Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0801
(519 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related... 153 5e-38
U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related... 153 5e-38
AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-relat... 153 5e-38
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 64 4e-11
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 64 4e-11
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 64 4e-11
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 64 4e-11
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 30 0.86
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 30 0.86
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 30 0.86
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 30 1.1
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 29 2.0
Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z83114-9|CAB05553.2| 941|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z83114-8|CAJ76944.1| 875|Caenorhabditis elegans Hypothetical pr... 27 6.1
AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical... 27 6.1
AL021483-8|CAI79173.1| 941|Caenorhabditis elegans Hypothetical ... 27 6.1
AF045646-8|AAK29830.1| 541|Caenorhabditis elegans Udp-glucurono... 27 6.1
U23510-5|AAY55872.1| 110|Caenorhabditis elegans Hypothetical pr... 27 8.0
>U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related
protein protein1, isoform a protein.
Length = 705
Score = 153 bits (372), Expect = 5e-38
Identities = 78/108 (72%), Positives = 92/108 (85%), Gaps = 3/108 (2%)
Frame = +2
Query: 5 DKSQTLLQIITKFASAYCSTIEGTARNIETTELCGGARICYIFHETFGRTLDSIHPLVGL 184
DK++TLLQIIT+FA+AY STIEGTARNIETTELCGGARICYIFH+TFGR+L+S++PL L
Sbjct: 330 DKNRTLLQIITRFATAYTSTIEGTARNIETTELCGGARICYIFHDTFGRSLESVNPLENL 389
Query: 185 TRMDILTAIRNATGPRPALFVPE---DLLSFWSSDRLEDWKTLRYVVL 319
T++DILTAIRNATGPRPALFVPE +LL RLE+ +LR V L
Sbjct: 390 TQLDILTAIRNATGPRPALFVPEVSFELLVKRQIQRLEE-PSLRCVEL 436
Score = 134 bits (324), Expect = 4e-32
Identities = 63/88 (71%), Positives = 74/88 (84%)
Frame = +1
Query: 256 SFELLVKRQIRRLEDPSLRCVELVHEEMQRIVQHCGTEVQQEMLRFPRLHQRIVDVVTQL 435
SFELLVKRQI+RLE+PSLRCVELVHEEMQR+VQHCG QQEM+RFPRL+ +I +VV+ +
Sbjct: 414 SFELLVKRQIQRLEEPSLRCVELVHEEMQRMVQHCGFTTQQEMIRFPRLYDKINEVVSGV 473
Query: 436 LRTRLPPTNSMVEKLVGIELAYINRSTP 519
L+ RL PTN +VE LV IELAYIN P
Sbjct: 474 LKERLKPTNELVENLVAIELAYINTKHP 501
>U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related
protein protein1, isoform b protein.
Length = 712
Score = 153 bits (372), Expect = 5e-38
Identities = 78/108 (72%), Positives = 92/108 (85%), Gaps = 3/108 (2%)
Frame = +2
Query: 5 DKSQTLLQIITKFASAYCSTIEGTARNIETTELCGGARICYIFHETFGRTLDSIHPLVGL 184
DK++TLLQIIT+FA+AY STIEGTARNIETTELCGGARICYIFH+TFGR+L+S++PL L
Sbjct: 330 DKNRTLLQIITRFATAYTSTIEGTARNIETTELCGGARICYIFHDTFGRSLESVNPLENL 389
Query: 185 TRMDILTAIRNATGPRPALFVPE---DLLSFWSSDRLEDWKTLRYVVL 319
T++DILTAIRNATGPRPALFVPE +LL RLE+ +LR V L
Sbjct: 390 TQLDILTAIRNATGPRPALFVPEVSFELLVKRQIQRLEE-PSLRCVEL 436
Score = 134 bits (324), Expect = 4e-32
Identities = 63/88 (71%), Positives = 74/88 (84%)
Frame = +1
Query: 256 SFELLVKRQIRRLEDPSLRCVELVHEEMQRIVQHCGTEVQQEMLRFPRLHQRIVDVVTQL 435
SFELLVKRQI+RLE+PSLRCVELVHEEMQR+VQHCG QQEM+RFPRL+ +I +VV+ +
Sbjct: 414 SFELLVKRQIQRLEEPSLRCVELVHEEMQRMVQHCGFTTQQEMIRFPRLYDKINEVVSGV 473
Query: 436 LRTRLPPTNSMVEKLVGIELAYINRSTP 519
L+ RL PTN +VE LV IELAYIN P
Sbjct: 474 LKERLKPTNELVENLVAIELAYINTKHP 501
>AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-related
protein protein.
Length = 705
Score = 153 bits (372), Expect = 5e-38
Identities = 78/108 (72%), Positives = 92/108 (85%), Gaps = 3/108 (2%)
Frame = +2
Query: 5 DKSQTLLQIITKFASAYCSTIEGTARNIETTELCGGARICYIFHETFGRTLDSIHPLVGL 184
DK++TLLQIIT+FA+AY STIEGTARNIETTELCGGARICYIFH+TFGR+L+S++PL L
Sbjct: 330 DKNRTLLQIITRFATAYTSTIEGTARNIETTELCGGARICYIFHDTFGRSLESVNPLENL 389
Query: 185 TRMDILTAIRNATGPRPALFVPE---DLLSFWSSDRLEDWKTLRYVVL 319
T++DILTAIRNATGPRPALFVPE +LL RLE+ +LR V L
Sbjct: 390 TQLDILTAIRNATGPRPALFVPEVSFELLVKRQIQRLEE-PSLRCVEL 436
Score = 134 bits (324), Expect = 4e-32
Identities = 63/88 (71%), Positives = 74/88 (84%)
Frame = +1
Query: 256 SFELLVKRQIRRLEDPSLRCVELVHEEMQRIVQHCGTEVQQEMLRFPRLHQRIVDVVTQL 435
SFELLVKRQI+RLE+PSLRCVELVHEEMQR+VQHCG QQEM+RFPRL+ +I +VV+ +
Sbjct: 414 SFELLVKRQIQRLEEPSLRCVELVHEEMQRMVQHCGFTTQQEMIRFPRLYDKINEVVSGV 473
Query: 436 LRTRLPPTNSMVEKLVGIELAYINRSTP 519
L+ RL PTN +VE LV IELAYIN P
Sbjct: 474 LKERLKPTNELVENLVAIELAYINTKHP 501
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 64.5 bits (150), Expect = 4e-11
Identities = 32/91 (35%), Positives = 50/91 (54%)
Frame = +1
Query: 235 GFIRP*GSFELLVKRQIRRLEDPSLRCVELVHEEMQRIVQHCGTEVQQEMLRFPRLHQRI 414
G P +FE + K+QI RL++PSL+CV+LV E+ +++ C M R+PRL +
Sbjct: 404 GLFTPDMAFEAIAKKQITRLKEPSLKCVDLVVNELANVIRQCA----DTMARYPRLRDEL 459
Query: 415 VDVVTQLLRTRLPPTNSMVEKLVGIELAYIN 507
+V +R R + +V ELAY+N
Sbjct: 460 ERIVVSHMREREQIAKQQIGLIVDYELAYMN 490
Score = 54.0 bits (124), Expect = 6e-08
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 KSQTLLQIITKFASAYCSTIEGT-ARNIETTELCGGARICYIFHETFGRTLDSIHPLVGL 184
K++ LLQ++T+F + +IEG+ A+ + T EL GGARI +FHE F + +
Sbjct: 327 KTKALLQMVTQFNADIERSIEGSSAKLVSTNELSGGARINRLFHERFPFEIVKMEIDEKE 386
Query: 185 TRMDILTAIRNATGPRPALFVPE 253
R +I AIRN G R LF P+
Sbjct: 387 MRKEIQYAIRNIHGIRVGLFTPD 409
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 64.5 bits (150), Expect = 4e-11
Identities = 32/91 (35%), Positives = 50/91 (54%)
Frame = +1
Query: 235 GFIRP*GSFELLVKRQIRRLEDPSLRCVELVHEEMQRIVQHCGTEVQQEMLRFPRLHQRI 414
G P +FE + K+QI RL++PSL+CV+LV E+ +++ C M R+PRL +
Sbjct: 404 GLFTPDMAFEAIAKKQITRLKEPSLKCVDLVVNELANVIRQCA----DTMARYPRLRDEL 459
Query: 415 VDVVTQLLRTRLPPTNSMVEKLVGIELAYIN 507
+V +R R + +V ELAY+N
Sbjct: 460 ERIVVSHMREREQIAKQQIGLIVDYELAYMN 490
Score = 54.0 bits (124), Expect = 6e-08
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 KSQTLLQIITKFASAYCSTIEGT-ARNIETTELCGGARICYIFHETFGRTLDSIHPLVGL 184
K++ LLQ++T+F + +IEG+ A+ + T EL GGARI +FHE F + +
Sbjct: 327 KTKALLQMVTQFNADIERSIEGSSAKLVSTNELSGGARINRLFHERFPFEIVKMEIDEKE 386
Query: 185 TRMDILTAIRNATGPRPALFVPE 253
R +I AIRN G R LF P+
Sbjct: 387 MRKEIQYAIRNIHGIRVGLFTPD 409
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 64.5 bits (150), Expect = 4e-11
Identities = 32/91 (35%), Positives = 50/91 (54%)
Frame = +1
Query: 235 GFIRP*GSFELLVKRQIRRLEDPSLRCVELVHEEMQRIVQHCGTEVQQEMLRFPRLHQRI 414
G P +FE + K+QI RL++PSL+CV+LV E+ +++ C M R+PRL +
Sbjct: 404 GLFTPDMAFEAIAKKQITRLKEPSLKCVDLVVNELANVIRQCA----DTMARYPRLRDEL 459
Query: 415 VDVVTQLLRTRLPPTNSMVEKLVGIELAYIN 507
+V +R R + +V ELAY+N
Sbjct: 460 ERIVVSHMREREQIAKQQIGLIVDYELAYMN 490
Score = 54.0 bits (124), Expect = 6e-08
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 KSQTLLQIITKFASAYCSTIEGT-ARNIETTELCGGARICYIFHETFGRTLDSIHPLVGL 184
K++ LLQ++T+F + +IEG+ A+ + T EL GGARI +FHE F + +
Sbjct: 327 KTKALLQMVTQFNADIERSIEGSSAKLVSTNELSGGARINRLFHERFPFEIVKMEIDEKE 386
Query: 185 TRMDILTAIRNATGPRPALFVPE 253
R +I AIRN G R LF P+
Sbjct: 387 MRKEIQYAIRNIHGIRVGLFTPD 409
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 64.5 bits (150), Expect = 4e-11
Identities = 32/91 (35%), Positives = 50/91 (54%)
Frame = +1
Query: 235 GFIRP*GSFELLVKRQIRRLEDPSLRCVELVHEEMQRIVQHCGTEVQQEMLRFPRLHQRI 414
G P +FE + K+QI RL++PSL+CV+LV E+ +++ C M R+PRL +
Sbjct: 404 GLFTPDMAFEAIAKKQITRLKEPSLKCVDLVVNELANVIRQCA----DTMARYPRLRDEL 459
Query: 415 VDVVTQLLRTRLPPTNSMVEKLVGIELAYIN 507
+V +R R + +V ELAY+N
Sbjct: 460 ERIVVSHMREREQIAKQQIGLIVDYELAYMN 490
Score = 54.0 bits (124), Expect = 6e-08
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 KSQTLLQIITKFASAYCSTIEGT-ARNIETTELCGGARICYIFHETFGRTLDSIHPLVGL 184
K++ LLQ++T+F + +IEG+ A+ + T EL GGARI +FHE F + +
Sbjct: 327 KTKALLQMVTQFNADIERSIEGSSAKLVSTNELSGGARINRLFHERFPFEIVKMEIDEKE 386
Query: 185 TRMDILTAIRNATGPRPALFVPE 253
R +I AIRN G R LF P+
Sbjct: 387 MRKEIQYAIRNIHGIRVGLFTPD 409
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical
protein E03A3.6 protein.
Length = 2089
Score = 30.3 bits (65), Expect = 0.86
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 296 KTLRYVVLNWYTKKCRGSFSTVAQKSSRKCYVSHACTNASSTS 424
KT++Y V W T +C+ + + S ++CY C + + TS
Sbjct: 244 KTIQYRVHAWRTVQCQSTGCSDKTASVKRCYDPVICADVADTS 286
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical
protein E03A3.6 protein.
Length = 2089
Score = 30.3 bits (65), Expect = 0.86
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 296 KTLRYVVLNWYTKKCRGSFSTVAQKSSRKCYVSHACTNASSTS 424
KT++Y V W T +C+ + + S ++CY C + + TS
Sbjct: 244 KTIQYRVHAWRTVQCQSTGCSDKTASVKRCYDPVICADVADTS 286
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 30.3 bits (65), Expect = 0.86
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 296 KTLRYVVLNWYTKKCRGSFSTVAQKSSRKCYVSHACTNASSTS 424
KT++Y V W T +C+ + + S ++CY C + + TS
Sbjct: 237 KTIQYRVHAWRTVQCQSTGCSDKTASVKRCYDPVICADVADTS 279
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 323 WYTKKCRGSFSTVAQKSSRKCYVSHACTNASSTSSRSC*GLDCLRP 460
W KC+ S V C V++ C++ + SS + G +C+ P
Sbjct: 1754 WNKHKCKCHKSFVGDTCLPVCSVANVCSSGTCVSSNTTAGYECICP 1799
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 2 SDKSQTLLQIITKFASAYCSTIEGTARNIETTELCGGARICYIFH 136
SD + L + TKF+S + S+ + + ETT+ AR+ ++++
Sbjct: 158 SDPAPVLKALETKFSSTFASSAASASTDAETTKTKEMARVKFVYN 202
>Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical
protein T05A10.3 protein.
Length = 406
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 280 QIRRLEDPSLRCVEL--VHEEMQRIVQHCGTEVQQEMLRFPR 399
+IRRLE+ SLR E+ + EE +RI + E +Q+ + R
Sbjct: 249 EIRRLEEESLRLEEIRRIEEEKKRIEEIRRQEEEQQRIELER 290
>Z83114-9|CAB05553.2| 941|Caenorhabditis elegans Hypothetical
protein K09B11.9a protein.
Length = 941
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +1
Query: 337 MQRIVQHCGTEVQQEMLRFPRLHQRIVDVV 426
+ +++H GTEVQ+ ++ P+ ++VDV+
Sbjct: 206 ISNLLRHRGTEVQKAVMEHPQGIAKLVDVI 235
>Z83114-8|CAJ76944.1| 875|Caenorhabditis elegans Hypothetical
protein K09B11.9b protein.
Length = 875
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +1
Query: 337 MQRIVQHCGTEVQQEMLRFPRLHQRIVDVV 426
+ +++H GTEVQ+ ++ P+ ++VDV+
Sbjct: 140 ISNLLRHRGTEVQKAVMEHPQGIAKLVDVI 169
>AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical
protein Y47D3A.29 protein.
Length = 1428
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 416 TMRWCRRGKRSISCWTSV 363
TM+WCR G I C T V
Sbjct: 1327 TMKWCREGLECIRCSTGV 1344
>AL021483-8|CAI79173.1| 941|Caenorhabditis elegans Hypothetical
protein K09B11.9a protein.
Length = 941
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +1
Query: 337 MQRIVQHCGTEVQQEMLRFPRLHQRIVDVV 426
+ +++H GTEVQ+ ++ P+ ++VDV+
Sbjct: 206 ISNLLRHRGTEVQKAVMEHPQGIAKLVDVI 235
>AF045646-8|AAK29830.1| 541|Caenorhabditis elegans
Udp-glucuronosyltransferase protein52 protein.
Length = 541
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 161 SIHPLVGLTRMDILTAIRNATGPRPALFVPEDLLSFWSSDR-LEDWKTLRYVVLNWYTKK 337
S+ L L R + + N+ A+F EDL ++W R +W + +++N Y +K
Sbjct: 171 SVSSLPILDRQSLAAGMPNSPAVTQAIFEAEDLTTYWGKFRNFLNWAHIT-LIINPYCEK 229
>U23510-5|AAY55872.1| 110|Caenorhabditis elegans Hypothetical
protein R12C12.10 protein.
Length = 110
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/79 (20%), Positives = 31/79 (39%)
Frame = -2
Query: 287 LICRLTRSSKDPQGRIKPV*GL*RCGSRSKCPCGSNLLKDVWSPKCVQKSRGIYNRFWRR 108
++ LT S PQ G C + + CP G + + + G Y ++W+
Sbjct: 13 ILIHLTTSFLQPQPTCN---GCPTCQNVNGCPSGDGAAAEATTESSASTTLGYYEQYWQG 69
Query: 107 HKVQWSQCSGLYLLLSNSK 51
+ + +Y+ N+K
Sbjct: 70 NGWKTDDAGNVYVGDDNAK 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,439,352
Number of Sequences: 27780
Number of extensions: 256556
Number of successful extensions: 831
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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