Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0781
(732 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91156-1|CAA62593.1| 573|Homo sapiens antimullerian hormone typ... 33 0.80
X89013-1|CAA61418.1| 573|Homo sapiens anti-mullerian hormone ty... 33 0.80
U29700-1|AAC50328.1| 573|Homo sapiens anti-mullerian hormone ty... 33 0.80
BC126316-1|AAI26317.1| 573|Homo sapiens anti-Mullerian hormone ... 33 0.80
AY714878-1|AAU21221.1| 478|Homo sapiens anti-Mullerian hormone ... 33 0.80
AK131318-1|BAD18481.1| 276|Homo sapiens protein ( Homo sapiens ... 33 0.80
AF172932-1|AAD48497.1| 573|Homo sapiens MIS type II receptor pr... 33 0.80
AB032254-1|BAA89211.1| 1878|Homo sapiens bromodomain adjacent to... 33 1.4
BC077728-1|AAH77728.1| 382|Homo sapiens zinc finger protein 787... 31 4.3
AF000560-1|AAB58413.1| 385|Homo sapiens TTF-I interacting pepti... 31 4.3
DQ104207-1|AAZ57203.1| 776|Homo sapiens HOOK3-RET fusion protei... 31 5.6
BC111690-1|AAI11691.1| 807|Homo sapiens SCUBE2 protein protein. 31 5.6
BC056146-1|AAH56146.1| 718|Homo sapiens hook homolog 3 (Drosoph... 31 5.6
BC048304-1|AAH48304.1| 597|Homo sapiens HOOK3 protein protein. 31 5.6
AF241830-1|AAK29204.1| 718|Homo sapiens golgi-associated microt... 31 5.6
BX284668-3|CAH70057.1| 1898|Homo sapiens ciliary rootlet coiled-... 30 7.4
BX284668-2|CAH70055.1| 2017|Homo sapiens ciliary rootlet coiled-... 30 7.4
BC126912-1|AAI26913.1| 1132|Homo sapiens CROCC protein protein. 30 7.4
BC126911-1|AAI26912.1| 1132|Homo sapiens CROCC protein protein. 30 7.4
AL049569-4|CAI20365.1| 1898|Homo sapiens ciliary rootlet coiled-... 30 7.4
AL049569-3|CAI20363.1| 2017|Homo sapiens ciliary rootlet coiled-... 30 7.4
AB007914-1|BAA32290.2| 1919|Homo sapiens KIAA0445 protein protein. 30 7.4
Y10658-1|CAA71668.1| 1270|Homo sapiens nuclear DNA helicase II p... 30 9.8
L13848-1|AAB48855.1| 1279|Homo sapiens RNA helicase A protein. 30 9.8
BC025245-1|AAH25245.1| 593|Homo sapiens Unknown (protein for IM... 30 9.8
BC014246-1|AAH14246.1| 599|Homo sapiens DHX9 protein protein. 30 9.8
BC008773-1|AAH08773.1| 596|Homo sapiens DHX9 protein protein. 30 9.8
BC000284-1|AAH00284.1| 613|Homo sapiens golgi associated, gamma... 30 9.8
AL662837-2|CAI19277.1| 1270|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 30 9.8
AL355999-1|CAH71701.1| 1270|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 30 9.8
AF233522-1|AAF35394.1| 613|Homo sapiens gamma-adaptin related p... 30 9.8
AF190863-1|AAF05708.1| 613|Homo sapiens ADP-ribosylation factor... 30 9.8
AF165531-1|AAF42806.1| 613|Homo sapiens VEAR protein protein. 30 9.8
AC002400-4|AAC05813.1| 613|Homo sapiens Gene product with simil... 30 9.8
AB029003-1|BAA83032.1| 517|Homo sapiens KIAA1080 protein protein. 30 9.8
>X91156-1|CAA62593.1| 573|Homo sapiens antimullerian hormone type
II receptor protein.
Length = 573
Score = 33.5 bits (73), Expect = 0.80
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 376 TEYPQAVPALPTPCRYA----TRQRKN*EAIRAC*VTNSPN*RNSIKYCEPCRRGHPGPG 543
TE P+A+ L + C + T+ R E ++ C ++ P + +C+P R HP PG
Sbjct: 47 TELPRAIRCLYSRCCFGIWNLTQDRAQVE-MQGCRDSDEPGCESL--HCDPSPRAHPSPG 103
Query: 544 DAL*EARWSTDAC 582
L TD C
Sbjct: 104 STLFTCSCGTDFC 116
>X89013-1|CAA61418.1| 573|Homo sapiens anti-mullerian hormone type
II receptor protein.
Length = 573
Score = 33.5 bits (73), Expect = 0.80
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 376 TEYPQAVPALPTPCRYA----TRQRKN*EAIRAC*VTNSPN*RNSIKYCEPCRRGHPGPG 543
TE P+A+ L + C + T+ R E ++ C ++ P + +C+P R HP PG
Sbjct: 47 TELPRAIRCLYSRCCFGIWNLTQDRAQVE-MQGCRDSDEPGCESL--HCDPSPRAHPSPG 103
Query: 544 DAL*EARWSTDAC 582
L TD C
Sbjct: 104 STLFTCSCGTDFC 116
>U29700-1|AAC50328.1| 573|Homo sapiens anti-mullerian hormone type
II receptor precursor protein.
Length = 573
Score = 33.5 bits (73), Expect = 0.80
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 376 TEYPQAVPALPTPCRYA----TRQRKN*EAIRAC*VTNSPN*RNSIKYCEPCRRGHPGPG 543
TE P+A+ L + C + T+ R E ++ C ++ P + +C+P R HP PG
Sbjct: 47 TELPRAIRCLYSRCCFGIWNLTQDRAQVE-MQGCRDSDEPGCESL--HCDPSPRAHPSPG 103
Query: 544 DAL*EARWSTDAC 582
L TD C
Sbjct: 104 STLFTCSCGTDFC 116
>BC126316-1|AAI26317.1| 573|Homo sapiens anti-Mullerian hormone
receptor, type II protein.
Length = 573
Score = 33.5 bits (73), Expect = 0.80
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 376 TEYPQAVPALPTPCRYA----TRQRKN*EAIRAC*VTNSPN*RNSIKYCEPCRRGHPGPG 543
TE P+A+ L + C + T+ R E ++ C ++ P + +C+P R HP PG
Sbjct: 47 TELPRAIRCLYSRCCFGIWNLTQDRAQVE-MQGCRDSDEPGCESL--HCDPSPRAHPSPG 103
Query: 544 DAL*EARWSTDAC 582
L TD C
Sbjct: 104 STLFTCSCGTDFC 116
>AY714878-1|AAU21221.1| 478|Homo sapiens anti-Mullerian hormone
receptor type II protein.
Length = 478
Score = 33.5 bits (73), Expect = 0.80
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 376 TEYPQAVPALPTPCRYA----TRQRKN*EAIRAC*VTNSPN*RNSIKYCEPCRRGHPGPG 543
TE P+A+ L + C + T+ R E ++ C ++ P + +C+P R HP PG
Sbjct: 47 TELPRAIRCLYSRCCFGIWNLTQDRAQVE-MQGCRDSDEPGCESL--HCDPSPRAHPSPG 103
Query: 544 DAL*EARWSTDAC 582
L TD C
Sbjct: 104 STLFTCSCGTDFC 116
>AK131318-1|BAD18481.1| 276|Homo sapiens protein ( Homo sapiens
cDNA FLJ16314 fis, clone SPLEN2030847, highly similar
to Mus musculus Kif21b (Kif21b) mRNA. ).
Length = 276
Score = 33.5 bits (73), Expect = 0.80
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -2
Query: 218 SPSSLEADNSLPPRDPTPTKASNSRLFLIFFPTLGGPEACTALPITNT 75
SPS+ A + PPR +PT A +S L P+L G + PI+ T
Sbjct: 91 SPSTHTAQSQTPPRPCSPTPAESSLDILPISPSLSGVTPVPSFPISPT 138
>AF172932-1|AAD48497.1| 573|Homo sapiens MIS type II receptor
protein.
Length = 573
Score = 33.5 bits (73), Expect = 0.80
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 376 TEYPQAVPALPTPCRYA----TRQRKN*EAIRAC*VTNSPN*RNSIKYCEPCRRGHPGPG 543
TE P+A+ L + C + T+ R E ++ C ++ P + +C+P R HP PG
Sbjct: 47 TELPRAIRCLYSRCCFGIWNLTQDRAQVE-MQGCRDSDEPGCESL--HCDPSPRAHPSPG 103
Query: 544 DAL*EARWSTDAC 582
L TD C
Sbjct: 104 STLFTCSCGTDFC 116
>AB032254-1|BAA89211.1| 1878|Homo sapiens bromodomain adjacent to zinc
finger domain 2A protein.
Length = 1878
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -2
Query: 236 VRLPQGSPSSLEADNSLPPRDPTPTKASNSRLFLIFFPTLGGPEACTALP 87
V P SP L+ S PP +P P +A +S F+ + C A P
Sbjct: 1260 VLTPDSSPGKLDPAPSQPPEEPEPDEAESSPDLQAFWFNISAQMPCNAAP 1309
>BC077728-1|AAH77728.1| 382|Homo sapiens zinc finger protein 787
protein.
Length = 382
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 69 SVCVSDGECGTRFWPAQGREE-DEEEAGIGRFSRCRISWGQ 188
SVC S CG ++ A G EE D++EA GR CR G+
Sbjct: 345 SVCSS---CGQSYYRAGGEEEDDDDEAAGGRCPECRAGEGR 382
>AF000560-1|AAB58413.1| 385|Homo sapiens TTF-I interacting peptide
20 protein.
Length = 385
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 69 SVCVSDGECGTRFWPAQGREE-DEEEAGIGRFSRCRISWGQ 188
SVC S CG ++ A G EE D++EA GR CR G+
Sbjct: 348 SVCSS---CGQSYYRAGGEEEDDDDEAAGGRCPECRAGEGR 385
>DQ104207-1|AAZ57203.1| 776|Homo sapiens HOOK3-RET fusion protein
protein.
Length = 776
Score = 30.7 bits (66), Expect = 5.6
Identities = 16/81 (19%), Positives = 39/81 (48%)
Frame = +2
Query: 440 RIERQYERAESQTRRIRGTASNTVSRVDAATQDLATLSKKLDGAPTLADTPMRLAELQRT 619
+++ Q E+ + +T R+ + R + ++++ L ++ D TLAD L +
Sbjct: 246 QLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADEAQSLKDEIDV 305
Query: 620 VAVFGSEIKSLDGSLQSAKNQ 682
+ ++ L+G ++S K +
Sbjct: 306 LRHSSDKVSKLEGQVESYKKK 326
>BC111690-1|AAI11691.1| 807|Homo sapiens SCUBE2 protein protein.
Length = 807
Score = 30.7 bits (66), Expect = 5.6
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 305 VSC--NSIMAFRGRAKTNRVASNGNGQSIHKQCQRYRRPADMPHGSERIERQYERAESQT 478
VSC N+ F G + ++ N + ++ CQ Y RP S+++ Q++ E +
Sbjct: 659 VSCPGNTTTDFDGSTNITQCKTSSNSVTTYETCQTYERPIAFTSRSKKLWIQFKSNEGNS 718
Query: 479 RR 484
R
Sbjct: 719 AR 720
>BC056146-1|AAH56146.1| 718|Homo sapiens hook homolog 3
(Drosophila) protein.
Length = 718
Score = 30.7 bits (66), Expect = 5.6
Identities = 16/81 (19%), Positives = 39/81 (48%)
Frame = +2
Query: 440 RIERQYERAESQTRRIRGTASNTVSRVDAATQDLATLSKKLDGAPTLADTPMRLAELQRT 619
+++ Q E+ + +T R+ + R + ++++ L ++ D TLAD L +
Sbjct: 246 QLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADEAQSLKDEIDV 305
Query: 620 VAVFGSEIKSLDGSLQSAKNQ 682
+ ++ L+G ++S K +
Sbjct: 306 LRHSSDKVSKLEGQVESYKKK 326
>BC048304-1|AAH48304.1| 597|Homo sapiens HOOK3 protein protein.
Length = 597
Score = 30.7 bits (66), Expect = 5.6
Identities = 16/81 (19%), Positives = 39/81 (48%)
Frame = +2
Query: 440 RIERQYERAESQTRRIRGTASNTVSRVDAATQDLATLSKKLDGAPTLADTPMRLAELQRT 619
+++ Q E+ + +T R+ + R + ++++ L ++ D TLAD L +
Sbjct: 246 QLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADEAQSLKDEIDV 305
Query: 620 VAVFGSEIKSLDGSLQSAKNQ 682
+ ++ L+G ++S K +
Sbjct: 306 LRHSSDKVSKLEGQVESYKKK 326
>AF241830-1|AAK29204.1| 718|Homo sapiens golgi-associated
microtubule-binding protein HOOK3 protein.
Length = 718
Score = 30.7 bits (66), Expect = 5.6
Identities = 16/81 (19%), Positives = 39/81 (48%)
Frame = +2
Query: 440 RIERQYERAESQTRRIRGTASNTVSRVDAATQDLATLSKKLDGAPTLADTPMRLAELQRT 619
+++ Q E+ + +T R+ + R + ++++ L ++ D TLAD L +
Sbjct: 246 QLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADEAQSLKDEIDV 305
Query: 620 VAVFGSEIKSLDGSLQSAKNQ 682
+ ++ L+G ++S K +
Sbjct: 306 LRHSSDKVSKLEGQVESYKKK 326
>BX284668-3|CAH70057.1| 1898|Homo sapiens ciliary rootlet
coiled-coil, rootletin protein.
Length = 1898
Score = 30.3 bits (65), Expect = 7.4
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 336 DVRRQIVSLRMEMDRVSTSSASVTDALQICHTAAKELRGNTSVLSHKLAELEE 494
++RRQ L E + A V L+ H ++L G SVL+ +L E+ E
Sbjct: 516 ELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVRE 568
>BX284668-2|CAH70055.1| 2017|Homo sapiens ciliary rootlet
coiled-coil, rootletin protein.
Length = 2017
Score = 30.3 bits (65), Expect = 7.4
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 336 DVRRQIVSLRMEMDRVSTSSASVTDALQICHTAAKELRGNTSVLSHKLAELEE 494
++RRQ L E + A V L+ H ++L G SVL+ +L E+ E
Sbjct: 635 ELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVRE 687
>BC126912-1|AAI26913.1| 1132|Homo sapiens CROCC protein protein.
Length = 1132
Score = 30.3 bits (65), Expect = 7.4
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 336 DVRRQIVSLRMEMDRVSTSSASVTDALQICHTAAKELRGNTSVLSHKLAELEE 494
++RRQ L E + A V L+ H ++L G SVL+ +L E+ E
Sbjct: 498 ELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVRE 550
>BC126911-1|AAI26912.1| 1132|Homo sapiens CROCC protein protein.
Length = 1132
Score = 30.3 bits (65), Expect = 7.4
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 336 DVRRQIVSLRMEMDRVSTSSASVTDALQICHTAAKELRGNTSVLSHKLAELEE 494
++RRQ L E + A V L+ H ++L G SVL+ +L E+ E
Sbjct: 498 ELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVRE 550
>AL049569-4|CAI20365.1| 1898|Homo sapiens ciliary rootlet
coiled-coil, rootletin protein.
Length = 1898
Score = 30.3 bits (65), Expect = 7.4
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 336 DVRRQIVSLRMEMDRVSTSSASVTDALQICHTAAKELRGNTSVLSHKLAELEE 494
++RRQ L E + A V L+ H ++L G SVL+ +L E+ E
Sbjct: 516 ELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVRE 568
>AL049569-3|CAI20363.1| 2017|Homo sapiens ciliary rootlet
coiled-coil, rootletin protein.
Length = 2017
Score = 30.3 bits (65), Expect = 7.4
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 336 DVRRQIVSLRMEMDRVSTSSASVTDALQICHTAAKELRGNTSVLSHKLAELEE 494
++RRQ L E + A V L+ H ++L G SVL+ +L E+ E
Sbjct: 635 ELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVRE 687
>AB007914-1|BAA32290.2| 1919|Homo sapiens KIAA0445 protein protein.
Length = 1919
Score = 30.3 bits (65), Expect = 7.4
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 336 DVRRQIVSLRMEMDRVSTSSASVTDALQICHTAAKELRGNTSVLSHKLAELEE 494
++RRQ L E + A V L+ H ++L G SVL+ +L E+ E
Sbjct: 537 ELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVRE 589
>Y10658-1|CAA71668.1| 1270|Homo sapiens nuclear DNA helicase II
protein.
Length = 1270
Score = 29.9 bits (64), Expect = 9.8
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -2
Query: 473 VTQHARIASQFFRCRVAYLQGVGNAGTACGYSVHFHS 363
VTQ RI++ RVA+ +G G +CGYSV F S
Sbjct: 442 VTQPRRISAVSVAERVAFERGE-EPGKSCGYSVRFES 477
>L13848-1|AAB48855.1| 1279|Homo sapiens RNA helicase A protein.
Length = 1279
Score = 29.9 bits (64), Expect = 9.8
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -2
Query: 473 VTQHARIASQFFRCRVAYLQGVGNAGTACGYSVHFHS 363
VTQ RI++ RVA+ +G G +CGYSV F S
Sbjct: 442 VTQPRRISAVSVAERVAFERGE-EPGKSCGYSVRFES 477
>BC025245-1|AAH25245.1| 593|Homo sapiens Unknown (protein for
IMAGE:5021788) protein.
Length = 593
Score = 29.9 bits (64), Expect = 9.8
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -2
Query: 473 VTQHARIASQFFRCRVAYLQGVGNAGTACGYSVHFHS 363
VTQ RI++ RVA+ +G G +CGYSV F S
Sbjct: 442 VTQPRRISAVSVAERVAFERGE-EPGKSCGYSVRFES 477
>BC014246-1|AAH14246.1| 599|Homo sapiens DHX9 protein protein.
Length = 599
Score = 29.9 bits (64), Expect = 9.8
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -2
Query: 473 VTQHARIASQFFRCRVAYLQGVGNAGTACGYSVHFHS 363
VTQ RI++ RVA+ +G G +CGYSV F S
Sbjct: 442 VTQPRRISAVSVAERVAFERGE-EPGKSCGYSVRFES 477
>BC008773-1|AAH08773.1| 596|Homo sapiens DHX9 protein protein.
Length = 596
Score = 29.9 bits (64), Expect = 9.8
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -2
Query: 473 VTQHARIASQFFRCRVAYLQGVGNAGTACGYSVHFHS 363
VTQ RI++ RVA+ +G G +CGYSV F S
Sbjct: 442 VTQPRRISAVSVAERVAFERGE-EPGKSCGYSVRFES 477
>BC000284-1|AAH00284.1| 613|Homo sapiens golgi associated, gamma
adaptin ear containing, ARF binding protein 2 protein.
Length = 613
Score = 29.9 bits (64), Expect = 9.8
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 383 IHKQCQRYRRPADMPHGSERIERQYERAESQTRRIRGTASNTVSRVDAATQDL 541
+ + YRRP P E ++ YER E + AS+T DA + L
Sbjct: 245 LQEMLSMYRRPGQAPPDQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEIL 297
>AL662837-2|CAI19277.1| 1270|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 9 protein.
Length = 1270
Score = 29.9 bits (64), Expect = 9.8
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -2
Query: 473 VTQHARIASQFFRCRVAYLQGVGNAGTACGYSVHFHS 363
VTQ RI++ RVA+ +G G +CGYSV F S
Sbjct: 442 VTQPRRISAVSVAERVAFERGE-EPGKSCGYSVRFES 477
>AL355999-1|CAH71701.1| 1270|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 9 protein.
Length = 1270
Score = 29.9 bits (64), Expect = 9.8
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -2
Query: 473 VTQHARIASQFFRCRVAYLQGVGNAGTACGYSVHFHS 363
VTQ RI++ RVA+ +G G +CGYSV F S
Sbjct: 442 VTQPRRISAVSVAERVAFERGE-EPGKSCGYSVRFES 477
>AF233522-1|AAF35394.1| 613|Homo sapiens gamma-adaptin related
protein, GGA2 protein.
Length = 613
Score = 29.9 bits (64), Expect = 9.8
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 383 IHKQCQRYRRPADMPHGSERIERQYERAESQTRRIRGTASNTVSRVDAATQDL 541
+ + YRRP P E ++ YER E + AS+T DA + L
Sbjct: 245 LQEMLSMYRRPGQAPPDQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEIL 297
>AF190863-1|AAF05708.1| 613|Homo sapiens ADP-ribosylation factor
binding protein GGA2 protein.
Length = 613
Score = 29.9 bits (64), Expect = 9.8
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 383 IHKQCQRYRRPADMPHGSERIERQYERAESQTRRIRGTASNTVSRVDAATQDL 541
+ + YRRP P E ++ YER E + AS+T DA + L
Sbjct: 245 LQEMLSMYRRPGQAPPDQEALQVVYERCEKLRPTLFWLASDTTDDDDALAEIL 297
>AF165531-1|AAF42806.1| 613|Homo sapiens VEAR protein protein.
Length = 613
Score = 29.9 bits (64), Expect = 9.8
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 383 IHKQCQRYRRPADMPHGSERIERQYERAESQTRRIRGTASNTVSRVDAATQDL 541
+ + YRRP P E ++ YER E + AS+T DA + L
Sbjct: 245 LQEMLSMYRRPGQAPPDQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEIL 297
>AC002400-4|AAC05813.1| 613|Homo sapiens Gene product with
similarity to KIAA0154 protein.
Length = 613
Score = 29.9 bits (64), Expect = 9.8
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 383 IHKQCQRYRRPADMPHGSERIERQYERAESQTRRIRGTASNTVSRVDAATQDL 541
+ + YRRP P E ++ YER E + AS+T DA + L
Sbjct: 245 LQEMLSMYRRPGQAPPDQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEIL 297
>AB029003-1|BAA83032.1| 517|Homo sapiens KIAA1080 protein protein.
Length = 517
Score = 29.9 bits (64), Expect = 9.8
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 383 IHKQCQRYRRPADMPHGSERIERQYERAESQTRRIRGTASNTVSRVDAATQDL 541
+ + YRRP P E ++ YER E + AS+T DA + L
Sbjct: 149 LQEMLSMYRRPGQAPPDQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEIL 201
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,881,126
Number of Sequences: 237096
Number of extensions: 2530880
Number of successful extensions: 8960
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 8261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8950
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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