Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0816
         (681 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-979|AAF46221.2| 1027|Drosophila melanogaster CG14431-PA...    34   0.21 
BT023501-1|AAY84901.1|  919|Drosophila melanogaster LD27033p pro...    29   4.5  
AE014296-1769|AAN11939.1|  919|Drosophila melanogaster CG8108-PB...    29   4.5  
AE014296-1768|AAF50193.1|  919|Drosophila melanogaster CG8108-PA...    29   4.5  
AE013599-1058|AAF58816.2| 2376|Drosophila melanogaster CG18408-P...    29   5.9  

>AE014298-979|AAF46221.2| 1027|Drosophila melanogaster CG14431-PA
           protein.
          Length = 1027

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 20/66 (30%), Positives = 36/66 (54%)
 Frame = +3

Query: 321 RKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKESRSENSG 500
           +K  ++  +  +  L  ++ +   TG D+DES+++++K  F N    L +   S S  SG
Sbjct: 159 KKLSNQQNKQGVRRLPAAYTTTSTTGNDEDESVIAKNKAKFPNALQRL-KLFGSSSRESG 217

Query: 501 TSTRIL 518
           T+ RIL
Sbjct: 218 TTRRIL 223


>BT023501-1|AAY84901.1|  919|Drosophila melanogaster LD27033p
           protein.
          Length = 919

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
 Frame = +3

Query: 255 NVENPSQIPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHK-SYGYTGIDKDESIVSQD 431
           N  N S     R   +Y   N R   + H  N   N  N+H  S G  G +      S+D
Sbjct: 21  NNRNSSNYVNTRTQGNYRPNNGRYENNYHNNN---NRYNNHNNSGGGAGGNSHYDNRSRD 77

Query: 432 KVAFTNDNGNLYQSKESRSENSGTSTR 512
           K    N +   Y+S  S  + S  S+R
Sbjct: 78  KFTHHNSSSGRYESSSSSHKRSYDSSR 104


>AE014296-1769|AAN11939.1|  919|Drosophila melanogaster CG8108-PB,
           isoform B protein.
          Length = 919

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
 Frame = +3

Query: 255 NVENPSQIPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHK-SYGYTGIDKDESIVSQD 431
           N  N S     R   +Y   N R   + H  N   N  N+H  S G  G +      S+D
Sbjct: 21  NNRNSSNYVNTRTQGNYRPNNGRYENNYHNNN---NRYNNHNNSGGGAGGNSHYDNRSRD 77

Query: 432 KVAFTNDNGNLYQSKESRSENSGTSTR 512
           K    N +   Y+S  S  + S  S+R
Sbjct: 78  KFTHHNSSSGRYESSSSSHKRSYDSSR 104


>AE014296-1768|AAF50193.1|  919|Drosophila melanogaster CG8108-PA,
           isoform A protein.
          Length = 919

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
 Frame = +3

Query: 255 NVENPSQIPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHK-SYGYTGIDKDESIVSQD 431
           N  N S     R   +Y   N R   + H  N   N  N+H  S G  G +      S+D
Sbjct: 21  NNRNSSNYVNTRTQGNYRPNNGRYENNYHNNN---NRYNNHNNSGGGAGGNSHYDNRSRD 77

Query: 432 KVAFTNDNGNLYQSKESRSENSGTSTR 512
           K    N +   Y+S  S  + S  S+R
Sbjct: 78  KFTHHNSSSGRYESSSSSHKRSYDSSR 104


>AE013599-1058|AAF58816.2| 2376|Drosophila melanogaster CG18408-PA,
           isoform A protein.
          Length = 2376

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
 Frame = +3

Query: 276 IPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVA----- 440
           +P +R+       N+R       +N   N   +H+       D++E    Q ++A     
Sbjct: 1   MPNNRNRNRNRNRNKRNRNQNQNQNPSQNQNENHQQQAEGAEDREEQQDFQTQIAVAQSS 60

Query: 441 -FTNDNGNLYQSKESRSENSGTSTRIL 518
            F +DNGN        +ENS   T  L
Sbjct: 61  SFVDDNGNSGSVSNGPTENSEEVTNTL 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,732,547
Number of Sequences: 53049
Number of extensions: 589358
Number of successful extensions: 1935
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1935
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)