Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0789
         (446 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   3.0  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   4.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   5.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    20   9.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   9.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   9.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   9.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   9.3  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 139 PVRIQGAHTYGPGQ*CSRFYVQELEAALLRD 231
           PVRI G H  G    C++      E AL  D
Sbjct: 196 PVRIMGVHRPGFDNDCNKNTSTSKEIALNND 226


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 125 HPAPSHSSLNTPTL 84
           HPA +HS+L +P +
Sbjct: 121 HPAAAHSALLSPAM 134


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +2

Query: 176 VNDVHVSMSKNSRQPYCVTSEAGQQTXPNHGVPDVL 283
           + ++ V + +   + YC+    GQ    N  V DVL
Sbjct: 322 LGNLSVCIDQQPWRSYCIQPPCGQLNPINPNVFDVL 357


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 316 YHHHGHAEFGQQHV 275
           +HH GH    Q HV
Sbjct: 323 HHHAGHHIHAQHHV 336


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 6/11 (54%), Positives = 6/11 (54%)
 Frame = -2

Query: 337 HLDWTYGYHHH 305
           H DW YG   H
Sbjct: 98  HCDWLYGIFGH 108


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = +3

Query: 168 WTWSMMFTFLCPR 206
           W W ++F F  P+
Sbjct: 131 WMWCLIFAFWVPQ 143


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = +3

Query: 168 WTWSMMFTFLCPR 206
           W W ++F F  P+
Sbjct: 131 WMWCLIFAFWVPQ 143


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = +3

Query: 168 WTWSMMFTFLCPR 206
           W W ++F F  P+
Sbjct: 131 WMWCLIFAFWVPQ 143


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = +3

Query: 168 WTWSMMFTFLCPR 206
           W W ++F F  P+
Sbjct: 131 WMWCLIFAFWVPQ 143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,112
Number of Sequences: 336
Number of extensions: 2183
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)