Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0784
         (675 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    24   1.2  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   2.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   6.1  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   6.1  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   8.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.1  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 279 NQYMTQRMFQIQGGVFNDVAFRLIVFIIFWGNIN 178
           N+YM     ++Q  + ND  F  + F I   N+N
Sbjct: 542 NEYMMALSMKLQKFINNDYNFNEVNFRILGANVN 575


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 291 KVLQNQYMTQRMFQIQGGVFNDVAFRLIVFIIFWGNIN 178
           ++ +N+YM     ++Q  V ND  F  + F I   N+N
Sbjct: 372 RIHKNEYMLALSNRMQKIVNNDFNFDEVNFRILGANVN 409


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 327 LRLEALKMAISYVMTTYNVNL 389
           LRL+A +  ++Y   TY +N+
Sbjct: 487 LRLKARRACMNYERFTYKINI 507


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 327 LRLEALKMAISYVMTTYNVNL 389
           LRL+A +  ++Y   TY +N+
Sbjct: 487 LRLKARRACMNYERFTYKINI 507


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 202 ENNETECYVVENPTLDLEHTLRHILVLQNF 291
           +N + E Y +  P +D+E  L    VLQNF
Sbjct: 567 DNIKKEIYDIL-PEVDVEEILGEAKVLQNF 595


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 114 KYAKFTVNDEN 82
           +Y K+T+NDE+
Sbjct: 233 RYTKYTINDES 243


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
 Frame = +1

Query: 544  KNYKTNSIKESIRRGHDDL---GDHYLDCGDLTSALKCY 651
            K Y  + I+    + +D L   G H+  CGD T A   Y
Sbjct: 1044 KTYVQDLIQAEASQIYDMLVYEGGHFYVCGDCTMAEDVY 1082


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,743
Number of Sequences: 438
Number of extensions: 3999
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)