Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0796
         (685 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g56660.1 68414.m06516 expressed protein                             30   1.6  
At4g25770.1 68417.m03709 expressed protein                             29   3.8  
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ...    28   6.6  
At4g09290.1 68417.m01537 hypothetical protein                          28   6.6  
At2g30370.1 68415.m03696 allergen-related weak similarity to pol...    28   6.6  
At5g64070.1 68418.m08046 phosphatidylinositol 4-kinase (PI4K) ne...    27   8.8  
At5g09350.1 68418.m01083 phosphatidylinositol 4-kinase, putative...    27   8.8  
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016...    27   8.8  

>At1g56660.1 68414.m06516 expressed protein
          Length = 522

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = +2

Query: 506 STKRESRQKNNDHRSNKEKTSKQASEEH*K*VNEICHR--RPREDDGCIEKQK 658
           +T++E   +  DH+  K+K +K  +++    ++E+C +  + ++DD    KQK
Sbjct: 309 ATEQEMDDEAADHKEGKKKKNKDKAKKKETVIDEVCEKETKDKDDDEGETKQK 361


>At4g25770.1 68417.m03709 expressed protein
          Length = 418

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 22/73 (30%), Positives = 33/73 (45%)
 Frame = +1

Query: 214 RGLRRNVNQMLRFLWIQLDSEDYNQICDPCIKRLRESCSFRNLVIRSQKQLMDEISNGHE 393
           R L  + NQ    L++Q  ++  N      + RL   C   N   RS+++L  EI NG E
Sbjct: 21  RFLPPSQNQFRFRLYLQFPAQPKNLCQMEWMNRLGIGCFAAN---RSKRELTTEIDNGGE 77

Query: 394 PAIKIEYVNEAEK 432
                + +  AEK
Sbjct: 78  DFFDADVMESAEK 90


>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3
           Pfam PF00400: WD domain, G-beta repeats;
          Length = 1327

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 596 IFNVLRLPVWKFSLCWTGGHYFSVYFL 516
           +  VL +  WK +  +TGGH  S+Y L
Sbjct: 112 VIRVLSMITWKLARRYTGGHKGSIYCL 138


>At4g09290.1 68417.m01537 hypothetical protein
          Length = 376

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +3

Query: 507 QPKEKVDRKIMTTGPTKRKLPNRQAKNIENRLTKYAIGDPEKTMVVSRSK 656
           + KEK D    +   TK +    +A   +NRL   +  D EKTM + R K
Sbjct: 298 EAKEKADGDTSSVPKTKPEEAKEKADAEDNRLLPESDEDEEKTMRLERVK 347


>At2g30370.1 68415.m03696 allergen-related weak similarity to pollen
           major allergen 2 protein [Juniperus ashei]
           gi|9955725|emb|CAC05582
          Length = 230

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/37 (32%), Positives = 26/37 (70%)
 Frame = -3

Query: 188 TINILNNHIPNSICISRSTFSLQFPFFYIIKLQFALC 78
           ++++L++ +P+S+  S +T + +F  FY++ L F LC
Sbjct: 9   SLSLLSSSLPSSLQPSENTRA-KFSLFYLLLLFFVLC 44


>At5g64070.1 68418.m08046 phosphatidylinositol 4-kinase (PI4K) nearly
            identical to gi:4467359
          Length = 1121

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -2

Query: 654  CFSIQPSS--SLGLLWHISLTYFQCSSLACLEVFSLLDRW 541
            CF   P +  +L   +H+SLT  QC SL    + S LD W
Sbjct: 1066 CFKGGPRTIQNLRKRFHLSLTEEQCVSLVLSLISSSLDAW 1105


>At5g09350.1 68418.m01083 phosphatidylinositol 4-kinase, putative
            strong similarity to gi:4467359
          Length = 1116

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -2

Query: 654  CFSIQPSS--SLGLLWHISLTYFQCSSLACLEVFSLLDRW 541
            CF   P +  +L   +H+SLT  QC SL    + S LD W
Sbjct: 1061 CFKGGPRTIQNLRKRFHLSLTEEQCVSLVLSLISSSLDAW 1100


>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
           reticulocyte binding protein; similar to  Myosin heavy
           chain, non-muscle (Zipper protein) (Myosin II)
           (SP:Q99323) {Drosophila melanogaster} similar to EST
           gb|T76116
          Length = 1730

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -2

Query: 576 ACLEVFSLLDRWSLFFCLLSLLVDINRNI*E 484
           AC E+F L  + + FF  LS L D NRN  E
Sbjct: 258 ACSELFELKQKEAAFFERLSHLEDENRNFVE 288


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,971,168
Number of Sequences: 28952
Number of extensions: 314499
Number of successful extensions: 831
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1447936096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)