Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0787
         (720 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic t...   148   9e-36
AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p pro...   146   3e-35
AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic i...   146   3e-35
AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB...   146   3e-35
AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA...   146   3e-35
AY121665-1|AAM51992.1|  709|Drosophila melanogaster RE10861p pro...    31   2.1  
AE014296-2303|AAF49800.1|  709|Drosophila melanogaster CG10710-P...    31   2.1  

>AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic
           translation initiationfactor 5a protein.
          Length = 159

 Score =  148 bits (358), Expect = 9e-36
 Identities = 66/83 (79%), Positives = 75/83 (90%)
 Frame = +3

Query: 255 THNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELL 434
           THNMDVP+VKRED QL  ISDD +LTLM D+GDLREDLK+P+G+LG QLR DFDSGK+LL
Sbjct: 77  THNMDVPNVKREDLQLIAISDDSFLTLMTDSGDLREDLKVPEGELGEQLRLDFDSGKDLL 136

Query: 435 CTVLKSCGEECVIAVKANTALDK 503
           CTVLK+CGEECVIA+K NTALDK
Sbjct: 137 CTVLKACGEECVIAIKTNTALDK 159



 Score =  144 bits (350), Expect = 8e-35
 Identities = 65/77 (84%), Positives = 71/77 (92%)
 Frame = +1

Query: 25  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 204
           M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 205 VGIDIFNGKKYEDICPS 255
           VGIDIF+ KKYEDICPS
Sbjct: 60  VGIDIFSNKKYEDICPS 76


>AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p
           protein.
          Length = 159

 Score =  146 bits (354), Expect = 3e-35
 Identities = 65/83 (78%), Positives = 75/83 (90%)
 Frame = +3

Query: 255 THNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELL 434
           THNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDSGK+LL
Sbjct: 77  THNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDSGKDLL 136

Query: 435 CTVLKSCGEECVIAVKANTALDK 503
           CTVLK+CGEECVIA+K NTALDK
Sbjct: 137 CTVLKACGEECVIAIKTNTALDK 159



 Score =  141 bits (342), Expect = 8e-34
 Identities = 64/77 (83%), Positives = 70/77 (90%)
 Frame = +1

Query: 25  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 204
           M +++D  FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 205 VGIDIFNGKKYEDICPS 255
           VGIDIF+ KKYEDICPS
Sbjct: 60  VGIDIFSNKKYEDICPS 76


>AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic
           initiation factor 5A protein.
          Length = 159

 Score =  146 bits (354), Expect = 3e-35
 Identities = 65/83 (78%), Positives = 75/83 (90%)
 Frame = +3

Query: 255 THNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELL 434
           THNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDSGK+LL
Sbjct: 77  THNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDSGKDLL 136

Query: 435 CTVLKSCGEECVIAVKANTALDK 503
           CTVLK+CGEECVIA+K NTALDK
Sbjct: 137 CTVLKACGEECVIAIKTNTALDK 159



 Score =  144 bits (350), Expect = 8e-35
 Identities = 65/77 (84%), Positives = 71/77 (92%)
 Frame = +1

Query: 25  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 204
           M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 205 VGIDIFNGKKYEDICPS 255
           VGIDIF+ KKYEDICPS
Sbjct: 60  VGIDIFSNKKYEDICPS 76


>AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB,
           isoform B protein.
          Length = 159

 Score =  146 bits (354), Expect = 3e-35
 Identities = 65/83 (78%), Positives = 75/83 (90%)
 Frame = +3

Query: 255 THNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELL 434
           THNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDSGK+LL
Sbjct: 77  THNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDSGKDLL 136

Query: 435 CTVLKSCGEECVIAVKANTALDK 503
           CTVLK+CGEECVIA+K NTALDK
Sbjct: 137 CTVLKACGEECVIAIKTNTALDK 159



 Score =  141 bits (342), Expect = 8e-34
 Identities = 64/77 (83%), Positives = 70/77 (90%)
 Frame = +1

Query: 25  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 204
           M +++D  FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 205 VGIDIFNGKKYEDICPS 255
           VGIDIF+ KKYEDICPS
Sbjct: 60  VGIDIFSNKKYEDICPS 76


>AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA,
           isoform A protein.
          Length = 159

 Score =  146 bits (354), Expect = 3e-35
 Identities = 65/83 (78%), Positives = 75/83 (90%)
 Frame = +3

Query: 255 THNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELL 434
           THNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDSGK+LL
Sbjct: 77  THNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDSGKDLL 136

Query: 435 CTVLKSCGEECVIAVKANTALDK 503
           CTVLK+CGEECVIA+K NTALDK
Sbjct: 137 CTVLKACGEECVIAIKTNTALDK 159



 Score =  141 bits (342), Expect = 8e-34
 Identities = 64/77 (83%), Positives = 70/77 (90%)
 Frame = +1

Query: 25  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 204
           M +++D  FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 205 VGIDIFNGKKYEDICPS 255
           VGIDIF+ KKYEDICPS
Sbjct: 60  VGIDIFSNKKYEDICPS 76


>AY121665-1|AAM51992.1|  709|Drosophila melanogaster RE10861p
           protein.
          Length = 709

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 176 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 24
           P    D+S  +LH  P S T   L  + + +   A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602


>AE014296-2303|AAF49800.1|  709|Drosophila melanogaster CG10710-PA
           protein.
          Length = 709

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 176 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 24
           P    D+S  +LH  P S T   L  + + +   A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,866,860
Number of Sequences: 53049
Number of extensions: 733075
Number of successful extensions: 2565
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2561
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)