Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0783
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.039
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   6.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 0.039
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
 Frame = -2

Query: 532 LSFLVSSKFYLVILLVLETFVFYFDQNV--TL*FFFLNVLRMPHWWTLLIHCMFAAEILI 359
           L FL+   ++ + LL L    +++   +  T+   F  VL +     L I+  + A IL 
Sbjct: 193 LLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLII----LLCIYYFYYAFILF 248

Query: 358 SCYRFLLICIIFFWVGI*SFCLIY 287
           + +  LL+CI +F+     FC  +
Sbjct: 249 TVHLLLLVCIYYFYYMHLLFCCAF 272



 Score = 25.8 bits (54), Expect = 0.37
 Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
 Frame = -2

Query: 532 LSFLVSSKFYLVILLVLETFVFYFDQNV--TL*FFFLNVLRMPHWWTLLIHCMFAAEIL- 362
           L FL+ S ++ V LL    F+ +    +  T  F++  ++ +  ++      +F   +L 
Sbjct: 70  LLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLF 129

Query: 361 -ISCYRFL-----LICIIFFWVGI*SFCLIYNFLPVLRHSFVFFL 245
            +  Y F+     L+CI +F+     F +   FL  + H F  F+
Sbjct: 130 LLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFI 174



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 291 YTIFCLFFDIHLSFFCGIV 235
           Y+ F + F IHL F+C ++
Sbjct: 216 YSAF-IIFTIHLLFYCVLI 233


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -1

Query: 452 CDFIIFLFECFENASLVDTVDTLHVCC*DTDFVLSLSVNL 333
           C   IFLF  + N S++ TV        D D   +L  NL
Sbjct: 77  CTEKIFLFAIYTNLSILTTVTIFKSAFWDVDKWRTLFTNL 116


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 66  IKVFVFFKQLHSSNGILQLLLLKPRKIHSAQY 161
           I  + F+K+ + S  +  L LLK RKI    Y
Sbjct: 69  ILAYNFWKKKYWSEFLANLKLLKGRKIRKNLY 100


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -2

Query: 535 ILSFLVSSKFYLVILLVLETFVFYFDQNVTL*FFFLNV 422
           + SFL  + FY +I  V E+F  +    +   ++F+++
Sbjct: 290 LTSFL--NNFYFIIFQVFESFYLHKATTLETVYYFISL 325


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,301
Number of Sequences: 336
Number of extensions: 3556
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)