Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0789
(446 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0578 + 4295386-4296489,4297394-4297507 88 3e-18
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 88 3e-18
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 33 0.079
10_02_0199 + 6668902-6669293,6669825-6669882 33 0.10
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 33 0.14
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 31 0.56
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 30 0.74
08_02_0105 + 12448808-12449152,12449218-12449409,12449520-124496... 30 0.97
05_05_0237 - 23526613-23527178,23527979-23528066,23528384-235285... 29 1.3
03_01_0147 - 1170481-1171260,1171332-1171511 28 3.0
06_03_1089 - 27521291-27522124 28 3.9
07_01_0354 + 2578676-2578753,2578871-2578951,2579070-2579312 27 5.2
05_06_0214 - 26425100-26425922,26426008-26426058,26426183-264262... 27 5.2
11_01_0074 + 582210-582434,582521-582712,582785-582950,584013-58... 27 6.9
11_06_0195 - 21138029-21138389,21139796-21140052 27 9.1
10_08_1034 + 22461397-22461702,22462311-22462524,22464936-224649... 27 9.1
09_06_0153 - 21243108-21245660 27 9.1
03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956 27 9.1
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 88.2 bits (209), Expect = 3e-18
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = +1
Query: 259 ESWGTGRAVARIPRVRGGGTHRSSQGAFGNMCRGGRMYAPTK 384
ESWGTGRAV+RIPRV GGGTHR+ QGAFGNMCRGGRM+APTK
Sbjct: 69 ESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTK 110
Score = 50.4 bits (115), Expect = 6e-07
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Frame = +2
Query: 77 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRMDLVNDVHVSMSKNSRQPYCVTSEAGQQ 250
RPLVSV + + + T ++ L VF+AP+R D+V VH +S N RQPY V+ AG Q
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
Query: 251 T 253
T
Sbjct: 66 T 66
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 88.2 bits (209), Expect = 3e-18
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = +1
Query: 259 ESWGTGRAVARIPRVRGGGTHRSSQGAFGNMCRGGRMYAPTK 384
ESWGTGRAV+RIPRV GGGTHR+ QGAFGNMCRGGRM+APTK
Sbjct: 68 ESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTK 109
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 68 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRMDLVNDVHVSMSKNSRQPYCVTSEAG 244
+ ARPLVSV + E A +P V +APIR D+V H +S N RQPY V+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 245 QQT 253
QT
Sbjct: 63 HQT 65
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 33.5 bits (73), Expect = 0.079
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +1
Query: 40 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTYGPGQ*CSRF 195
ASL N + P+F V G SQA V + GAHT G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 33.1 bits (72), Expect = 0.10
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 259 ESWGTGRAVARIPRVRGGGTHRSSQGAFGNMCRGGR 366
+SW TGRA A + R R GG R A N G R
Sbjct: 37 QSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 32.7 bits (71), Expect = 0.14
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 40 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTYGPGQ*CSRF 195
ASL N I +PTF +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 30.7 bits (66), Expect = 0.56
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 362 PPRHMLPKAP*LDLWVPPP 306
PPRH++P+ P WVPPP
Sbjct: 308 PPRHLVPRGP-APPWVPPP 325
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 30.3 bits (65), Expect = 0.74
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 40 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTYGPGQ*CSRF 195
ASL N I +PT +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>08_02_0105 +
12448808-12449152,12449218-12449409,12449520-12449685,
12449771-12450201
Length = 377
Score = 29.9 bits (64), Expect = 0.97
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 40 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTYGPGQ*CSRF 195
ASL+ N ++ +PT V ++ G S V + GAHT G + C+ F
Sbjct: 197 ASLQGANTNLPAPTSGVATLVQKFRNVGLSAKDMVALSGAHTIGKAR-CTTF 247
>05_05_0237 -
23526613-23527178,23527979-23528066,23528384-23528527,
23528674-23528790,23528860-23528970,23530911-23531062,
23531362-23531450,23531664-23531761
Length = 454
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +2
Query: 107 SETVQGAAKPLPFVFKAPIRMDLVNDVHVSMSKNSRQPYCVTSEAGQQTXPNHGVPDVLL 286
+E +Q K PF+ PI L+N + +S RQP E Q PN P ++
Sbjct: 37 AELLQEHQKLGPFMQVLPICSRLLNQEIMRVSGMFRQPGVGDFERSQPASPNQMHPSHIV 96
Query: 287 PEF 295
P F
Sbjct: 97 PNF 99
>03_01_0147 - 1170481-1171260,1171332-1171511
Length = 319
Score = 28.3 bits (60), Expect = 3.0
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 34 GIASLK*R-NESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTYGPGQ*CSRF 195
G ASL+ ++I +PTF++ + G +Q V + GAHT G C+ F
Sbjct: 139 GTASLEPEVADNIPAPTFTLDQLTQSFAAKGLTQEEMVTLSGAHTVGRAH-CTSF 192
>06_03_1089 - 27521291-27522124
Length = 277
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 344 PKAP*LDLWVPPPRTRGIRATARPVPHDSXWFVDQPH 234
P +P PPP A RP+P + +F+ PH
Sbjct: 172 PASPAASPTPPPPPPTERSADVRPMPPEGHFFIPHPH 208
>07_01_0354 + 2578676-2578753,2578871-2578951,2579070-2579312
Length = 133
Score = 27.5 bits (58), Expect = 5.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 250 LLTSLTGHAVGLPRVLGHRNVNIIDQV 170
L GH +G+ VLG +N+ ++DQ+
Sbjct: 105 LACGAVGHIMGVGVVLGLKNIGVLDQI 131
>05_06_0214 -
26425100-26425922,26426008-26426058,26426183-26426256,
26426344-26426441,26426547-26426671,26426724-26426957,
26426992-26427037,26427101-26427152,26427331-26427367,
26427521-26427637,26428287-26428352,26428439-26428518,
26429102-26429311,26429650-26429739,26430093-26430182,
26430280-26430411,26430876-26431094,26431203-26431286,
26431543-26431656,26431857-26431914,26432535-26432602,
26432847-26432962,26433495-26433574,26433839-26433912
Length = 1045
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 149 IRTGGAWLHPAPSHSSLN-TPTLKVGLPIDSF 57
+R+ WL P P+H ++N L + +P+D F
Sbjct: 865 LRSYITWLKPTPAHVAMNPAEALAMQIPVDHF 896
>11_01_0074 +
582210-582434,582521-582712,582785-582950,584013-584404
Length = 324
Score = 27.1 bits (57), Expect = 6.9
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 40 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTYGPGQ*CSRF 195
ASL N +I PT + G SQ V + G+HT G + C+ F
Sbjct: 157 ASLSGANNNIPPPTSGLANLTSLFAAQGLSQKDMVALSGSHTIGQAR-CTNF 207
>11_06_0195 - 21138029-21138389,21139796-21140052
Length = 205
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/18 (61%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
Frame = -2
Query: 322 YGYHHHGHAE-FGQQHVR 272
+G HHHGH F QQH R
Sbjct: 26 FGEHHHGHYNYFHQQHHR 43
>10_08_1034 +
22461397-22461702,22462311-22462524,22464936-22464997,
22465035-22465381,22465495-22465591
Length = 341
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 325 TYGYHHHGHAEFGQQHVRYPMIR 257
TY +HHH E QQH R + R
Sbjct: 42 TYPHHHHHPEEEYQQHPRLKLFR 64
>09_06_0153 - 21243108-21245660
Length = 850
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 126 APCTVSLFSEYTDTKGRATDRLISLL*RSYTSEIYTNSGD 7
APCTV +F++ +G A+ RL + + S + N GD
Sbjct: 612 APCTVGVFADRPFWRGGASFRLPTKISTSEETTAARNQGD 651
>03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956
Length = 397
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 7/29 (24%)
Frame = -2
Query: 343 RRHLDWT-YG------YHHHGHAEFGQQH 278
R HL W YG YHHH H + GQ H
Sbjct: 317 RMHLYWPPYGHGYTSYYHHHHHHQGGQAH 345
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,979,888
Number of Sequences: 37544
Number of extensions: 288941
Number of successful extensions: 911
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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