Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0798
         (723 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    27   0.78 
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    27   0.78 
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    25   2.4  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   5.5  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    24   5.5  
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    24   5.5  

>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 552 SSRELLHKIW**QSEMPRVNKEQRKKEEQSDWAYKVREVQRYCL 683
           S ++L H +   Q    R+ K   ++E  SDW +    V R+CL
Sbjct: 423 SHKDLHHILKELQFITNRMKKADEEQELISDWKFAAMVVDRFCL 466


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 552 SSRELLHKIW**QSEMPRVNKEQRKKEEQSDWAYKVREVQRYCL 683
           S ++L H +   Q    R+ K   ++E  SDW +    V R+CL
Sbjct: 423 SHKDLHHILKELQFITNRMKKADEEQELISDWKFAAMVVDRFCL 466


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 16/61 (26%), Positives = 24/61 (39%)
 Frame = +1

Query: 514 IIVSDGSKDSTVKVAESYSIKYGSDKVKCLELIKNRGKRRSSQTGHTKFERCNDIVCRCR 693
           + V DG     V  +    + YGS  +KC    + R     +QT +    R     C+ R
Sbjct: 342 VAVQDGLFLMAVSNSCMNPLVYGSYAMKCRLPCRRRNTLGGAQTPNAAQRRSTGFRCQQR 401

Query: 694 W 696
           W
Sbjct: 402 W 402


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 473 PRTQLFHPTWVAVFFLHYMQEQL 405
           PRT    P W+   FLHY+   L
Sbjct: 324 PRTHRM-PMWIRSVFLHYLPAML 345


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +3

Query: 603 RVNKEQRKKEEQSDWAYKVREVQRYCL 683
           ++ KE  + +   DW +    V R CL
Sbjct: 483 QIRKEDEESDIAKDWKFAAMVVDRLCL 509


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 510 SYLYEGFSFCRFSKNSI 460
           +YL +GFSF  + K SI
Sbjct: 458 AYLLQGFSFAPYEKTSI 474


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,756
Number of Sequences: 2352
Number of extensions: 12376
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)