Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0803
         (693 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80847-2|AAB37982.2|  475|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr...    27   9.6  
U64845-6|AAC48028.1|  556|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>U80847-2|AAB37982.2|  475|Caenorhabditis elegans Hypothetical
           protein C17H11.1 protein.
          Length = 475

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 50  MQYGTLCALKYCFSKYYINYVYLNAINGMQINSVQCLYLVAL 175
           + Y  +   K  F  YY  Y+    ING  I+ + C +L+ L
Sbjct: 104 IHYCLVSTTKMAFVMYYTTYIEAPFINGFLISGLYCSFLLTL 145


>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
            F18C12.1 protein.
          Length = 4171

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/28 (39%), Positives = 21/28 (75%)
 Frame = +1

Query: 16   VTEARRIRSEPDAIRHVVCAEILFL*IL 99
            ++E R +R+ P+A+R ++ A +LF+ IL
Sbjct: 2895 LSEIRSLRAPPEAVRDILQAVLLFMGIL 2922


>U64845-6|AAC48028.1|  556|Caenorhabditis elegans Hypothetical
           protein F45F2.5 protein.
          Length = 556

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 50  MQYGTLCALKYCFSKYYINYVYLNAINGMQINSVQCLY 163
           ++Y   C L Y  +  Y  Y+YL  +    INS  C+Y
Sbjct: 67  LEYSIFCVLMYAVAVAYFLYLYLFVLYPNVINS--CIY 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,566,599
Number of Sequences: 27780
Number of extensions: 312137
Number of successful extensions: 655
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)