Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0809
(726 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0042 + 295608-296222,298479-298925 103 1e-22
06_01_0033 - 346273-347355 101 4e-22
08_01_0567 - 5040389-5040631,5042124-5042264 34 0.100
02_04_0579 - 24050219-24050254,24050255-24050398,24051566-24051706 30 2.2
01_06_0072 + 26184592-26184828,26184934-26185107,26185591-261857... 30 2.2
03_05_0327 - 23154014-23154942,23155169-23155316,23155606-231566... 29 2.8
01_01_0854 + 6662533-6662652,6662727-6662996,6663118-6663171,666... 29 2.8
04_04_0672 + 27164628-27164792,27164903-27164965,27165298-271654... 29 3.8
10_08_0925 + 21604871-21605021,21605562-21605881,21606899-216078... 29 5.0
07_03_1721 - 29023979-29025295 29 5.0
05_07_0204 - 28397597-28397737,28398225-28398342,28399215-283993... 29 5.0
01_06_0276 - 28084746-28085003,28085103-28085357,28085531-280857... 29 5.0
09_03_0056 - 11936264-11939677 28 6.6
03_02_0789 + 11207769-11208059,11208370-11208557,11208701-112097... 28 6.6
02_01_0430 - 3136181-3136248,3136544-3136923,3137545-3137963 28 6.6
03_03_0085 - 14341047-14341258,14343783-14343858,14344691-14344777 28 8.7
02_05_0645 - 30596133-30596627,30596707-30596784 28 8.7
02_05_0171 - 26441007-26441918 28 8.7
>02_01_0042 + 295608-296222,298479-298925
Length = 353
Score = 103 bits (248), Expect = 1e-22
Identities = 44/72 (61%), Positives = 61/72 (84%)
Frame = +3
Query: 510 SRLDLVQRNTDVLKQIIPQLIKYSPDTILVIASNPVDILTYVTWKISGLPKHRVIGSGTN 689
SRL+L+QRN + ++I+P L ++SP+ +L+I SNPVD+LTYV WK+SG P RVIGSGTN
Sbjct: 124 SRLNLLQRNVALFRKIVPALAEHSPEALLLIVSNPVDVLTYVAWKLSGFPASRVIGSGTN 183
Query: 690 LDSARFRYLLSD 725
LDS+RFR+LL++
Sbjct: 184 LDSSRFRFLLAE 195
Score = 95.1 bits (226), Expect = 5e-20
Identities = 41/87 (47%), Positives = 64/87 (73%)
Frame = +1
Query: 250 RNWSKVTIVGVGQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMMDLQHGSAFMRNAKI 429
R +K++++G G VGMA A ++LT+++ + IALVD + DKL+GEM+DLQH +AF+ ++
Sbjct: 37 RRLTKISVIGAGNVGMAIAQTILTRDMADEIALVDAVPDKLRGEMLDLQHAAAFLPRVRL 96
Query: 430 QSSTDYSITAGSKICVVTAGVRQREGD 510
S TD ++T GS + +VTAG RQ G+
Sbjct: 97 VSDTDLAVTRGSDLAIVTAGARQIPGE 123
>06_01_0033 - 346273-347355
Length = 360
Score = 101 bits (243), Expect = 4e-22
Identities = 43/72 (59%), Positives = 60/72 (83%)
Frame = +3
Query: 510 SRLDLVQRNTDVLKQIIPQLIKYSPDTILVIASNPVDILTYVTWKISGLPKHRVIGSGTN 689
+RL+L+QRN + ++I+P + SP+++LVI SNPVD+LTYV WK+SG P RVIGSGTN
Sbjct: 123 TRLNLLQRNVSLFRKIVPAAAEASPESVLVIVSNPVDVLTYVAWKLSGFPASRVIGSGTN 182
Query: 690 LDSARFRYLLSD 725
LDS+RFR+LL++
Sbjct: 183 LDSSRFRFLLAE 194
Score = 90.6 bits (215), Expect = 1e-18
Identities = 40/87 (45%), Positives = 61/87 (70%)
Frame = +1
Query: 250 RNWSKVTIVGVGQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMMDLQHGSAFMRNAKI 429
R K++++G G VGMA A ++LTQ++ + I L+D +ADK++GEM+DLQH +AF+ I
Sbjct: 36 RRLIKISVIGAGNVGMAIAQTILTQDLADEIVLIDAVADKVRGEMLDLQHAAAFLPRVNI 95
Query: 430 QSSTDYSITAGSKICVVTAGVRQREGD 510
S T+ S+T S + +VTAG RQ G+
Sbjct: 96 VSGTEVSLTRSSDLVIVTAGARQIPGE 122
>08_01_0567 - 5040389-5040631,5042124-5042264
Length = 127
Score = 34.3 bits (75), Expect = 0.100
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Frame = +3
Query: 510 SRLDLVQRN--TDVLKQIIPQLIKYSPDTILVIASNPV--DILTYV 635
++L+L++ N +L +I+P L + SP+ LV+ S+P D+LTYV
Sbjct: 3 TKLELMRSNYLKKLLTEIVPALAENSPEAALVVVSDPPVDDVLTYV 48
>02_04_0579 - 24050219-24050254,24050255-24050398,24051566-24051706
Length = 106
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 257 QFRPPSRARAGTASSGTPSCGSSR 186
QFRPPS A A ASS + C + R
Sbjct: 9 QFRPPSTAAAAAASSASRRCAARR 32
>01_06_0072 +
26184592-26184828,26184934-26185107,26185591-26185759,
26185863-26185924,26186506-26186630,26186735-26186852,
26187760-26187897
Length = 340
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 510 SRLDLVQRNTDVLKQIIPQLIKYSPDTILVIASNPVDILTYV---TWKISGLPKHRVIGS 680
+R DL N ++K + + KY P+ ++ + SNPV+ + +K +G + +
Sbjct: 112 TRDDLFNINAGIVKNLCTAIAKYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFG 171
Query: 681 GTNLDSAR 704
T LD R
Sbjct: 172 VTTLDVVR 179
>03_05_0327 -
23154014-23154942,23155169-23155316,23155606-23156622,
23156753-23157217,23160258-23161247
Length = 1182
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +3
Query: 540 DVLKQIIPQLIKYSPDTILVIASNPVDILTYVTWKISGLPKHRVIGSGTNLDS 698
++LK ++P+L D L + S+ VD+L + + ++V+G GT L S
Sbjct: 444 EILKVLLPRLSDMVSDPALSVRSSAVDLLLAIR-DLRSFQFNKVVGLGTLLSS 495
>01_01_0854 +
6662533-6662652,6662727-6662996,6663118-6663171,
6663723-6663784,6663940-6664008,6664082-6664133,
6664287-6664460
Length = 266
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +1
Query: 187 RELPQDGVPEEAVPARAREGGRNWSKVTIVGVGQVGMAAAFSMLTQNVTNNIALVDMMA- 363
R ++G PE A + R GGR W + G AAA ++ Q +A + M
Sbjct: 57 RASDEEGPPEPA--GQGRGGGRAWPSLDASSCGLALAAAAGVLMLQGSQQALAGTEFMGM 114
Query: 364 DKLKGEMMDLQHG--SAFM 414
+ G++ D+ G SAF+
Sbjct: 115 QDVVGDLGDISTGFASAFL 133
>04_04_0672 +
27164628-27164792,27164903-27164965,27165298-27165408,
27165454-27165537,27166081-27166194,27166901-27167494,
27167604-27167675,27167761-27167997
Length = 479
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 261 QGDHCRGRSGWDGRSFLYADAECYE*--HRSSRHDG*QIERRDDGPAARISIHEERQ 425
+GD R RS W + E E HR+SR DG Q ERR+DG R+ ++ Q
Sbjct: 44 RGDE-RSRSTWAEVVSDHKGGEAEERPDHRNSRRDGRQ-ERREDGDWERVDGRKQHQ 98
>10_08_0925 +
21604871-21605021,21605562-21605881,21606899-21607897,
21608085-21608126,21608190-21608249,21608915-21608959
Length = 538
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 649 LIFHVTYVRISTGLLAITNIVSGLYFISCGIICLRT 542
++F +T+V T L + I SG +F G ICL T
Sbjct: 435 VVFLMTFVIGQTFLAVLCRIKSGTFFFFAGWICLMT 470
>07_03_1721 - 29023979-29025295
Length = 438
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 627 SEYPRGYWRSPILCPDCTLSAA 562
S +P G W SP + P+C++SA+
Sbjct: 312 SPWPNGAWSSPWIQPNCSVSAS 333
>05_07_0204 -
28397597-28397737,28398225-28398342,28399215-28399339,
28399683-28399744,28399867-28400035,28400594-28400767,
28400856-28401089
Length = 340
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 510 SRLDLVQRNTDVLKQIIPQLIKYSPDTILVIASNPVDILTYV---TWKISGLPKHRVIGS 680
+R DL N ++K + + KY P+ ++ + SNPV+ + +K +G + +
Sbjct: 111 TRDDLFNINAGIVKGLCTAISKYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFG 170
Query: 681 GTNLDSAR 704
T LD R
Sbjct: 171 VTTLDVVR 178
>01_06_0276 - 28084746-28085003,28085103-28085357,28085531-28085798,
28085948-28086253,28086369-28086643,28087034-28087252,
28087486-28089015,28089236-28089397,28089512-28089666,
28090195-28091064,28091363-28091832,28091917-28091981,
28092105-28092448,28092531-28092710,28092817-28092920,
28093053-28093162,28093648-28093744,28094138-28094238,
28094324-28094476,28094561-28094674,28094795-28094884,
28094960-28095307
Length = 2157
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +1
Query: 250 RNWSKVTIVGVGQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMMDLQHGSAFMRNAKI 429
R KV I+G G G+AAA + N + V AD++ G MM +G M+ KI
Sbjct: 1794 RTGKKVAIIGSGPAGLAAADQL---NKMGHFVTVFERADRIGGLMM---YGVPNMKTDKI 1847
Query: 430 Q 432
+
Sbjct: 1848 E 1848
>09_03_0056 - 11936264-11939677
Length = 1137
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 223 VPARAREGGRNWSKVTIVGVGQVGMAA 303
VP+ R G +N S +TIVG G +G A
Sbjct: 323 VPSSGRAGQKNLSVLTIVGDGGIGKTA 349
>03_02_0789 +
11207769-11208059,11208370-11208557,11208701-11209785,
11210163-11210288,11210367-11210605,11210688-11210806,
11210894-11211014
Length = 722
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 537 TDVLKQIIPQLIKYSPDTILVIASNPVDILTYVTWKISGLPKHRVIG 677
TDVL ++ +++K PD LV+ S ++ + T+ SG P +V G
Sbjct: 195 TDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQTY-FSGAPLMKVPG 240
>02_01_0430 - 3136181-3136248,3136544-3136923,3137545-3137963
Length = 288
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/65 (20%), Positives = 33/65 (50%)
Frame = +1
Query: 253 NWSKVTIVGVGQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMMDLQHGSAFMRNAKIQ 432
N++ + I+ + S + + N+ L+D+M++K GE++D + + + ++
Sbjct: 59 NFTSLKIINLKHNNFTGELSKVNFSRLPNLKLLDLMSNKFTGEILDSIYRCSNLTTLQLS 118
Query: 433 SSTDY 447
S+ Y
Sbjct: 119 SNKFY 123
>03_03_0085 - 14341047-14341258,14343783-14343858,14344691-14344777
Length = 124
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 158 MATNNTNGHCENYHKMESLKKLFQPVHEKVDE 253
M T+ GHC +Y + SL+++ K+DE
Sbjct: 1 MTTSRPTGHCTSYESVASLEEVQNKNTHKLDE 32
>02_05_0645 - 30596133-30596627,30596707-30596784
Length = 190
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +1
Query: 118 QDTTVGQVLNNI*DGDKQHQRALRELPQDGVPE----EAVPARAREGGRNWSK 264
+ TT+G ++ D D++ Q+ E +DG E A A E GR W +
Sbjct: 36 RSTTLGTLMGVSFDDDEEQQQQQGEAARDGGEESERPRAAAAEEEEDGRRWRR 88
>02_05_0171 - 26441007-26441918
Length = 303
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 370 LKGEMMDLQHGSA---FMRNAKIQSSTDYSITAGSKICVVTAGVRQREGDLVSISCR 531
+K E D GS+ F+ ++ ++ T +T S VT G+R+ EG+ V+++ R
Sbjct: 91 VKPESQDSYDGSSIGSFLASSSSEAGTPGEVT--STEATVTPGIREGEGEAVAVASR 145
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,401,667
Number of Sequences: 37544
Number of extensions: 400159
Number of successful extensions: 1216
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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