Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0785
         (599 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens ...    31   2.3  
BC126212-1|AAI26213.1|  547|Homo sapiens beta-carotene 15,15'-mo...    31   3.1  
BC126210-1|AAI26211.1|  547|Homo sapiens beta-carotene 15,15'-mo...    31   3.1  
AK001592-1|BAA91776.1|  547|Homo sapiens protein ( Homo sapiens ...    31   3.1  
AF294900-1|AAG15380.1|  547|Homo sapiens beta, beta-carotene 15,...    31   3.1  

>AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26336 fis, clone HRT02842. ).
          Length = 236

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 439 CTF*TSHYIISWIASSHIYLSKLNITF*YVLIFIY 335
           C F ++H  I     +H+Y+S    T  Y+ +FIY
Sbjct: 145 CVFTSTHACICVFTCTHVYISVFTCTHVYICVFIY 179


>BC126212-1|AAI26213.1|  547|Homo sapiens beta-carotene
           15,15'-monooxygenase 1 protein.
          Length = 547

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +2

Query: 323 IPKKIYKDQYISKSDVKFRKIYMRACNPADNIVRGSEGAVDEDAWLLHGVLVIT 484
           IP KI K   ++KS +K+R+     C PA+ +   + GA DED  ++   +V T
Sbjct: 431 IPTKIIKYDILTKSSLKWRE---DDCWPAEPLFVPAPGAKDEDDGVILSAIVST 481


>BC126210-1|AAI26211.1|  547|Homo sapiens beta-carotene
           15,15'-monooxygenase 1 protein.
          Length = 547

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +2

Query: 323 IPKKIYKDQYISKSDVKFRKIYMRACNPADNIVRGSEGAVDEDAWLLHGVLVIT 484
           IP KI K   ++KS +K+R+     C PA+ +   + GA DED  ++   +V T
Sbjct: 431 IPTKIIKYDILTKSSLKWRE---DDCWPAEPLFVPAPGAKDEDDGVILSAIVST 481


>AK001592-1|BAA91776.1|  547|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10730 fis, clone NT2RP3001307. ).
          Length = 547

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +2

Query: 323 IPKKIYKDQYISKSDVKFRKIYMRACNPADNIVRGSEGAVDEDAWLLHGVLVIT 484
           IP KI K   ++KS +K+R+     C PA+ +   + GA DED  ++   +V T
Sbjct: 431 IPTKIIKYDILTKSSLKWRE---DDCWPAEPLFVPAPGAKDEDDGVILSAIVST 481


>AF294900-1|AAG15380.1|  547|Homo sapiens beta, beta-carotene
           15,15'- dioxygenase protein.
          Length = 547

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +2

Query: 323 IPKKIYKDQYISKSDVKFRKIYMRACNPADNIVRGSEGAVDEDAWLLHGVLVIT 484
           IP KI K   ++KS +K+R+     C PA+ +   + GA DED  ++   +V T
Sbjct: 431 IPTKIIKYDILTKSSLKWRE---DDCWPAEPLFVPAPGAKDEDDGVILSAIVST 481


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,789,400
Number of Sequences: 237096
Number of extensions: 1622695
Number of successful extensions: 7539
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7537
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)