Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0814
(699 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_1010 - 13194002-13194339,13194421-13194573,13194661-131948... 105 4e-23
07_03_1578 + 27872636-27872840,27872928-27873175,27873215-278732... 71 3e-20
03_02_0999 - 13105030-13105434,13105716-13105850,13105933-131061... 85 4e-17
03_02_0998 - 13097675-13098079,13098307-13098441,13098522-130987... 85 4e-17
12_02_1038 - 25596027-25596393,25596492-25596660,25597283-255973... 35 0.054
09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,851... 30 2.0
11_08_0035 - 27838495-27838655,27838750-27838897,27838987-278391... 28 6.2
11_08_0021 + 27716298-27716478,27717137-27717309,27717408-277175... 28 6.2
04_01_0275 + 3648866-3649951 28 8.2
>03_02_1010 -
13194002-13194339,13194421-13194573,13194661-13194809,
13194932-13195184,13195282-13195469,13195684-13195841,
13196093-13196307,13196410-13196614
Length = 552
Score = 105 bits (251), Expect = 4e-23
Identities = 54/97 (55%), Positives = 65/97 (67%)
Frame = +3
Query: 234 KEEKTIKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHFHSLIKGLTLKACSV 413
KE K K +LGV++PK+G+ ISE I C V E+LRG+R HF I L
Sbjct: 87 KEGKKAKYSLGVVEPKVGSHISEVTGIPCQSNEFVQELLRGVRLHFDRFISELKKSDLEK 146
Query: 414 AQLGLGHSYSRARVKFNVHRVDNMIIQSIALLINLTK 524
AQLGLGHSYSRA+VKFNV+RVDNM+IQ+I LL L K
Sbjct: 147 AQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDK 183
Score = 87.0 bits (206), Expect = 1e-17
Identities = 33/62 (53%), Positives = 49/62 (79%)
Frame = +2
Query: 509 DQLDKDVNTFSMRIREWYSYHFPELVSIVPENHLYTKCAEFIKDRKTLCEESLEPLTEIL 688
D LDKD+N+FSMR+REW+ +HFPELV IV +N++Y K A++IKD+ L E+ + L +++
Sbjct: 179 DTLDKDINSFSMRVREWFGWHFPELVKIVNDNYIYAKLADYIKDKSELAEKDISKLADLI 238
Query: 689 GD 694
GD
Sbjct: 239 GD 240
Score = 72.9 bits (171), Expect = 2e-13
Identities = 37/86 (43%), Positives = 49/86 (56%)
Frame = +1
Query: 1 FEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENINAV 180
FE ++G+ LF +E+ + V SV DL RF V L AF P SA+ AL NA+
Sbjct: 7 FESASGYGLFHAYGIDEIGQSVDAVRASVVDLDRFGKAVKLAAFTPFSSAVDALNQCNAI 66
Query: 181 SEGILPEDLNLFLEGGLPKRKKRSNA 258
SEGI+ ++L FLE LPK K+ A
Sbjct: 67 SEGIMTDELRSFLELNLPKPKEGKKA 92
>07_03_1578 +
27872636-27872840,27872928-27873175,27873215-27873295,
27873665-27873822,27874391-27874450,27874655-27874873,
27875100-27875201,27875352-27875500,27875582-27875734,
27875839-27876194
Length = 576
Score = 70.9 bits (166), Expect = 9e-13
Identities = 36/86 (41%), Positives = 50/86 (58%)
Frame = +1
Query: 1 FEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENINAV 180
FE ++G+ALF +E+ + SV +LQRF+ V L F P SA+ AL NA+
Sbjct: 7 FESASGYALFHAHGVDEIGQGVDAARASVLELQRFSKAVKLAGFSPFSSAVDALNQCNAI 66
Query: 181 SEGILPEDLNLFLEGGLPKRKKRSNA 258
SEGI+ ++L FLE LPK K+ A
Sbjct: 67 SEGIMTDELRSFLELNLPKVKEGKKA 92
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 20/82 (24%)
Frame = +2
Query: 509 DQLDKDVNTFSMRI--------------------REWYSYHFPELVSIVPENHLYTKCAE 628
D LDKD+N+FSMR+ REWYS+HFPELV IV +N++Y+K A+
Sbjct: 217 DTLDKDINSFSMRVSLFFPLFYAMINSGGESLPPREWYSWHFPELVKIVNDNYVYSKIAK 276
Query: 629 FIKDRKTLCEESLEPLTEILGD 694
F+ ++ L E+ + L +I+GD
Sbjct: 277 FVVNKSDLAEKDIPALADIIGD 298
Score = 61.7 bits (143), Expect(2) = 3e-20
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +3
Query: 414 AQLGLGHSYSRARVKFNVHRVDNMIIQSIALLINLTK 524
AQLGLGHSYSRA+VKFNV+RVDNM+IQ+I LL L K
Sbjct: 185 AQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDK 221
Score = 54.4 bits (125), Expect(2) = 3e-20
Identities = 28/67 (41%), Positives = 39/67 (58%)
Frame = +3
Query: 234 KEEKTIKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHFHSLIKGLTLKACSV 413
KE K K ++GV++PK+G+ ISEA I C V E+LRG+R HF I L + +
Sbjct: 87 KEGKKAKYSVGVMEPKVGSHISEATGIPCQCNEFVQELLRGVRLHFDHFIDQLKVVDFTF 146
Query: 414 AQLGLGH 434
A + GH
Sbjct: 147 ALVSTGH 153
>03_02_0999 -
13105030-13105434,13105716-13105850,13105933-13106133,
13106374-13106673,13106764-13106964,13107246-13107410,
13107484-13107663,13108171-13108212,13108327-13108404
Length = 568
Score = 85.4 bits (202), Expect = 4e-17
Identities = 45/91 (49%), Positives = 56/91 (61%)
Frame = +3
Query: 258 TLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHFHSLIKGLTLKACSVAQLGLGHS 437
TL V D KLG AI E L+I C H AV E++RG+R LI GL + LGL HS
Sbjct: 84 TLAVADSKLGNAIKEKLKIDCLHNSAVMELMRGLRNQLTELISGLGAQDLGPMSLGLSHS 143
Query: 438 YSRARVKFNVHRVDNMIIQSIALLINLTKML 530
SR ++KF+ +VD MIIQ+I LL +L K L
Sbjct: 144 LSRYKLKFSPEKVDTMIIQAIGLLDDLDKEL 174
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = +2
Query: 509 DQLDKDVNTFSMRIREWYSYHFPELVSIVPENHLYTKCAEFIKDRKTLCEESLEPLTEIL 688
D LDK++NT++MR+REWY +HFPEL IV +N Y K + + DR ESL+ +EIL
Sbjct: 168 DDLDKELNTYAMRVREWYGWHFPELTKIVADNIQYAKVVKMMGDRTN--AESLD-FSEIL 224
Query: 689 GD 694
D
Sbjct: 225 SD 226
>03_02_0998 -
13097675-13098079,13098307-13098441,13098522-13098722,
13099060-13099359,13099449-13099649,13099932-13100096,
13100170-13100349,13100896-13100937,13101040-13101117
Length = 568
Score = 85.4 bits (202), Expect = 4e-17
Identities = 45/91 (49%), Positives = 56/91 (61%)
Frame = +3
Query: 258 TLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHFHSLIKGLTLKACSVAQLGLGHS 437
TL V D KLG AI E L+I C H AV E++RG+R LI GL + LGL HS
Sbjct: 84 TLAVADSKLGNAIKEKLKIDCLHNSAVMELMRGLRNQLTELISGLGAQDLGPMSLGLSHS 143
Query: 438 YSRARVKFNVHRVDNMIIQSIALLINLTKML 530
SR ++KF+ +VD MIIQ+I LL +L K L
Sbjct: 144 LSRYKLKFSPEKVDTMIIQAIGLLDDLDKEL 174
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = +2
Query: 509 DQLDKDVNTFSMRIREWYSYHFPELVSIVPENHLYTKCAEFIKDRKTLCEESLEPLTEIL 688
D LDK++NT++MR+REWY +HFPEL IV +N Y K + + DR ESL+ +EIL
Sbjct: 168 DDLDKELNTYAMRVREWYGWHFPELTKIVADNIQYAKVVKMMGDRTN--AESLD-FSEIL 224
Query: 689 GD 694
D
Sbjct: 225 SD 226
>12_02_1038 -
25596027-25596393,25596492-25596660,25597283-25597349,
25597617-25597794,25599157-25599228,25599311-25599717,
25600035-25600740,25600829-25600998,25601963-25602022,
25602385-25602435
Length = 748
Score = 35.1 bits (77), Expect = 0.054
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 410 CGTAWSWPLILTSSCQVQCSPSGQHDHTINSPADQLDKDVNTFSMRIR 553
C T ++ P +L +CQ Q P+ Q ++ +N P+D + D N S +R
Sbjct: 290 CATDYT-PQMLPGACQSQLVPNDQINNKLNEPSDYMPMDHNVSSQNLR 336
>09_02_0393 +
8510089-8510274,8510450-8510806,8510889-8511011,
8511209-8511523,8511576-8511682,8512559-8512629,
8512952-8513029,8513390-8513454,8514224-8514274,
8514373-8514414,8514785-8515105,8515154-8517880
Length = 1480
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +3
Query: 234 KEEKTIKCTLGVLDP--KLGAAISEALEIQCTHTGAVPEILRGIRYHFHSLIKGLTLKAC 407
KE + +CT +LDP G + L I G + R ++ H + K ++
Sbjct: 606 KESRISRCTSSLLDPLEVYGREDEKKLIISSLLDGCLTFKKRRLKEHEYETCKAGAVRLI 665
Query: 408 SVAQLGLGHSYSRARVKFNVHRVDN 482
S+ +G + AR+ +N RV N
Sbjct: 666 SIVAMGGMGKTTLARLVYNDARVQN 690
>11_08_0035 -
27838495-27838655,27838750-27838897,27838987-27839192,
27839291-27839972,27840074-27840247,27840963-27841181,
27841281-27841400,27841540-27841680,27841762-27841801,
27841969-27842129,27842506-27842589,27842659-27842721,
27842808-27842885,27842980-27842984,27843228-27843313,
27843354-27843544,27844089-27844166,27844255-27844365,
27844757-27844927,27845026-27845198,27845748-27845928
Length = 1090
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Frame = -2
Query: 359 YASQNLRDCSCMRAL----NF-QGLADGCS*LGIQYTECAFDRFFLFGRPPS 219
Y S R CSCM L NF G D L + + + AF RF PS
Sbjct: 807 YPSATWRACSCMHTLLHTPNFSHGAEDTRMTLAVSFAQAAFSRFKSVSDSPS 858
>11_08_0021 +
27716298-27716478,27717137-27717309,27717408-27717578,
27717967-27718077,27718168-27718245,27718642-27718832,
27718873-27718958,27719202-27719206,27719301-27719378,
27719465-27719527,27719597-27719680,27720049-27720209,
27720377-27720416,27720774-27720893,27720993-27721211,
27721927-27722100,27722202-27722883,27722986-27723185,
27723269-27723407,27723502-27723677
Length = 1043
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Frame = -2
Query: 359 YASQNLRDCSCMRAL----NFQ-GLADGCS*LGIQYTECAFDRFFLFGRPPS 219
Y S R CSCM L NF G D L + + + AF RF PS
Sbjct: 760 YPSATWRACSCMHTLLHTPNFSLGAEDTRMTLAVSFAQAAFSRFKSVSDSPS 811
>04_01_0275 + 3648866-3649951
Length = 361
Score = 27.9 bits (59), Expect = 8.2
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 34 VAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSA--IVALENINAVSEGILPEDL 207
V E +E AFLP+ +ESV L V + +P ++A LE I +S+ ++ L
Sbjct: 95 VRELDEALAFLPEFQESVLILHIATNVFYGLCIEPDQNAASFKQLEAIKTLSDYMV--FL 152
Query: 208 NLFLEGGLPKRKKRS 252
G LP K RS
Sbjct: 153 VAVRPGMLPGLKLRS 167
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,709,090
Number of Sequences: 37544
Number of extensions: 436993
Number of successful extensions: 1171
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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