BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0785 (599 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_04_0003 - 14989160-14989445,14989673-14989807,14991418-149915... 29 3.8 11_01_0405 + 3079275-3079622,3079816-3079903,3081411-3081543,308... 28 6.6 09_04_0032 - 13953323-13955269 28 6.6 05_02_0053 - 6152204-6152329,6152817-6152981,6154698-6154883,615... 28 6.6 06_03_1174 - 28164003-28164350,28164504-28164680,28165147-28166178 27 8.7 >01_04_0003 - 14989160-14989445,14989673-14989807,14991418-14991508, 14991571-14991712,14991924-14992403,14992610-14993548 Length = 690 Score = 28.7 bits (61), Expect = 3.8 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -3 Query: 495 SPCLVITSTPCNNQASSSTAPSEPL 421 SP + PCN S+ST+P+ PL Sbjct: 64 SPSFMNDQIPCNTMKSASTSPASPL 88 >11_01_0405 + 3079275-3079622,3079816-3079903,3081411-3081543, 3081642-3082395 Length = 440 Score = 27.9 bits (59), Expect = 6.6 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -3 Query: 504 GPLSPCLVITSTPCNNQASSSTAPSEPLTILSAGL 400 GP C ++ S P ++ + T PS+P +IL+ L Sbjct: 251 GPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHSL 285 >09_04_0032 - 13953323-13955269 Length = 648 Score = 27.9 bits (59), Expect = 6.6 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -3 Query: 513 MCSGPLSPCLVITSTPCNNQASSSTAPSEP 424 +C GPLSPC TS P + + S P P Sbjct: 223 LCGGPLSPC-TNTSPPSPSPSPSPPIPPPP 251 >05_02_0053 - 6152204-6152329,6152817-6152981,6154698-6154883, 6155055-6155078,6155649-6155822 Length = 224 Score = 27.9 bits (59), Expect = 6.6 Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 1/32 (3%) Frame = -3 Query: 501 PLSPCLVIT-STPCNNQASSSTAPSEPLTILS 409 PL LV+T STP + ASSST+PS P +LS Sbjct: 7 PLPRRLVVTASTPACSSASSSTSPS-PHCLLS 37 >06_03_1174 - 28164003-28164350,28164504-28164680,28165147-28166178 Length = 518 Score = 27.5 bits (58), Expect = 8.7 Identities = 25/109 (22%), Positives = 49/109 (44%) Frame = -3 Query: 576 VTFQQWXXXXXXXXXXXTSLEMCSGPLSPCLVITSTPCNNQASSSTAPSEPLTILSAGLQ 397 + F +W ++L +CS L+ CL++ S P + + ++ L LQ Sbjct: 314 MVFGKWAQDALSKLSNLSNLTICSNSLTACLIVPSLP-DEERTTQLKWLGGFRRLKE-LQ 371 Query: 396 ALIYIFLNLTSLFDMY*SLYIFLGMLISSLTDMYLYITVMRTKIQRLSR 250 L++ + ++FD+Y L F +LT ++L + +R +Q R Sbjct: 372 LLMF-DIKTINVFDIYAFLQSF---HFPNLTKLFLQLPRIREDVQEAVR 416 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,294,077 Number of Sequences: 37544 Number of extensions: 258868 Number of successful extensions: 687 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 668 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 687 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1435654836 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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