 614


>AC006672-7|AAM98004.1|  668|Caenorhabditis elegans Hypothetical
           protein K08D12.6 protein.
          Length = 668

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = +3

Query: 264 PAAGVARGDAGALRRAPVQRNENPAPRHAGDGHHPRRDRGPQAYVQVPATHPFRSPA 434
           PAA  A  D+G   +     +E   P  A     P      QA V VPA  P  +PA
Sbjct: 339 PAAAPAATDSGYRSKRNAYGDEQVTPAPAAAAEAPADAPVEQAPVAVPAPAPTAAPA 395


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,778,498
Number of Sequences: 27780
Number of extensions: 295645
Number of successful extensions: 1185
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)