Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0787
(720 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC336.10c |tif512||translation initiation factor|Schizosacchar... 131 1e-31
SPAC26H5.10c |tif51||translation initiation factor eIF5A|Schizos... 131 1e-31
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 31 0.22
SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin Nup132|Schizosa... 27 2.0
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 27 2.0
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 27 3.6
SPCC825.04c |||N-acetyltransferase |Schizosaccharomyces pombe|ch... 27 3.6
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 26 4.7
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 25 8.2
>SPBC336.10c |tif512||translation initiation
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 157
Score = 131 bits (316), Expect = 1e-31
Identities = 57/77 (74%), Positives = 67/77 (87%)
Frame = +1
Query: 25 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 204
M + E FE G++GAS TFPMQCSALRKNG V++KGRPCKIV+MSTSKTGKHGHAKVH+
Sbjct: 1 MAEEEHVDFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHI 60
Query: 205 VGIDIFNGKKYEDICPS 255
V +DIFNG+KYED+ PS
Sbjct: 61 VALDIFNGRKYEDMSPS 77
Score = 88.6 bits (210), Expect = 8e-19
Identities = 37/76 (48%), Positives = 57/76 (75%)
Frame = +3
Query: 255 THNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELL 434
THNMDVP VKR++YQL +I DDGYL LM +G ++D+++P+G+LG ++ F+ GK+L+
Sbjct: 78 THNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGELGNEIEEGFEEGKDLI 136
Query: 435 CTVLKSCGEECVIAVK 482
TV+ + GEE +A +
Sbjct: 137 ITVVSAMGEEIALACR 152
>SPAC26H5.10c |tif51||translation initiation factor
eIF5A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 131 bits (316), Expect = 1e-31
Identities = 57/77 (74%), Positives = 67/77 (87%)
Frame = +1
Query: 25 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 204
M + E FE G++GAS TFPMQCSALRKNG V++KGRPCKIV+MSTSKTGKHGHAKVH+
Sbjct: 1 MAEEEHVDFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHI 60
Query: 205 VGIDIFNGKKYEDICPS 255
V +DIFNG+KYED+ PS
Sbjct: 61 VALDIFNGRKYEDMSPS 77
Score = 89.0 bits (211), Expect = 6e-19
Identities = 37/76 (48%), Positives = 57/76 (75%)
Frame = +3
Query: 255 THNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELL 434
THNMDVP VKR++YQL +I DDGYL LM +G ++D+++P+G+LG ++ FD G++L+
Sbjct: 78 THNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGELGNEIEEGFDEGRDLI 136
Query: 435 CTVLKSCGEECVIAVK 482
TV+ + GEE +A +
Sbjct: 137 ITVVSAMGEETALACR 152
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 30.7 bits (66), Expect = 0.22
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + +LTA+ S+P S+V N+S P++ S V P + S ++ SS
Sbjct: 2561 VVNSSTPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSS 2613
Score = 29.1 bits (62), Expect = 0.67
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSSRRSPLSA 338
VV S + + T + S+P STV N+S P++ S + P + S +L SS S+
Sbjct: 1181 VVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSS 1240
Query: 337 I 335
I
Sbjct: 1241 I 1241
Score = 29.1 bits (62), Expect = 0.67
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 1361 VVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 1413
Score = 29.1 bits (62), Expect = 0.67
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1721 VVNTSTPITSSTVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1773
Score = 29.1 bits (62), Expect = 0.67
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2201 VVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2253
Score = 28.7 bits (61), Expect = 0.88
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + T + S+P STV N S P++ S V + P + S +L SS
Sbjct: 1349 VVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 1401
Score = 28.7 bits (61), Expect = 0.88
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1493 VVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSS 1545
Score = 28.7 bits (61), Expect = 0.88
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + T + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2189 VVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2241
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
V+ S + + T + S+P STV N+S P++ S V P + S +L SS
Sbjct: 1409 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSSVLNSS 1461
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1661 VVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1713
Score = 27.9 bits (59), Expect = 1.5
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + T + S+P STV N S P++ S V P + S ++ SS
Sbjct: 1157 VVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSS 1209
Score = 27.9 bits (59), Expect = 1.5
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + T + S+P STV N S P++ S V P + S ++ SS
Sbjct: 1469 VVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSS 1521
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + TA+ S+P STV N+S P++ S + + + S IL SS
Sbjct: 3413 VVNSSTPITSSTALNTSTPITSSTVVNSSTPITSSSVLNSSTAIASSSILNSS 3465
Score = 27.5 bits (58), Expect = 2.0
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
V+ S + + + + S+P STV N S P++ S V + P + S +L SS
Sbjct: 809 VLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSSVLNSS 861
Score = 27.5 bits (58), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
V+ S + + T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2489 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2541
Score = 27.5 bits (58), Expect = 2.0
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + + + S+P STV N S P++ S + P + S +L SS
Sbjct: 2741 VVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTPITSSSVLNSS 2793
Score = 27.5 bits (58), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
V+ S + + T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2789 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2841
Score = 27.1 bits (57), Expect = 2.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
V+ S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 473 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 525
Score = 27.1 bits (57), Expect = 2.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
V+ S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 881 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 933
Score = 27.1 bits (57), Expect = 2.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
V+ S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1037 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1089
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 499 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
S + + + + S+P STV N+S P++ S + +P + S +L SS
Sbjct: 1245 STPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSIPITSSSVLNSS 1293
Score = 27.1 bits (57), Expect = 2.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
V+ S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1817 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1869
Score = 27.1 bits (57), Expect = 2.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
V+ S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2009 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2061
Score = 27.1 bits (57), Expect = 2.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
V+ S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2585 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2637
Score = 27.1 bits (57), Expect = 2.7
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + TA+ S+P STV N+S P++ S + + P + S L +S
Sbjct: 3029 VVNSSTPITSSTALNTSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTS 3081
Score = 26.6 bits (56), Expect = 3.6
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSK-SVRN-CVPRSPSGILRSS 359
VV S + + + + S+P STV N S P+++ SV N P + S +L SS
Sbjct: 557 VVNTSTPITSSSVLNSSTPITSSTVVNTSTPITRYSVLNSSTPITSSTVLNSS 609
Score = 26.6 bits (56), Expect = 3.6
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + T + S+P STV N S P++ S V + P + S L +S
Sbjct: 2261 VVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTS 2313
Score = 26.2 bits (55), Expect = 4.7
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + T + S+P STV N+S P++ S + + P + S ++ +S
Sbjct: 1373 VVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 1425
Score = 26.2 bits (55), Expect = 4.7
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
V+ S + + T + S+P STV N S P++ S V P + S ++ SS
Sbjct: 2177 VLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSS 2229
Score = 26.2 bits (55), Expect = 4.7
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + T + S+P STV N+S P++ S + + P + S ++ +S
Sbjct: 2213 VVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 2265
Score = 26.2 bits (55), Expect = 4.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
V+ S + + T + S+P STV N+S P++ S V P + S ++ SS
Sbjct: 2249 VLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSS 2301
Score = 26.2 bits (55), Expect = 4.7
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 499 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
S + + + + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2481 STPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2529
Score = 26.2 bits (55), Expect = 4.7
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + T + S+P STV N+S P++ S + + P + S ++ +S
Sbjct: 2501 VVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 2553
Score = 26.2 bits (55), Expect = 4.7
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 499 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
S + + + + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2781 STPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2829
Score = 26.2 bits (55), Expect = 4.7
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -3
Query: 499 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSSRRSPLSAI 335
S + + + + S+P STV N+S P++ S + P + S +L SS S+I
Sbjct: 3129 STPITSSSILNSSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSSI 3185
Score = 26.2 bits (55), Expect = 4.7
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 499 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
S V + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 3357 STPVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 3405
Score = 25.8 bits (54), Expect = 6.2
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
V+ S + + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 413 VLNSSTPITSSSILNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 465
Score = 25.8 bits (54), Expect = 6.2
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 499 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
S + + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 945 STPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 993
Score = 25.8 bits (54), Expect = 6.2
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
V+ S + + + + S+P STV N S P++ S + P + S +L SS
Sbjct: 1097 VLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTPITSSSVLNSS 1149
Score = 25.8 bits (54), Expect = 6.2
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + + + S+P STV N+S P++ S V P + S ++ +S
Sbjct: 1325 VVNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTS 1377
Score = 25.8 bits (54), Expect = 6.2
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + T + S+P STV N S P++ S + + P + S ++ +S
Sbjct: 1421 VVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTS 1473
Score = 25.8 bits (54), Expect = 6.2
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + + + S+P STV N S P++ S V + P + S ++ +S
Sbjct: 1445 VVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTS 1497
Score = 25.8 bits (54), Expect = 6.2
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 499 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
S + + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1881 STPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 1929
Score = 25.8 bits (54), Expect = 6.2
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 499 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
S + + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2073 STPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 2121
Score = 25.8 bits (54), Expect = 6.2
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + T + S+P STV N+S P++ S + + P + S L +S
Sbjct: 2801 VVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTS 2853
Score = 25.4 bits (53), Expect = 8.2
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + + + S+P STV N S P++ S V + P + S L +S
Sbjct: 2669 VVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTS 2721
Score = 25.4 bits (53), Expect = 8.2
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + + + S+P STV N S P++ S V + P + S L +S
Sbjct: 2897 VVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTS 2949
Score = 25.4 bits (53), Expect = 8.2
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + + + S+P STV N S P++ S V + P + S L +S
Sbjct: 2993 VVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTS 3045
Score = 25.4 bits (53), Expect = 8.2
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 511 VVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 359
VV S + + + + S+P STV N S P++ S V + P + S L +S
Sbjct: 3257 VVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTS 3309
>SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin
Nup132|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1162
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = -2
Query: 368 EVLTQVTVVSHQGQVAIIRDISQLVVFALHVRYVHVVCEGQISSYFLPLKISIPTK*T 195
+V+ +V GQV ++ + + F+L+ R + EG+++ Y+L L++ + T+ T
Sbjct: 978 QVMQRVVKKFIAGQVVEATELLEYLSFSLYRR--EDLVEGEVTDYYLALRLLLTTRLT 1033
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 85 PMQCSALRKNGFVMLKGRPCKIVEMSTSKTGK-HGHAKVHLVGIDIFNGKKYEDICPSHT 261
P +CS ++ ++ C V G+ H H++G+D+ NG Y C +
Sbjct: 35 PRRCSTCKRINKRSIRCLSCHSVGCLWGHHGEEHAMEHTHMIGVDVKNGHTYCFGCQDYV 94
Query: 262 TWTYL 276
T L
Sbjct: 95 YQTEL 99
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 26.6 bits (56), Expect = 3.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 261 NMDVPHVKREDYQLTDISDDGYL 329
NM +P+++ E Q+ D + D YL
Sbjct: 968 NMSIPYIRGEYVQMIDANQDNYL 990
>SPCC825.04c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 204
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 117 FRYAEGSSMQDC*NVHIQNRKARPR*SSLGWD 212
+ + E +Q C N+ +N +A R SS GWD
Sbjct: 41 YHHLEKGLLQQCFNLVKKNMEALYRQSSFGWD 72
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 26.2 bits (55), Expect = 4.7
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +2
Query: 170 KPESTATLKFTWLG--LISSMVKSMKISVPHTQHGRTSREARRLP 298
KP T W G LI S+ +S H QHG T +R+ P
Sbjct: 927 KPTWNGTNLQKWDGDHLIVQYWSSIALSTAHVQHGDTLNYSRQFP 971
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 25.4 bits (53), Expect = 8.2
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 279 VKREDYQLTDISDDGYL 329
+KREDY+LT ++ GYL
Sbjct: 91 IKREDYELTLCANCGYL 107
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,967,233
Number of Sequences: 5004
Number of extensions: 60580
Number of successful extensions: 290
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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