BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0784 (675 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL132895-1|CAC14399.1| 601|Caenorhabditis elegans Hypothetical ... 51 9e-07 U53153-7|AAC69037.1| 1280|Caenorhabditis elegans Hypothetical pr... 29 4.0 AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical ... 29 4.0 AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical ... 28 5.3 L16621-6|AAA28229.1| 67|Caenorhabditis elegans Hypothetical pr... 28 7.0 AC024770-1|AAF59482.1| 261|Caenorhabditis elegans Hypothetical ... 27 9.2 >AL132895-1|CAC14399.1| 601|Caenorhabditis elegans Hypothetical protein Y59A8A.1 protein. Length = 601 Score = 50.8 bits (116), Expect = 9e-07 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%) Frame = +1 Query: 523 EKLDTDLKNYKTNSIKESIRRGHDDLGDHYLDCGDLTSALKCYSRA-RDYCT 675 ++L + K +K +KES RR +DL HY+ G + A++ YSR RDYCT Sbjct: 179 DQLQAEYKRHKDEGVKESTRRAMEDLFQHYMMAGKIDEAIRLYSRGIRDYCT 230 Score = 39.5 bits (88), Expect = 0.002 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Frame = +3 Query: 261 AASYTGFAKLYRLMFVADHCPSLRLEALKMAISYVMT-TYNVNLYHTLHKKLSEAVASAG 437 A SY A R F+A HCP LR +A I+Y+ T ++ Y +L +A Sbjct: 90 ACSYDSNAFFLRARFIARHCPILRADAYISLINYLKEHTTDITHYVAFFNELESELARKE 149 Query: 438 LPDIAGSQDIPVLDTIWVE 494 + + IP+ D W+E Sbjct: 150 FKNRQLNFQIPLRDQKWIE 168 >U53153-7|AAC69037.1| 1280|Caenorhabditis elegans Hypothetical protein T19A5.1 protein. Length = 1280 Score = 28.7 bits (61), Expect = 4.0 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = -3 Query: 193 LGEYQPALVQLCSFRTLLEGFRPFLMKIREIYC 95 +G+YQ AL S +L F+P KIR IYC Sbjct: 1240 IGDYQRALNFYYSTLSLQANFQPAKDKIRTIYC 1272 >AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical protein Y56A3A.4 protein. Length = 342 Score = 28.7 bits (61), Expect = 4.0 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = +1 Query: 133 NPPIMFEMNTAEPMQVDIPPEDNEN-NETE 219 NP I ++T PMQ IPP+ ++N NE + Sbjct: 21 NPQIAAALSTNSPMQQGIPPQGHQNPNEQQ 50 >AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical protein Y70G10A.3 protein. Length = 690 Score = 28.3 bits (60), Expect = 5.3 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = -2 Query: 200 LSSGGISTCIGSAVFISNIIGGF*AFFNENTRNLLSTMKTNSS 72 LS+ CI +F S II GF AF + LLST T +S Sbjct: 329 LSNPTFLVCIFVGIFESIIINGFAAFMPKILETLLSTNPTLAS 371 >L16621-6|AAA28229.1| 67|Caenorhabditis elegans Hypothetical protein ZK688.4 protein. Length = 67 Score = 27.9 bits (59), Expect = 7.0 Identities = 21/60 (35%), Positives = 27/60 (45%) Frame = -2 Query: 227 T*HSVSLFSLSSGGISTCIGSAVFISNIIGGF*AFFNENTRNLLSTMKTNSSENRNFTTL 48 T HSVS F + S I + SAV ++ FF E R ST N+N TT+ Sbjct: 9 TVHSVSNFYIFSSTI--LLTSAVILAIFFFFGDGFFREKYRREFSTNSKEKDGNKNLTTV 66 >AC024770-1|AAF59482.1| 261|Caenorhabditis elegans Hypothetical protein Y39H10A.4 protein. Length = 261 Score = 27.5 bits (58), Expect = 9.2 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +1 Query: 94 DSKFRVFSLKKA*NPPIMFEMNTAEPMQVDIPP 192 D +FRV + ++ NP +F++ P+ V +PP Sbjct: 100 DYQFRVIIVIRSSNPAAVFDIIRPRPIPVQLPP 132 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,968,893 Number of Sequences: 27780 Number of extensions: 316391 Number of successful extensions: 859 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 839 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 859 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1529108810 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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