Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0791
(605 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 2e-20
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 5e-12
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 47 1e-05
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 45 5e-05
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 40 0.002
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.002
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 39 0.003
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 37 0.015
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.019
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 34 0.078
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 31 0.55
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.72
SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.96
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 1.7
SB_23424| Best HMM Match : Ank (HMM E-Value=1.1e-16) 30 1.7
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.2
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.2
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 2.2
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 29 2.9
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.9
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 29 2.9
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 29 2.9
SB_53793| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 28 5.1
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 28 5.1
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 28 5.1
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 6.7
SB_49314| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-30) 27 8.9
SB_27857| Best HMM Match : Cadherin (HMM E-Value=0) 27 8.9
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 27 8.9
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 27 8.9
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 95.9 bits (228), Expect = 2e-20
Identities = 48/82 (58%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 AAVSKTAVAPI*SVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 433
A +SKTA API VKLL+Q Q + K D YKG++D R + +G LSFWRGN AN
Sbjct: 20 AIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGNLAN 79
Query: 434 VIRYFPTQALNFAFKDKYKQVF 499
IRYFPTQALNFAFKD+ K +F
Sbjct: 80 CIRYFPTQALNFAFKDQVKALF 101
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +2
Query: 350 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 502
+YKG +D ++I K++G +S +G AN++R + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/78 (41%), Positives = 54/78 (69%)
Frame = +2
Query: 260 AVSKTAVAPI*SVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 439
AVS+T+V+P+ VK+LLQ+Q + ++KG++ ++I KE+G+L +++GN NVI
Sbjct: 46 AVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVI 99
Query: 440 RYFPTQALNFAFKDKYKQ 493
R FP A+ FA ++YK+
Sbjct: 100 RIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 56.8 bits (131), Expect = 1e-08
Identities = 38/98 (38%), Positives = 56/98 (57%)
Frame = +2
Query: 257 AAVSKTAVAPI*SVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 436
A VS+TA AP+ +K+LLQVQ A+ GIV F + +E G+ S WRGN ANV
Sbjct: 147 AGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGNGANV 200
Query: 437 IRYFPTQALNFAFKDKYKQVFLGGLTRRRSSGVTSLVI 550
I+ P + F +K K++ +G T ++ GVT ++
Sbjct: 201 IKIAPESGIKFFAYEKAKKL-VGSDT--KALGVTDRLL 235
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +2
Query: 308 LQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY 487
L+V I +Y+G++ A I +++G+ SF+RG F +++ P ++ A +
Sbjct: 251 LEVLKTRLAIRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGIDLAVYETL 310
Query: 488 KQVFL 502
K +L
Sbjct: 311 KNFYL 315
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +2
Query: 257 AAVSKTAVAPI*SVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 418
A +SKTA API VKLL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 21 AIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 308 LQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 472
L+V V Q+ + G++ F + K +G+ +FW+GN + IR FP A+ +A
Sbjct: 79 LEVVKVLAQVGTQEAKPGLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYA 133
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +2
Query: 263 VSKTAVAPI*SVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 442
++ V P +K L VQHV+K A YKG+ A I +E+G+L+ ++G + +
Sbjct: 165 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPSFLG 221
Query: 443 YFP 451
FP
Sbjct: 222 LFP 224
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +2
Query: 350 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 493
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +2
Query: 260 AVSKTAVAPI*SVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 439
A TAV PI VK +Q Q + A++ YK +D F ++ + +G + +RG ++
Sbjct: 925 ATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLL 982
Query: 440 RYFPTQALNFAFKDKYKQVF 499
P +A+ D + +F
Sbjct: 983 GVSPEKAIKLTTNDFVRGIF 1002
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +2
Query: 278 VAPI*SVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 457
+AP+ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++GN +R P
Sbjct: 51 IAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGF 109
Query: 458 ALNF 469
A+ F
Sbjct: 110 AVYF 113
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +2
Query: 350 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 469
RYKG++D ++ KE+G++ F RG + ++R F Q L F
Sbjct: 170 RYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +2
Query: 335 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 499
I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 353 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 502
Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLL 84
Score = 34.7 bits (76), Expect = 0.059
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +2
Query: 353 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV---FLGG 508
YKG +D RI + +G+ + W+G R P L F F ++ + F GG
Sbjct: 133 YKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPHTVLTFIFLEQLNRAANYFYGG 187
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +2
Query: 362 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 496
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.034
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 365 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 490
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 34.3 bits (75), Expect = 0.078
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 263 VSKTAVAPI*SVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 421
++ V P +K L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 434 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 496
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2
Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGLTRRRSSG 532
+P+E +L W G ++VI F A+N F+D+YK++ L R R SG
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL----LRRMRRSG 184
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 263 VSKTAVAPI*SVKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 421
+SK + P +K +QVQ + Q+Y G+ D F I KE+G + ++G
Sbjct: 42 ISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 31.5 bits (68), Expect = 0.55
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGLTRRRSSGV 535
+P+E L + G ++VI F A+N F+++YK+VF R R+S V
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVFRIATFRGRNSAV 313
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 31.1 bits (67), Expect = 0.72
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +2
Query: 239 PGWRYPAAVSKTAVA-----PI*SVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 403
P WR+ + + VA P+ V+ L VQ +S + ++ Y GIV A RI E+G+
Sbjct: 28 PLWRFVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGI 85
Query: 404 LSFWRGNFANVIRYFP 451
++G +++ P
Sbjct: 86 RGLYKGLVPSLVSIAP 101
>SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 30.7 bits (66), Expect = 0.96
Identities = 23/61 (37%), Positives = 29/61 (47%)
Frame = +1
Query: 190 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTHIECQAAAPSTARQQADRRRPALQGYRR 369
RT+ R + R R + V+ RR DRR T A T R+Q DRRR + RR
Sbjct: 100 RTRARVTIRRQVDRRRTRARVTSRRQVDRRRTR------AQVTRRRQVDRRRTRARVTRR 153
Query: 370 R 372
R
Sbjct: 154 R 154
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Frame = +1
Query: 190 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTHIEC---------QAAAPSTARQQADRR 342
RT+ R + R R + V+ RR DRR T + A T+R+Q DRR
Sbjct: 70 RTRARVTSRRQVDRRRTRARVTSRRQVDRRRTRARVTIRRQVDRRRTRARVTSRRQVDRR 129
Query: 343 RPALQGYRRR 372
R Q RRR
Sbjct: 130 RTRAQVTRRR 139
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +1
Query: 190 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTHIECQAAAPSTARQQADRRR 345
RT+ R + R R + V+ RR DRR T A T+R+Q DRRR
Sbjct: 55 RTRARVTSRRQVDRRRTRARVTSRRQVDRRRTR------ARVTSRRQVDRRR 100
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +1
Query: 190 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTHIECQAAAPSTARQQADRRRPALQGYRR 369
RT+ + + R R + V+ RR DRR T A T+R+Q DRRR + R
Sbjct: 40 RTRAQVTSRRQVDQRRTRARVTSRRQVDRRRTR------ARVTSRRQVDRRRTRARVTSR 93
Query: 370 R 372
R
Sbjct: 94 R 94
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 30.7 bits (66), Expect = 0.96
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +2
Query: 284 PI*SVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 460
P+ VK Q + +Y G D +I G+ +F +G A ++R FPT A
Sbjct: 377 PVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +2
Query: 359 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 496
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_23424| Best HMM Match : Ank (HMM E-Value=1.1e-16)
Length = 494
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 232 RTSWLAVSRRRLQDRRSTHIECQAAAPSTARQQADRRRPAL 354
+T+ +AV L RRS + +A P+T R+ + RP L
Sbjct: 337 KTAKIAVKTNNLLRRRSVAVTAPSAKPNTTRRMSTASRPTL 377
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 305 LLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 421
L++++ + +I YK + AF +I K++G L W G
Sbjct: 137 LVKIRFQAVKIGETIPYKNMFHAFYKIAKKEGFLGLWTG 175
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 304 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 405
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 304 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 405
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +2
Query: 284 PI*SVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 463
P+ +K+ LQ + K +KG +D F++ + +GL ++G + ++ P+ AL
Sbjct: 40 PLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYKGMLSPLLMATPSTAL 98
Query: 464 NF 469
F
Sbjct: 99 TF 100
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 304 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 405
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 304 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 405
A+ S RQQ R RP GY +R R +P+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 353 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF--LGG 508
Y+G++ + KE+G+ +F+R + P Q L+F + ++ LGG
Sbjct: 32 YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGG 85
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +2
Query: 266 SKTAVAPI*SVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 445
+ AV P+ +K LQ+ + + + Y GI+D +I +GL +F++G +I
Sbjct: 219 ASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMIVI 275
Query: 446 FP 451
P
Sbjct: 276 AP 277
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGLTRRRSSG 532
+P+E +L + G ++VI F A+N FK++YK++ T R G
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKILRPRCTGRIVEG 316
>SB_53793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -3
Query: 552 QITSEVTPELRLLVKPPRNTCLYLSLKA 469
Q+T V E RLL KP R+ C YLS A
Sbjct: 133 QVTGIVDAEARLL-KPGRSECFYLSFSA 159
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 386 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 502
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 28.3 bits (60), Expect = 5.1
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Frame = +1
Query: 178 RSHNRTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTHIEC-QAAAPSTARQQADR--RRP 348
RSH RT C R+RS+ W+ V R Q + +I+ Q A A+ A R RRP
Sbjct: 3308 RSHRRTVC-----RARSI--GWIKVRRAISQGKFREYIKSEQTQAIKMAKFVARRSNRRP 3360
Query: 349 ALQ----GYRRRLRAHPQGAGSPFILAW*LRQR 435
+ G+R+ RA QG ++ + +RQR
Sbjct: 3361 VCKARSVGWRKVRRAIDQGNFREYMRSEHIRQR 3393
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 304 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 405
A+ S RQQ R RP +GY +R R +P+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 253 IPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTR*WGI 125
+PP R +A + + FD+ + I TR RGG ++ WG+
Sbjct: 540 LPPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 581
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 32 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 175
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
>SB_49314| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-30)
Length = 300
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 45 HTPTLCAPVITKLLQISCSKIRS*CFVIPHQRVPQLPPRHIHLVKIT 185
H C PV+ L K + ++ H+RV PPR +H++ +T
Sbjct: 256 HVNACCNPVVYSLHNPKLRKCMN--RLVHHKRVRTSPPRAVHVLAMT 300
>SB_27857| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2418
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2
Query: 80 ITPN----LLFKNQELVFRDPPSACAATPTSTYSPSEDHII 190
+TPN LL + + R+P SA S YSPSE I+
Sbjct: 963 LTPNVRYQLLIRASDSATRNPSSAQVPVYVSVYSPSESPIV 1003
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +2
Query: 284 PI*SVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 463
P+ ++K+ LQ + K YK D F +I + +G+ +RG ++ P +
Sbjct: 58 PLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYYLFRGVTVPILNSIPNTTV 116
Query: 464 NFA 472
F+
Sbjct: 117 LFS 119
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 253 IPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTR*WGI 125
+PP R +A + FD+ + I TR RGG ++ WG+
Sbjct: 1267 LPPDRTEVAPPFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 1308
>SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 1170
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 59 LCSRDYEITPNLLFKN---QELVFRDPPSACAATPTSTYSPSED 181
LC +D E++P LLF N +++ R P A P++ S ED
Sbjct: 54 LCGKDQEVSPKLLFGNDLAKQVRDRKKPPVW-ANPSAPQSAKED 96
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,749,650
Number of Sequences: 59808
Number of extensions: 381897
Number of successful extensions: 1115
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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