Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0815
         (736 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058338-1|AAL13567.1|  689|Drosophila melanogaster GH11223p pro...    41   0.002
AE014134-2986|AAF53716.2|  689|Drosophila melanogaster CG33120-P...    41   0.002
BT024957-1|ABE01187.1|  355|Drosophila melanogaster IP15602p pro...    29   6.6  
AE014134-485|AAN10390.1|  184|Drosophila melanogaster CG3119-PB,...    29   6.6  
AE014134-484|AAF51199.2|  355|Drosophila melanogaster CG3119-PA,...    29   6.6  
AE014296-424|AAF47622.2| 1076|Drosophila melanogaster CG32301-PA...    29   8.7  

>AY058338-1|AAL13567.1|  689|Drosophila melanogaster GH11223p
           protein.
          Length = 689

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 20/86 (23%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
 Frame = +3

Query: 12  YYILVRVHHLLLSGAKSINIGDLLLVEQLKQTDRM----AQEYTQQSP-LTKLFPTPSAI 176
           YYIL+++HHL+++  + +++ ++LL++   +   M      ++   SP L++    P  I
Sbjct: 188 YYILIKLHHLIIAEEEDLHVSEMLLLQDPHKKTTMTLSDGLDWDSSSPKLSRFVRKPEHI 247

Query: 177 PQLWEKLHENMSNTWNEFVSEYDPVE 254
            +L   +   +   W +F+ E++ +E
Sbjct: 248 SRLINHIIHLIICRWQKFIYEFESLE 273


>AE014134-2986|AAF53716.2|  689|Drosophila melanogaster CG33120-PA
           protein.
          Length = 689

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 20/86 (23%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
 Frame = +3

Query: 12  YYILVRVHHLLLSGAKSINIGDLLLVEQLKQTDRM----AQEYTQQSP-LTKLFPTPSAI 176
           YYIL+++HHL+++  + +++ ++LL++   +   M      ++   SP L++    P  I
Sbjct: 188 YYILIKLHHLIIAEEEDLHVSEMLLLQDPHKKTTMTLSDGLDWDSSSPKLSRFVRKPEHI 247

Query: 177 PQLWEKLHENMSNTWNEFVSEYDPVE 254
            +L   +   +   W +F+ E++ +E
Sbjct: 248 SRLINHIIHLIICRWQKFIYEFESLE 273


>BT024957-1|ABE01187.1|  355|Drosophila melanogaster IP15602p
           protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 10/43 (23%), Positives = 18/43 (41%)
 Frame = +3

Query: 117 AQEYTQQSPLTKLFPTPSAIPQLWEKLHENMSNTWNEFVSEYD 245
           +++Y     +  + PT      LW K  E   + W  +  +YD
Sbjct: 97  SEDYEPLGVVGVVEPTGGGYEDLWNKTREGFRHVWEHYAGDYD 139


>AE014134-485|AAN10390.1|  184|Drosophila melanogaster CG3119-PB,
           isoform B protein.
          Length = 184

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 10/43 (23%), Positives = 18/43 (41%)
 Frame = +3

Query: 117 AQEYTQQSPLTKLFPTPSAIPQLWEKLHENMSNTWNEFVSEYD 245
           +++Y     +  + PT      LW K  E   + W  +  +YD
Sbjct: 97  SEDYEPLGVVGVVEPTGGGYEDLWNKTREGFRHVWEHYAGDYD 139


>AE014134-484|AAF51199.2|  355|Drosophila melanogaster CG3119-PA,
           isoform A protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 10/43 (23%), Positives = 18/43 (41%)
 Frame = +3

Query: 117 AQEYTQQSPLTKLFPTPSAIPQLWEKLHENMSNTWNEFVSEYD 245
           +++Y     +  + PT      LW K  E   + W  +  +YD
Sbjct: 97  SEDYEPLGVVGVVEPTGGGYEDLWNKTREGFRHVWEHYAGDYD 139


>AE014296-424|AAF47622.2| 1076|Drosophila melanogaster CG32301-PA
           protein.
          Length = 1076

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 256 PSCFEKHAG-CVPRRRSVIDIQREALRELNKKSNGRNRATDGPLTA 390
           PS F  HA  CV +   +I+I RE  +  NKK + R     G + A
Sbjct: 345 PSYFPTHANACVNQALDMIEISREVSKRRNKKIDLRIGVHSGEILA 390


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,754,545
Number of Sequences: 53049
Number of extensions: 572331
Number of successful extensions: 1516
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1515
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)