Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0783
         (746 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0230 + 21717225-21717301,21717888-21717972,21718045-217181...    29   3.0  
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575...    29   5.2  
03_05_0968 + 29277122-29277445,29278389-29278505,29278957-292791...    28   9.1  

>09_06_0230 + 21717225-21717301,21717888-21717972,21718045-21718165,
            21718244-21718368,21718940-21718984,21719082-21719345,
            21720067-21720111,21720182-21720212,21721644-21721693,
            21722433-21724310,21724406-21724564,21724821-21724939,
            21726917-21727059,21727670-21727735,21728184-21728317,
            21728454-21728591,21728927-21729186,21729295-21729406,
            21730727-21730909
          Length = 1344

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
 Frame = +1

Query: 208  GTIAI*YSGNYSAKKRQMNVEEQAENC---ILNKNFKSPPKKKLCKLTESDNTKSVSQQQ 378
            G   + YSG     K+  N+ +   N     L KNF    K++  K ++  +  S     
Sbjct: 1151 GPFKVLYSGKSQKTKQNKNIYDFLHNPEVQALEKNFMDTYKQRTEKPSKQRSAFSSKGNA 1210

Query: 379  TCNVSTVSTNEAF 417
            T N  T+S N+ F
Sbjct: 1211 TINGGTISVNQKF 1223


>05_07_0112 - 27755604-27756449,27756624-27756887,27757428-27757532,
            27757626-27758249,27759048-27759596,27759665-27760372,
            27760449-27760658,27761266-27761421,27761524-27761664,
            27762015-27762101,27762209-27762309,27763071-27763293,
            27763384-27763548,27763621-27763713,27763801-27764292,
            27764729-27764805,27765184-27765681,27765818-27766046
          Length = 1855

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 543  LELLSQDIDFTQNNLRRDLFDSPLWKRLNDDQMKCNLNN 659
            +EL   D++ T  + R DLF   +WK  N+ Q  C + +
Sbjct: 1333 IELGRNDVEKTAISERADLFIKWMWKECNNHQPTCAMKH 1371


>03_05_0968 +
           29277122-29277445,29278389-29278505,29278957-29279114,
           29279678-29279727,29279968-29280161,29280867-29281049,
           29281152-29281270,29281383-29281522,29281857-29281937,
           29282286-29282389
          Length = 489

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 430 LNVLRMPHWWTLLIHCMFAAEI 365
           LN L+ P+W++  +HC F A I
Sbjct: 296 LNKLKPPYWFSAHLHCKFPAVI 317


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,155,240
Number of Sequences: 37544
Number of extensions: 286332
Number of successful extensions: 560
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)