Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0784
         (675 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_47984| Best HMM Match : No HMM Matches (HMM E-Value=.)              49   3e-06
SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35)                  32   0.49 
SB_37524| Best HMM Match : p450 (HMM E-Value=0)                        30   2.0  
SB_51502| Best HMM Match : TPR_2 (HMM E-Value=0)                       30   2.0  
SB_18706| Best HMM Match : Transposase_11 (HMM E-Value=0.44)           29   2.6  
SB_37363| Best HMM Match : TPR_2 (HMM E-Value=0)                       29   4.5  
SB_4909| Best HMM Match : TPR_2 (HMM E-Value=0)                        29   4.5  
SB_29141| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.5  

>SB_47984| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 231

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 22/26 (84%), Positives = 25/26 (96%)
 Frame = +1

Query: 502 QKTAIKLEKLDTDLKNYKTNSIKESI 579
           +K A+KLEKLDTDLKNYK+NSIKESI
Sbjct: 16  KKAALKLEKLDTDLKNYKSNSIKESI 41


>SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35)
          Length = 1208

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 18/65 (27%), Positives = 34/65 (52%)
 Frame = +3

Query: 342  LKMAISYVMTTYNVNLYHTLHKKLSEAVASAGLPDIAGSQDIPVLDTIWVESKTKNCHKT 521
            L  AI+Y++  +N  +   LHK++ + +     P ++  ++IPVL+    E  T  C   
Sbjct: 1077 LSWAIAYLL--HNPGVQARLHKEIDQVIGRDVSPKLSQRKNIPVLEAFTAE--THACRIY 1132

Query: 522  GKARY 536
             ++RY
Sbjct: 1133 SRSRY 1137


>SB_37524| Best HMM Match : p450 (HMM E-Value=0)
          Length = 362

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/52 (23%), Positives = 29/52 (55%)
 Frame = +3

Query: 342 LKMAISYVMTTYNVNLYHTLHKKLSEAVASAGLPDIAGSQDIPVLDTIWVES 497
           L  A+ Y++  +N ++   LHK++ + +     P ++  +++PVL+    E+
Sbjct: 177 LGWAVIYLL--HNPDVQERLHKEIDDVIGRDAFPQLSKRKELPVLEAFTAET 226


>SB_51502| Best HMM Match : TPR_2 (HMM E-Value=0)
          Length = 1161

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 565 IKESIRRGHDDLGDHYLDCGDLTSALKCYSRARDYC 672
           ++++++   ++LG  Y   GD   A KCY +  D C
Sbjct: 448 LQQNVQPNLEELGLLYAKSGDFNEASKCYEKLLDLC 483


>SB_18706| Best HMM Match : Transposase_11 (HMM E-Value=0.44)
          Length = 248

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 514 IKLEKLDTDLKNY-KTNSIKESIRRGHDDLGDHYLDCGDLTSALKC 648
           I +E L  D+ NY K    K++++ G  D+G  Y+ C  L + L C
Sbjct: 181 ISVEWLFADIINYFKFLDFKKNLKIGLSDVGKMYMVCALLRNGLTC 226


>SB_37363| Best HMM Match : TPR_2 (HMM E-Value=0)
          Length = 936

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 571 ESIRRGHDDLGDHYLDCGDLTSALKCYSRARDYC 672
           E+++    +LG  Y   GD   A KCY +  D C
Sbjct: 571 ENVQPNLGELGVLYTKSGDFNEANKCYEKQLDLC 604


>SB_4909| Best HMM Match : TPR_2 (HMM E-Value=0)
          Length = 1307

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 571 ESIRRGHDDLGDHYLDCGDLTSALKCYSRARDYC 672
           E+++    +LG  Y   GD   A KCY +  D C
Sbjct: 614 ENVQPNLAELGGLYTKSGDFNEANKCYEKLLDSC 647


>SB_29141| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1331

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 571 ESIRRGHDDLGDHYLDCGDLTSALKCYSRARDYC 672
           E+++    +LG  Y   GD   A KCY +  D C
Sbjct: 622 ENVQPNLGELGVLYTKSGDFNEANKCYEKQLDLC 655


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,727,020
Number of Sequences: 59808
Number of extensions: 394802
Number of successful extensions: 970
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)