Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0806
         (795 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
 Frame = -1

Query: 627 FLFYTEFYL*MKLKHYFYSEFHYWLSRPYYYYKNC*LYRQLLF-----PFAIGNTSTFSN 463
           F+ +T  +L     +YFY  F   L   Y+YY        LLF      F +        
Sbjct: 89  FIIFTVHFL--LCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCI 146

Query: 462 WYFFIAIIL*TTN 424
           +YF+ A I+ T +
Sbjct: 147 YYFYCAFIIFTVH 159


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = +2

Query: 125 QNDAESTPPSDEMNKSLEKNDSTNNVPQFQLDAVSPIQKKRG 250
           +N+A   PP   +    E   + + +P    D V+   ++RG
Sbjct: 727 ENNAPPPPPPPRVESFAETVRTVSKIPPLYKDLVAKRCEERG 768


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 700 SVASFLSLFGTNHSFEAFVESMLDFSIL 617
           S++ FLSLFGT  +  A   ++L F +L
Sbjct: 153 SLSEFLSLFGT-ETCPAIGSAILIFVVL 179


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 700 SVASFLSLFGTNHSFEAFVESMLDFSIL 617
           S++ FLSLFGT  +  A   ++L F +L
Sbjct: 153 SLSEFLSLFGT-ETCPAIGSAILIFVVL 179


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +3

Query: 666 LVPKSERNDATEIVSVNEKEDDSNVKCGVCLEA 764
           +VP+ E +    +  + +K + SN+   + LEA
Sbjct: 334 IVPEKEESSRQAVNLICDKFERSNIGVKIALEA 366


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +3

Query: 666 LVPKSERNDATEIVSVNEKEDDSNVKCGVCLEA 764
           +VP+ E +    +  + +K + SN+   + LEA
Sbjct: 334 IVPEKEESSRQAVNLICDKFERSNIGVKIALEA 366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,699
Number of Sequences: 336
Number of extensions: 3529
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)