Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0814
         (699 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71181-4|CAA94897.1|  486|Caenorhabditis elegans Hypothetical pr...    98   6e-21
AF043704-1|AAK21475.1|  487|Caenorhabditis elegans Hypothetical ...    71   8e-13
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p...    30   1.4  
AC006827-4|AAF60881.1|  579|Caenorhabditis elegans Hypothetical ...    30   1.8  
AC006708-15|AAF60425.1|  504|Caenorhabditis elegans Hypothetical...    30   1.8  
Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AC026301-5|AAK68894.1|  745|Caenorhabditis elegans Hypothetical ...    27   9.8  

>Z71181-4|CAA94897.1|  486|Caenorhabditis elegans Hypothetical
           protein K07C5.4 protein.
          Length = 486

 Score = 97.9 bits (233), Expect = 6e-21
 Identities = 52/103 (50%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
 Frame = +3

Query: 231 SKEEKTIKCTLGVLDPKLGAAISEAL-EIQCTHTGAVPEILRGIRYHFHSLIKGLTLKAC 407
           S  +K     LG+ D KL  +++EA  +++    G + EILRG R HF  L K L   + 
Sbjct: 85  SLPKKKKHVVLGINDSKLAGSLTEAFPDLKLVFGGVITEILRGTRVHFERLAKNLPHHSL 144

Query: 408 SVAQLGLGHSYSRARVKFNVHRVDNMIIQSIALLINLTKMLTL 536
           S AQL LGHSYSR++VKF+VHRVDNM+IQSIALL  L K + L
Sbjct: 145 SKAQLSLGHSYSRSKVKFDVHRVDNMVIQSIALLDQLDKDINL 187



 Score = 77.8 bits (183), Expect = 7e-15
 Identities = 34/82 (41%), Positives = 54/82 (65%)
 Frame = +1

Query: 1   FEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENINAV 180
           +EH+AG+AL ++ EF++    L +V+ +  D  +F+ +V L +F P K+   ALEN N++
Sbjct: 10  YEHAAGYALMKIKEFDDAGLILQEVDAAHADGYKFSQIVELASFDPFKNTEAALENCNSI 69

Query: 181 SEGILPEDLNLFLEGGLPKRKK 246
           SEG+   DL  FL+  LPK+KK
Sbjct: 70  SEGLAHPDLTNFLQKSLPKKKK 91



 Score = 72.1 bits (169), Expect = 3e-13
 Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
 Frame = +2

Query: 509 DQLDKDVNTFSMRIREWYSYHFPELVSIVPENHLYTKCAEFIKDRKTLCE-ESLE-PLTE 682
           DQLDKD+N F MRIREWYSYH+PEL  + P+ + Y++ A  I DR  + E E+LE  + E
Sbjct: 179 DQLDKDINLFGMRIREWYSYHYPELFRLAPDQYKYSRLAVAILDRNKMAENENLENEILE 238

Query: 683 IL 688
           IL
Sbjct: 239 IL 240


>AF043704-1|AAK21475.1|  487|Caenorhabditis elegans Hypothetical
           protein W01B11.3 protein.
          Length = 487

 Score = 70.9 bits (166), Expect = 8e-13
 Identities = 36/108 (33%), Positives = 62/108 (57%)
 Frame = +3

Query: 207 ESIPRRWSSKEEKTIKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHFHSLIK 386
           +++ +   S  ++T K  +G  D KLG  I E L + C H  ++ E++RG+R H   L+ 
Sbjct: 70  KTLKKLLKSSVDETEKLAVG--DAKLGNLIKEKLSLNCVHDSSINELMRGVRAHIEDLL- 126

Query: 387 GLTLKACSVAQLGLGHSYSRARVKFNVHRVDNMIIQSIALLINLTKML 530
               +  +   L + HS +R +VKFN  ++D MI+Q+++LL +L K L
Sbjct: 127 AEHKEEMNAMNLAVAHSLARYKVKFNPEKIDTMIVQAVSLLDDLDKEL 174



 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 21/56 (37%), Positives = 32/56 (57%)
 Frame = +2

Query: 509 DQLDKDVNTFSMRIREWYSYHFPELVSIVPENHLYTKCAEFIKDRKTLCEESLEPL 676
           D LDK++N + MR+REWY +HFPEL   + ++  Y K  + I  R+      L  +
Sbjct: 168 DDLDKELNNYVMRVREWYGWHFPELGKTIQDHQAYAKIIKAIGMRQNCINTDLSSI 223


>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical
           protein M01F1.7 protein.
          Length = 1034

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 485 DHTINSPADQLDKDVNTFSMRIREWYSYHFPEL 583
           D + ++PAD    D NTFS  I      H+P+L
Sbjct: 341 DFSPDNPADSKTTDTNTFSSTIETCVQRHYPQL 373


>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
           protein M01F1.7 protein.
          Length = 1034

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 485 DHTINSPADQLDKDVNTFSMRIREWYSYHFPEL 583
           D + ++PAD    D NTFS  I      H+P+L
Sbjct: 341 DFSPDNPADSKTTDTNTFSSTIETCVQRHYPQL 373


>AC006827-4|AAF60881.1|  579|Caenorhabditis elegans Hypothetical
           protein Y81B9A.1 protein.
          Length = 579

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = +2

Query: 260 TRCTGSQARSS-HQRGPGNSVHAYR-SSPGDFERHTL-SLPLAHQRPYPQSMQCGTAWSW 430
           T C G   RS  H RG    V  Y+  S G      L  LP+    P  Q+MQ  TAW +
Sbjct: 31  TYCGGCNTRSHMHPRGECQRVGCYQCGSMGHATAQALCDLPIGGVTPEAQTMQQETAWGF 90


>AC006708-15|AAF60425.1|  504|Caenorhabditis elegans Hypothetical
           protein Y110A7A.8 protein.
          Length = 504

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 506 ADQLDKDVNTFSMRIREWYSYHFPELVSIVPENHLYTKCAEFI 634
           A  +D ++N     +R+ Y   FPEL ++VP    Y    + +
Sbjct: 109 AADIDNEINVIHKFVRDKYEKRFPELETLVPNALTYLATVQLL 151


>Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical
           protein C34F6.9 protein.
          Length = 1181

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 193 LPEDLNLFLEGGLPK-RKKRSNAHSVYWIPS*EQPSARPWKFSARIQEQSRR 345
           LP + N+  + G  +   +RS++       S E PS +  +FS R+++ SRR
Sbjct: 783 LPREKNIGKDSGKSRLASQRSSSRRSSAPFSEESPSTKKTRFSTRVEQYSRR 834


>AC026301-5|AAK68894.1|  745|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.3 protein.
          Length = 745

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -1

Query: 156 NDRRLVWLESY*SHNSIKTLQICHGLFDLRQESR*LFKFSNAEQRKA 16
           N ++L W+++      IK L++ H  F++ ++   L  +SN E  KA
Sbjct: 631 NGKQLFWVQNMAFELLIKKLKMHHLKFEMEEQWNFLKNYSNKETDKA 677


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,754,378
Number of Sequences: 27780
Number of extensions: 373398
Number of successful extensions: 981
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)