Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0783
         (746 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83319-1|CAB05908.1|  322|Caenorhabditis elegans Hypothetical pr...    33   0.28 
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AC024791-31|AAF60655.1|  181|Caenorhabditis elegans Hypothetical...    30   2.0  
AF016685-16|AAG24152.2|  328|Caenorhabditis elegans Serpentine r...    29   3.5  
AF106591-1|AAD47131.2|  710|Caenorhabditis elegans Hypothetical ...    28   8.1  

>Z83319-1|CAB05908.1|  322|Caenorhabditis elegans Hypothetical
           protein T02D1.3 protein.
          Length = 322

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
 Frame = -2

Query: 493 LLVLETFVFYFDQNVTL*FFFLNVLRM-PHWWTLLIHCMFAAEILISC-YRFLLICIIFF 320
           L ++  F  YF+    L    L+VLR+ P  +      + +  +  S  + FL  CI  F
Sbjct: 110 LKIIFFFSIYFNYTAFLFPLLLSVLRLIPFNYPTRQKQLCSKVVEFSIPFIFLYPCIFTF 169

Query: 319 WVG-I*SFCLIYNFLPVLRHSFVFFLRNSFRNIKLR*YLI 203
            +      C  YN L    H +VFF+ N F N+KL  +L+
Sbjct: 170 TLNPALGLCRQYNVLYQFGHIYVFFINNWF-NVKLDNFLV 208


>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
           protein F52B5.3 protein.
          Length = 1425

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -3

Query: 624 VSSTVENQINLFSNYFE*NQYPVIIVPS 541
           +S+T+E  + LFSNYFE +   VI + S
Sbjct: 334 MSATIEGNMQLFSNYFENHSMDVIRIES 361


>AC024791-31|AAF60655.1|  181|Caenorhabditis elegans Hypothetical
           protein Y47G6A.3 protein.
          Length = 181

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +1

Query: 268 EEQAENCILNKNFKSPPKKKLCKLTESDNTKSVSQQQTCNVSTVS 402
           EE A+    +KN K+P K K+ K  ++  T   S  +T   STVS
Sbjct: 128 EEDAKTPKNSKNSKTPKKAKMPKNAKTPRTPKSSASKTPKASTVS 172


>AF016685-16|AAG24152.2|  328|Caenorhabditis elegans Serpentine
           receptor, class x protein1 protein.
          Length = 328

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 20/70 (28%), Positives = 40/70 (57%)
 Frame = -2

Query: 535 ILSFLVSSKFYLVILLVLETFVFYFDQNVTL*FFFLNVLRMPHWWTLLIHCMFAAEILIS 356
           IL  L+++ FYL   ++L +F+F  ++N  L   F++ + M  W+   I      +I+++
Sbjct: 56  ILHLLITT-FYLAPTIILNSFIFSDERNGNL-TVFISFIFMVLWYIGNI-----TQIVMA 108

Query: 355 CYRFLLICII 326
             R+ +ICI+
Sbjct: 109 VNRWAVICIL 118


>AF106591-1|AAD47131.2|  710|Caenorhabditis elegans Hypothetical
           protein T01A4.3 protein.
          Length = 710

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -1

Query: 323 FLGGDLKFLFNI-QFSACSSTFICLF 249
           FLGGD+KF +++      SS F C+F
Sbjct: 289 FLGGDMKFQYDVLGHQGASSQFHCMF 314


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,683,472
Number of Sequences: 27780
Number of extensions: 320074
Number of successful extensions: 943
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)