Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0815
         (736 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0230 + 21717225-21717301,21717888-21717972,21718045-217181...    29   5.1  
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528...    28   8.8  

>09_06_0230 +
           21717225-21717301,21717888-21717972,21718045-21718165,
           21718244-21718368,21718940-21718984,21719082-21719345,
           21720067-21720111,21720182-21720212,21721644-21721693,
           21722433-21724310,21724406-21724564,21724821-21724939,
           21726917-21727059,21727670-21727735,21728184-21728317,
           21728454-21728591,21728927-21729186,21729295-21729406,
           21730727-21730909
          Length = 1344

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/56 (32%), Positives = 22/56 (39%)
 Frame = +1

Query: 337 LNKKSNGRNRATDGPLTATTLLAAVRRECKRRSLTIIKVFLSPLVTADPRKWPKRT 504
           L  K NG  + TDG    TT     +   K     I K+  SP VT    K  + T
Sbjct: 127 LTLKQNGDTKKTDGTTIQTTCKYCSKDGAKLYPSVIFKMLTSPRVTLSRSKLHRNT 182


>02_05_0540 +
           29852109-29852195,29852304-29852477,29852585-29852841,
           29852954-29853125,29853513-29853551,29853647-29853715,
           29853795-29853911,29854190-29854401,29854578-29854736,
           29854810-29855009,29855100-29855266,29855346-29855442,
           29855560-29855651,29855861-29856139
          Length = 706

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = -2

Query: 327 SLTLDINNRPATWNAPGMLFKARGLRRGRIQKRIRSMYSTYFHEAFPTIEVWQKALEIIS 148
           SL  D      T N PG++ K RGL     ++ I +  S  + +A   IE      E ++
Sbjct: 32  SLKRDSGGHATTKNLPGLMKKLRGLNEVISEEEIAAHLSQSYPDADQEIEFESFLREYLN 91

Query: 147 LKGFV 133
           L+  V
Sbjct: 92  LQSRV 96


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,686,466
Number of Sequences: 37544
Number of extensions: 328734
Number of successful extensions: 863
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)