Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0815
         (736 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77659-5|CAB01168.1|  953|Caenorhabditis elegans Hypothetical pr...    37   0.013
U20861-15|AAA62290.2|  162|Caenorhabditis elegans Hypothetical p...    31   1.1  
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p...    29   4.5  
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AL021175-3|CAA15963.2|  467|Caenorhabditis elegans Hypothetical ...    28   6.0  

>Z77659-5|CAB01168.1|  953|Caenorhabditis elegans Hypothetical
           protein F23B12.7 protein.
          Length = 953

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +1

Query: 208 CRIHGTNSFLNTTPSKPSCFEKHAGCVPRRRSVIDIQREALRELNKKSNGRNR 366
           C+  GT   ++  P     F  H  C+P  R +I   + ALREL + S+G  R
Sbjct: 194 CKKQGTRDVVDIIPILEDVFINH--CLPENRKLIPFSKRALRELTELSSGNQR 244


>U20861-15|AAA62290.2|  162|Caenorhabditis elegans Hypothetical
           protein C28H8.2 protein.
          Length = 162

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +2

Query: 500 EHLDYHDIDCFNVEITVSRSR*NFSFKRTKEYWSRKTA*HFNVEVRGISALCVR 661
           EH +Y+D      +  +        F R K Y+ R T  H+N E+R I A+  +
Sbjct: 64  EHFNYYDDQVKGTDCHIQEE---LDFARFKSYFDRYTRTHYNPEIRIIFAIMTK 114


>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
           protein ZK617.1a protein.
          Length = 6839

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/22 (50%), Positives = 20/22 (90%)
 Frame = +1

Query: 289 PRRRSVIDIQREALRELNKKSN 354
           PRRRS ID++RE+++E+ +K++
Sbjct: 627 PRRRSSIDMRRESVQEILEKTS 648


>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
           protein ZK617.1a protein.
          Length = 6839

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/22 (50%), Positives = 20/22 (90%)
 Frame = +1

Query: 289 PRRRSVIDIQREALRELNKKSN 354
           PRRRS ID++RE+++E+ +K++
Sbjct: 627 PRRRSSIDMRRESVQEILEKTS 648


>AL021175-3|CAA15963.2|  467|Caenorhabditis elegans Hypothetical
           protein Y6E2A.4 protein.
          Length = 467

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 108 DRMAQEYTQQSPL-TKLFPTPSAIPQLWEKLHENMSNTWNEFVSEYD 245
           ++    +T ++P+ +K+  TP    +   K HE+M N+ N+ + + D
Sbjct: 214 EKNGTNHTTKNPIPSKIIVTPQENDEAITKFHESMKNSENKIIRKID 260


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,573,176
Number of Sequences: 27780
Number of extensions: 304408
Number of successful extensions: 923
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)