BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0807 (735 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_887| Best HMM Match : SCP (HMM E-Value=7.1e-25) 33 0.32 SB_32805| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55 SB_34393| Best HMM Match : RVT_1 (HMM E-Value=2e-36) 31 0.73 SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30) 31 0.97 SB_17882| Best HMM Match : ShTK (HMM E-Value=1e-05) 31 0.97 SB_57943| Best HMM Match : SCP (HMM E-Value=5.70048e-42) 30 1.7 SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23) 29 5.2 SB_17970| Best HMM Match : DUF273 (HMM E-Value=7.5) 29 5.2 SB_7926| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2 SB_55473| Best HMM Match : SCP (HMM E-Value=1.6e-22) 28 6.8 SB_4689| Best HMM Match : Dicty_CTDC (HMM E-Value=5.8) 28 6.8 SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 28 9.0 SB_40168| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0 SB_20452| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0 SB_864| Best HMM Match : Sulfotransfer_1 (HMM E-Value=6.4e-05) 28 9.0 >SB_887| Best HMM Match : SCP (HMM E-Value=7.1e-25) Length = 147 Score = 32.7 bits (71), Expect = 0.32 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = +3 Query: 249 VSAKAAKWASSDNDFHNPDRSIASERFSTGENLYWYMTSNKNHKINPDSALESWFNEHEN 428 ++A A WA+ + S A R GENLY S +IN ++ W++E Sbjct: 30 LAADAQVWANHIAKNGRLEHSSADSRPGQGENLYMCSPS----EINAGDIVDEWYSEISK 85 Query: 429 YKF 437 YKF Sbjct: 86 YKF 88 >SB_32805| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 224 Score = 31.9 bits (69), Expect = 0.55 Identities = 20/59 (33%), Positives = 32/59 (54%) Frame = +3 Query: 330 STGENLYWYMTSNKNHKINPDSALESWFNEHENYKFAPLKSSDFQKTGKKQIAHYTQMV 506 S GENLY T++ D A++SW++E +NY + +D+ I H+TQ+V Sbjct: 124 SDGENLYNKGTTSGTVSTCQD-AVDSWYSEIDNYDY-----TDYTNHPGGVIGHFTQIV 176 >SB_34393| Best HMM Match : RVT_1 (HMM E-Value=2e-36) Length = 1198 Score = 31.5 bits (68), Expect = 0.73 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = -1 Query: 690 SP*GLLQSPAPQTRRLLGSPD-LYGILPR*FPAGP*LHTTKNDFICAVREVPIAQPTRSL 514 +P GL + Q RR LGSP Y P P +TT +P+ QP+ S Sbjct: 1092 TPKGLRRRNRRQVRRALGSPQPTYAATQYRAPILPERYTTPEAIQSQSSPLPVQQPSVSE 1151 Query: 513 SDTPSECSG 487 +T +E SG Sbjct: 1152 KETFNEMSG 1160 >SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30) Length = 1191 Score = 31.1 bits (67), Expect = 0.97 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = -1 Query: 690 SP*GLLQSPAPQTRRLLGSPD-LYGILPR*FPAGP*LHTTKNDFICAVREVPIAQPTRSL 514 +P GL + Q RR LGSP Y P P +TT +P+ QP+ S Sbjct: 1090 TPQGLRRRNRRQVRRALGSPQPTYAATQYRAPILPERYTTPEAIQSQSSPLPVQQPSVSD 1149 Query: 513 SDTPSECSG 487 +T +E SG Sbjct: 1150 KETFNEMSG 1158 >SB_17882| Best HMM Match : ShTK (HMM E-Value=1e-05) Length = 387 Score = 31.1 bits (67), Expect = 0.97 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +2 Query: 512 DSDRVGCAIGTSRTAQMKSFFVVCNYGPAGNYLGNIPYKSG 634 D+ R+G AI + S ++V Y P GNY G + G Sbjct: 343 DTRRLGVAIARIKRGLWYSTYIVARYSPPGNYNGEFTQQVG 383 >SB_57943| Best HMM Match : SCP (HMM E-Value=5.70048e-42) Length = 632 Score = 30.3 bits (65), Expect = 1.7 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = +3 Query: 336 GENLYWYMTSNKNHKINPDSALESWFNEHENYKFAPLKSSDFQKTG-KKQIAHYTQMV 506 GEN+Y IN + A++ W+NE NY DF K G + H+TQ+V Sbjct: 55 GENIY---VQFGQADINGEEAVDKWYNEVNNY--------DFGKPGFQSNTGHFTQVV 101 >SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23) Length = 1189 Score = 28.7 bits (61), Expect = 5.2 Identities = 16/63 (25%), Positives = 31/63 (49%) Frame = +3 Query: 249 VSAKAAKWASSDNDFHNPDRSIASERFSTGENLYWYMTSNKNHKINPDSALESWFNEHEN 428 ++++A KWA N + D+ + GEN+++ N + A+ +W+ E +N Sbjct: 370 LASEAQKWA---NHLASIDQMERDPLTNGGENIFYMYGGNPREAC--ERAVRNWYQEVKN 424 Query: 429 YKF 437 Y F Sbjct: 425 YDF 427 >SB_17970| Best HMM Match : DUF273 (HMM E-Value=7.5) Length = 271 Score = 28.7 bits (61), Expect = 5.2 Identities = 12/42 (28%), Positives = 22/42 (52%) Frame = +2 Query: 92 FNLLIVGSYSHYRATIYDSSSTVTICGVNK*PRVKYLDSRQR 217 F + GSY+ Y+ T +S+ +V C ++ PR+ + R Sbjct: 63 FGRSLKGSYASYQLTFPESNFSVFFCDIDSVPRIAITSTADR 104 >SB_7926| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 358 Score = 28.7 bits (61), Expect = 5.2 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = +2 Query: 551 TAQMKSFFVVCNYGPAGNYLGNIPYKSGEPSNRLVCGAGDCSK 679 T+ + FVV Y P GN +G P ++ +P GA +C++ Sbjct: 259 TSSSGAHFVVARYTPPGNVMGQFP-ENVKPKTGGGIGAQECAQ 300 >SB_55473| Best HMM Match : SCP (HMM E-Value=1.6e-22) Length = 141 Score = 28.3 bits (60), Expect = 6.8 Identities = 15/59 (25%), Positives = 27/59 (45%) Frame = +3 Query: 261 AAKWASSDNDFHNPDRSIASERFSTGENLYWYMTSNKNHKINPDSALESWFNEHENYKF 437 A WA + + +R+ GEN+ +H + AL+ W+NE E+Y++ Sbjct: 50 AQAWAGKLAREGRLEHASREDRYYKGENI-----CRMSHHFDIGDALQIWYNESESYQY 103 >SB_4689| Best HMM Match : Dicty_CTDC (HMM E-Value=5.8) Length = 530 Score = 28.3 bits (60), Expect = 6.8 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Frame = -3 Query: 346 KFSPVENLSDAMLLSGLWKSLSDEAHFAAF--ALTPYPKSCISFGSLPAVQ--IFHPW 185 K+S V + ML S LW+SL +H+ F A+ CIS + + IF W Sbjct: 216 KYSYVFSSPKKMLNSSLWRSLLSSSHYREFLVAIAIDEAHCISHWGIQTTKKNIFKVW 273 >SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) Length = 2119 Score = 27.9 bits (59), Expect = 9.0 Identities = 12/42 (28%), Positives = 21/42 (50%) Frame = +3 Query: 309 SIASERFSTGENLYWYMTSNKNHKINPDSALESWFNEHENYK 434 SI S +++ E + N+N++ D AL WF + Y+ Sbjct: 315 SITSTKYNIDEESNGAESGNENNEDEDDEALPQWFRQLSGYE 356 >SB_40168| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1554 Score = 27.9 bits (59), Expect = 9.0 Identities = 20/64 (31%), Positives = 30/64 (46%) Frame = -1 Query: 435 ICSFHVH*TKIRGRNLG*SCDFYCSSYTSTSSRPLKTFRMLCSCLDYGNHCPTKPTLQLS 256 +C+F TK+RG ++ D Y S ++ S P +++ CL H T QLS Sbjct: 682 LCNFEFLLTKLRGTSIQNVLDDYASYLSAKPSDP--DVKLMNECLRLSVHPLTVEPAQLS 739 Query: 255 R*LL 244 LL Sbjct: 740 TQLL 743 >SB_20452| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1324 Score = 27.9 bits (59), Expect = 9.0 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Frame = +1 Query: 109 RKLQPLSCDDIRQFVNGHNLRR--EQIAKGEISGQPAATQMKYMIWDKELARKLQ 267 RK +P+S D+ QF + NLR + E Q ++TQ K + + R Q Sbjct: 861 RKCRPVSTGDLDQFYDSENLREFTSITEENEDKDQKSSTQSKLKMAKDSMTRAWQ 915 >SB_864| Best HMM Match : Sulfotransfer_1 (HMM E-Value=6.4e-05) Length = 524 Score = 27.9 bits (59), Expect = 9.0 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = +3 Query: 381 INPDSALESWFNEHENYKFAPLKSSD 458 + P +ESW ++H N+K A L S+ Sbjct: 226 MEPPLGIESWLDQHMNFKQADLHDSE 251 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,144,038 Number of Sequences: 59808 Number of extensions: 545588 Number of successful extensions: 1264 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1185 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1263 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1974037988 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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