Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0797
(627 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 157 9e-40
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 157 1e-39
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 157 1e-39
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 93 3e-20
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 90 3e-19
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 69 6e-13
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.006
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.006
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 34 0.019
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 33 0.034
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 32 0.059
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 32 0.078
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 28 1.3
SPAC821.12 |orb6||serine/threonine protein kinase Orb6|Schizosac... 27 1.7
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 3.9
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 26 5.1
SPAC11D3.06 |||MatE family transporter|Schizosaccharomyces pombe... 26 5.1
SPCC16C4.08c |skb15||Shk1 kinase binding protein 15|Schizosaccha... 26 5.1
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 5.1
SPAC1420.04c |cox1101|cox11, SPAPB17E12.01c, cox11|fusion cytoch... 25 6.8
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 25 6.8
SPAC19B12.13 |cox1102|cox11, cox11-b, cox11, SPAPB8E5.01|fusion ... 25 6.8
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 6.8
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 9.0
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 157 bits (382), Expect = 9e-40
Identities = 74/85 (87%), Positives = 79/85 (92%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
IDIALWKFET KY VT+IDAP HRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+GQ
Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQ 132
Query: 435 TREHALLAFTLGVKQLIVGVNKMDS 509
TREHALLA+TLGVKQLIV VNKMD+
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDT 157
Score = 149 bits (361), Expect = 3e-37
Identities = 68/72 (94%), Positives = 70/72 (97%)
Frame = +1
Query: 40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 219
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 220 DKLKAERERGIT 255
DKLKAERERGIT
Sbjct: 61 DKLKAERERGIT 72
Score = 30.3 bits (65), Expect = 0.24
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 521 YSEPRFEEIKKEVSSYIKKI 580
+S+ RFEEI KE S++IKK+
Sbjct: 160 WSQARFEEIVKETSNFIKKV 179
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 157 bits (381), Expect = 1e-39
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
IDIALWKFET KY VT+IDAP HRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQ
Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQ 132
Query: 435 TREHALLAFTLGVKQLIVGVNKMDS 509
TREHALLA+TLGVKQLIV VNKMD+
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDT 157
Score = 149 bits (361), Expect = 3e-37
Identities = 68/72 (94%), Positives = 70/72 (97%)
Frame = +1
Query: 40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 219
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 220 DKLKAERERGIT 255
DKLKAERERGIT
Sbjct: 61 DKLKAERERGIT 72
Score = 30.3 bits (65), Expect = 0.24
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 521 YSEPRFEEIKKEVSSYIKKI 580
+S+ RFEEI KE S++IKK+
Sbjct: 160 WSQARFEEIVKETSNFIKKV 179
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 157 bits (381), Expect = 1e-39
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
IDIALWKFET KY VT+IDAP HRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQ
Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQ 132
Query: 435 TREHALLAFTLGVKQLIVGVNKMDS 509
TREHALLA+TLGVKQLIV VNKMD+
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDT 157
Score = 149 bits (361), Expect = 3e-37
Identities = 68/72 (94%), Positives = 70/72 (97%)
Frame = +1
Query: 40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 219
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 220 DKLKAERERGIT 255
DKLKAERERGIT
Sbjct: 61 DKLKAERERGIT 72
Score = 30.3 bits (65), Expect = 0.24
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 521 YSEPRFEEIKKEVSSYIKKI 580
+S+ RFEEI KE S++IKK+
Sbjct: 160 WSQARFEEIVKETSNFIKKV 179
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 93.1 bits (221), Expect = 3e-20
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
+++ FET +++DAP H+ ++ NMI G SQAD VL+++A GEFEAG + GQ
Sbjct: 304 VEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQ 363
Query: 435 TREHALLAFTLGVKQLIVGVNKMD 506
TREHA+LA T G+ L+V +NKMD
Sbjct: 364 TREHAVLARTQGINHLVVVINKMD 387
Score = 84.6 bits (200), Expect = 1e-17
Identities = 37/68 (54%), Positives = 50/68 (73%)
Frame = +1
Query: 52 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 231
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 232 AERERGIT 255
ERE+G T
Sbjct: 296 EEREKGKT 303
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 89.8 bits (213), Expect = 3e-19
Identities = 43/87 (49%), Positives = 56/87 (64%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
+D+A FE+ K I DAP HRDFI MI G S AD AVL+V + FE G +NGQ
Sbjct: 243 MDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQ 302
Query: 435 TREHALLAFTLGVKQLIVGVNKMDSLN 515
TREHA L LG+ +++V VNK+D ++
Sbjct: 303 TREHAYLLRALGISEIVVSVNKLDLMS 329
Score = 79.8 bits (188), Expect = 3e-16
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +1
Query: 52 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 231
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 232 AERERGIT 255
ER RG+T
Sbjct: 235 EERARGVT 242
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 68.9 bits (161), Expect = 6e-13
Identities = 34/78 (43%), Positives = 51/78 (65%)
Frame = +3
Query: 273 KFETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 452
++ET+ + +D P H D+IKNMITG + D A+++V+A G+ QTREH L
Sbjct: 110 EYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP-------QTREHLL 162
Query: 453 LAFTLGVKQLIVGVNKMD 506
LA +GVKQ++V +NK+D
Sbjct: 163 LARQVGVKQIVVYINKVD 180
Score = 38.3 bits (85), Expect = 9e-04
Identities = 26/70 (37%), Positives = 35/70 (50%)
Frame = +1
Query: 46 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 225
++K H+NI IGHVD GK+T T I KC ++G+ SF +DK
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQIDK 93
Query: 226 LKAERERGIT 255
E+ RGIT
Sbjct: 94 APEEKARGIT 103
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.006
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 135
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.006
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 135
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 33.9 bits (74), Expect = 0.019
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +1
Query: 64 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 243
NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ ERE
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 244 RGIT 255
+GIT
Sbjct: 111 KGIT 114
Score = 30.3 bits (65), Expect = 0.24
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 276 FETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 446
FE S Y + IID P H DF + D AVL++ A +G I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 33.1 bits (72), Expect = 0.034
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 294 YVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 473
+V+ +D P H + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 474 KQLIVGVNKMD 506
K +I+ NK+D
Sbjct: 163 KHIIILQNKVD 173
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 34 PKMGKEKTHINIVVIGHVDSGKST 105
P + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 32.3 bits (70), Expect = 0.059
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +1
Query: 64 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 243
N+ +I H+D+GK+T T ++Y G F + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGD----TVMDYLPAERQ 76
Query: 244 RGIT 255
RGIT
Sbjct: 77 RGIT 80
Score = 25.8 bits (54), Expect = 5.1
Identities = 25/84 (29%), Positives = 37/84 (44%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
I+ A F + +ID P H DF + + D AV I+ + AG+ Q
Sbjct: 81 INSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-----DGSAGV--EAQ 133
Query: 435 TREHALLAFTLGVKQLIVGVNKMD 506
T+ A G+ ++I VNKMD
Sbjct: 134 TKVVWKQATKRGIPKVIF-VNKMD 156
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 31.9 bits (69), Expect = 0.078
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Frame = -2
Query: 431 TVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISV*RSINDGNIVLASFELPESNI-- 258
+V+ +T T ++ + +SL SC L + + + S + SN
Sbjct: 109 SVMNETDSSSTSVEDVNKENILSLNDSCLIKLSDDEASNKSSRSSTPRNSIKSNSSNQGH 168
Query: 257 -DV-IPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPH 129
D+ IP+ A S+ N++ + +D LP + S V+L +P H
Sbjct: 169 GDIPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 27.9 bits (59), Expect = 1.3
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = +1
Query: 64 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 243
N VI H+D GKST + ++ G I++ + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 244 RGIT 255
RGIT
Sbjct: 104 RGIT 107
>SPAC821.12 |orb6||serine/threonine protein kinase
Orb6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 469
Score = 27.5 bits (58), Expect = 1.7
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -1
Query: 606 ESDSSWVVAIFLMYEDTSFL 547
ESDS WVV+++ ++D+ +L
Sbjct: 147 ESDSPWVVSLYYAFQDSLYL 166
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 26.2 bits (55), Expect = 3.9
Identities = 20/78 (25%), Positives = 32/78 (41%)
Frame = +3
Query: 366 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRK 545
D L V+ G +NGQ EH+L LGV +I + DS + + K
Sbjct: 581 DGGTLYVSTNNGYVLMFNFQNGQVIEHSLRRNQLGVAPII--LKHFDSKEKNAIFALGEK 638
Query: 546 SRRKYPHTSRRLLQPSCC 599
+ Y + + ++ P C
Sbjct: 639 PQLMYYESDKLVITPLSC 656
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 25.8 bits (54), Expect = 5.1
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -2
Query: 314 SINDGNIVLASFELPESNIDVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIP 135
S++ + L S+ P S + A ++YL+ PL S S S + +R SIP
Sbjct: 305 SVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSASRHTALRTSIP 364
>SPAC11D3.06 |||MatE family transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 455
Score = 25.8 bits (54), Expect = 5.1
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 610 ARKRQQLGCSNLLDV*GYFLLDFLKSGLT-VWWFSESILL 494
A K+Q+LG LL G+ +L L + VWW+S+ IL+
Sbjct: 79 AGKKQELGI--LLQT-GFIVLSILYLPICLVWWYSKPILI 115
>SPCC16C4.08c |skb15||Shk1 kinase binding protein
15|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 25.8 bits (54), Expect = 5.1
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 202 KYAWVL-DKLKAERERGITSILLSGSSKLASTM 297
K +W+L LK+ +GIT I + S KLA T+
Sbjct: 106 KGSWLLVHTLKSSSHKGITGIAVHPSEKLALTV 138
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 5.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -3
Query: 247 HAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 149
H+H PL P+P +L P P P S WY
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWY 166
>SPAC1420.04c |cox1101|cox11, SPAPB17E12.01c, cox11|fusion
cytochrome c oxidase assembly protein Cox1101,
mitochondrial ribosomal protein
Rsm22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 753
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 542 EIKKEVSSYIKKIATTQLLSLSCPFLD 622
+IKK ++ K +AT L LS PF D
Sbjct: 104 QIKKFINDIKKDLATESQLPLSAPFKD 130
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 303 IIDAPLHRDFIKNMITGTSQADCAVLIV 386
IID P H F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC19B12.13 |cox1102|cox11, cox11-b, cox11, SPAPB8E5.01|fusion
cytochrome c oxidase assembly protein Cox1102,
mitochondrial ribosomal protein
Rsm2202|Schizosaccharomyces pombe|chr 1|||Manual
Length = 753
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 542 EIKKEVSSYIKKIATTQLLSLSCPFLD 622
+IKK ++ K +AT L LS PF D
Sbjct: 104 QIKKFINDIKKDLATESQLPLSAPFKD 130
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 25.4 bits (53), Expect = 6.8
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -3
Query: 226 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWWT 98
V +PK I I++ F P S S C+Y S D W T
Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 9.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 181 PGPPSRTSRWYVCQYHHIC 125
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,558,080
Number of Sequences: 5004
Number of extensions: 51282
Number of successful extensions: 207
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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